mRNA_P-littoralis_Contig137.77.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 125 bits (314), Expect = 9.520e-32 Identity = 68/165 (41.21%), Postives = 86/165 (52.12%), Query Frame = 1
Query: 1 EECDYDGGDCCECHCQDGDFECSDNVYFPCKDPDANRTCEEYPGCSYERI------SWIGSGRCSDGMNNAECDYDGGDCCECECQQA---W--------CGSINSFTCLDPEADR------SCEAYPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDCE 426
EEC +DGGDCCEC C+DG++ C + C DPDA TC + + + + S IG+G C +NN +C YDGGDCCEC C + W G F C+DP+A + E C T IGN C + N+ EC YDGGDCCEC CE
Sbjct: 110 EECGFDGGDCCECTCEDGEYTCGQYYGYACIDPDA--TCVDDDAVTVDMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLCS---TGQIGNGYCDDSNNSPECAYDGGDCCECTCE 269
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 115 bits (289), Expect = 2.770e-27 Identity = 68/161 (42.24%), Postives = 84/161 (52.17%), Query Frame = 1
Query: 1 EECDYDGGDCCECHCQ---DGDFECSDNVYFPCKDPDANRTCEEYPGCSYERIS---W---IGSGRCSDGMNNAECDYDGGDCCECECQQA----WCGSINSFTCLDPEA------DRSCEAYPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDCE 426
E C YDGGDCCEC C+ D D+ C +N F C DP N C + + + + W IG G CS+ +N EC YDGGDCC C CQ W F C+DPEA D + + + C +G+ C + NNE CGYDGGDCCEC CE
Sbjct: 300 ELCAYDGGDCCECTCESLEDDDWACRNN--FACVDP--NAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQNDVDDDW--XXXXFACIDPEAACVNDDDITVDMFVNCE--YPVNVGDGWCDQGNNNEACGYDGGDCCECTCE 452
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 112 bits (281), Expect = 2.990e-26 Identity = 67/165 (40.61%), Postives = 81/165 (49.09%), Query Frame = 1
Query: 4 ECDYDGGDCCECHCQDGDFECSDNVYFPCKDPDANRTCEEYPGCSYERIS-----W-IGSGRCSDGMNNAECDYDGGDCCECECQQ---------AWCGSINSFTCLDPEA----DRSCEAY------PTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDC 423
EC+YDGGDCC C CQ+ ++C + F C DP A C + E + W IG G C N ECDYDGGDCC C CQ + CG F C+DP+A D A+ TC G + + C + NNEECGYDGGDCC C C
Sbjct: 50 ECEYDGGDCCSCTCQNDTYDCGVSG-FDCVDPSAE--CVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGN-IVHLADGDCDQINNNEECGYDGGDCCFCTC 210
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 112 bits (279), Expect = 6.270e-26 Identity = 67/155 (43.23%), Postives = 81/155 (52.26%), Query Frame = 1
Query: 13 YDGGDCCECHCQDGDFECSDNVYFPCKDPDA------NRTCEEYPGCSYER--ISWIGSGRCSDGMNNAECDYDGGDCCECECQQAW--CGSINSFTCLDPEA------DRSCEAYPTCM--GTRTTTIGNAICKEDLNNEECGYDGGDCCECDC 423
YDGGDCCEC C D F C F C DP A N T + C+ ++ IG G CSD NN CDYDGGDCCEC C A+ CG + +F C+DP A + + + +C G +GN C E N EEC YD GDCC+C C
Sbjct: 19 YDGGDCCECTCVDASFTCGYGG-FACIDPSAACVDDDNITEDIAESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAFYPCGYV-AFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTC 171
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 111 bits (278), Expect = 8.650e-26 Identity = 71/164 (43.29%), Postives = 82/164 (50.00%), Query Frame = 1
Query: 13 YDGGDCCECHC-----QDGDFECS-DNVYFPCKDPDANR------TCEEYPGCSYERISW-IGSGRCSDGMNNAECDYDGGDCCECECQQAW-------CGSINSFTCLDPEA------DRSCEAYPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDCE 426
YDGGDCCEC C D D+ CS D F C DPDA+ T E C +W +G G C NN C YDGGDCCEC C W C + N+ C+DP+A D + C R +G+ C ED NNE CGYDGGDCCEC CE
Sbjct: 21 YDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCD----TWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNA--CIDPDAPCVDDDDITAVMVEECGWVRG--VGDGWCDEDNNNELCGYDGGDCCECTCE 176
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 107 bits (266), Expect = 2.520e-25 Identity = 64/157 (40.76%), Postives = 78/157 (49.68%), Query Frame = 1
Query: 13 YDGGDCCECHC---QDGDFECSD-NVYFPCKDP------DANRTCEEYPGCSYERISWIGSGRCSDGMNNAECDYDGGDCCECECQQAWCGSIN---SFTCLDPEA------DRSCEAYPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDCE 426
+DGGDCCEC C D D+ CS + F C DP D + T E+ C G G C NN C YDGGDCCEC C AW + + C+DP A D + + C ++GN C E+ NNE CGYDGGDCCEC C+
Sbjct: 6 FDGGDCCECTCVSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNCFPREF---GDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCG--YVGSVGNGWCDEENNNEGCGYDGGDCCECTCQ 157
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 108 bits (271), Expect = 4.890e-25 Identity = 65/155 (41.94%), Postives = 80/155 (51.61%), Query Frame = 1
Query: 7 CDYDGGDCCECHCQDG-DFECSDNVYFPCKDPDA------NRTCEEYPGCSYERISWIGSGRCSDGMNNAECDYDGGDCCECECQQA----WCGSINSFTCLDPEA----DRSCEAYPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDCE 426
C YDGGDCCEC C+D + +C F C DP+A + T + C Y IG G C + NN C YDGGDCCEC C+ + W +F C+DP A D S + +T IG+ C E+LN EC YDGGDCC C CE
Sbjct: 8 CAYDGGDCCECTCEDTPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYP--GGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDW--HCRNFACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCE 158
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.360e-23 Identity = 66/165 (40.00%), Postives = 78/165 (47.27%), Query Frame = 1
Query: 7 CDYDGGDCCECHC---QDGDFECSD-NVYFPCKDPDANRTCE--EYPGCS-YERISWIGSGRCSDGMNNAECDYDGGDCCECECQQ--AW-----CGSINSFTCLDPEADRSCEA------------YPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDC 423
C +DGGDCC C C + D EC N + C+DPD C + C W G C D +N AEC YDGGDCC C C+ +W CG + CLDPEA SC +P C G IG+ C NNEEC +DGGDCC C C
Sbjct: 183 CGFDGGDCCACTCGMDAEVDHECGLLNDGYDCRDPDVPEDCNLANFAQCEGMNGYDWQ-DGYCDDDLNTAECGYDGGDCCRCTCRDYDSWGYYSSCGYYG-YDCLDPEAPSSCSTDSPTPSPAAGTDWPECEGY-LFEIGDGHCDYYNNNEECDWDGGDCCACTC 344
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.300e-23 Identity = 66/174 (37.93%), Postives = 79/174 (45.40%), Query Frame = 1
Query: 4 ECDYDGGDCCECHC-QDGDFECSDNVY-----FPCKDPDANRTCEE---------YPGCSYERISWIGSGRCSDGMNNAECDYDGGDCCECECQQ--AW----CGSINSFTCLDPEADRSCEA------------YPTCMGTRTTTIGNAICKEDLNNEECGYDGGDCCECDCE 426
EC +DGGDCC C C D D E + + C DPD C YP C W G C D +N A C YDGGDCC C C+ +W CG + C+DP+A +C +P C G IG+ C NNEECG+DGGDCC C CE
Sbjct: 87 ECGWDGGDCCACTCGADSDEELAHPCGQLGDGYNCLDPDVPDDCGVTPSPAAAIGYPDCEEYLYEWQ-DGVCDDNLNTAACGYDGGDCCRCTCRDYSSWGYSTCGYYG-YDCMDPDAPSACSTDSPTPSPAAGTDWPECEGY-IYMIGDGSCDYYNNNEECGWDGGDCCSCTCE 257
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Match: A0A6H5JX54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX54_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 5.230e-21 Identity = 53/122 (43.44%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 124 YPGCS---YERISWIGSGRCSDGMNNAECDYDGGDCCECEC----------------QQAWCGSINSFTCLDPEADRSCEAYPTCMGTRTTT--IGNAICKEDLNNEECGYDGGDCCECDCE 426
YP C+ Y S G C+ NNAEC YDGGDCCEC+C CG+ N + C+DP ++ + YP C+ T IGN C N EECGYDGGDCCECDCE
Sbjct: 130 YPNCTSLAYYDDSVPGDNYCNSYYNNAECGYDGGDCCECDCGTFGTSLDSSSSTSSSANFTCGA-NGYVCVDPASECFEDLYPDCVSRGGTLEWIGNGACYWGNNFEECGYDGGDCCECDCE 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig137.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig137.77.1 >prot_P-littoralis_Contig137.77.1 ID=prot_P-littoralis_Contig137.77.1|Name=mRNA_P-littoralis_Contig137.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=142bp EECDYDGGDCCECHCQDGDFECSDNVYFPCKDPDANRTCEEYPGCSYERIback to top mRNA from alignment at P-littoralis_Contig137:381827..384743- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig137.77.1 ID=mRNA_P-littoralis_Contig137.77.1|Name=mRNA_P-littoralis_Contig137.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2917bp|location=Sequence derived from alignment at P-littoralis_Contig137:381827..384743- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig137:381827..384743- >mRNA_P-littoralis_Contig137.77.1 ID=mRNA_P-littoralis_Contig137.77.1|Name=mRNA_P-littoralis_Contig137.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=426bp|location=Sequence derived from alignment at P-littoralis_Contig137:381827..384743- (Pylaiella littoralis U1_48)back to top |