mRNA_P-littoralis_Contig137.50.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig137.50.4
Unique NamemRNA_P-littoralis_Contig137.50.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig137.50.4 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 5.200e-127
Identity = 340/555 (61.26%), Postives = 373/555 (67.21%), Query Frame = 2 
Query:  476 MSSLT--PATGDDIDPLDAYMASLAGEITQQAPDTTTTPSSPPRRSTSSHRPQRPSTAQLELAEKVAASPFCDVLRDQRPGHRMTSSGVADSAAAAGSSGQHIDAVTVTGEATEACLRLLVNHPAEFLSRFGYILAPRDLESLLPSQDPVVALHVERLQTLMLSQHQRQQHEQPLALLSTDEDVDMPAVVDAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGRRAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQQLPNGAWPTGTPATTYTVAAASATVGSSGSRGAGSSLGMAFLSGLCADPGARYLMAGETVDFCDVPATSTQTPVATGVLSGSAGVPAPQERDPEDGAEEASTAAVTAAIEAIGIRDDGDAVGGVDVVVVGKDSASGGGDGRRVRFVDERGVDLDSVEGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQIARILSERFLAGLEKGVDYRSVDEDERLDDLEQLSRDEQDRWFRGED-DSSMDLI 2113
            MSS T  P+  DDIDPLDAYM SLA E+TQQA D T     PP  S SS   Q+PS AQLE+A+KVAASPFC+VL    P    +SS                       EA EACL+LL++ P EFLSRFG+IL P DLESLLPSQDP VALHV RL+TLMLSQ                             XXXXXXXXXXXXXXXXXXXXXXXXXXXX      VRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVG+ AGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQ+ PNG WPTG P      + A A           +SLGMAFLSG+CAD GAR + AGETVD  DVP  ++     T V   S G+P  +ER   +   +A  AAVTAA+ AIG++DDG      DV            DGRRVRF DE G D     G GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RE++ARILSERFLAGLE+GVDYRSVD DERLDDL+QLSRDEQDRWF GE+ D SMDL+
Sbjct:    1 MSSATNGPSGDDDIDPLDAYMDSLADEVTQQAEDDTV---QPPPWSPSS---QQPSPAQLEVADKVAASPFCNVL----PPATTSSS----------------------AEAAEACLKLLLHQPGEFLSRFGHILTPGDLESLLPSQDPAVALHVARLKTLMLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWPTGLP-----TSGAGAGXXXXXXXXXXTSLGMAFLSGVCADAGARDVAAGETVDSSDVPEAASSQAEVTAVPIAS-GMPDGRERHACEDDVDARAAAVTAAVGAIGLQDDGKKA---DV------------DGRRVRFSDEMGSD-----GGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----REEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDEQDRWFLGEEEDGSMDLV 492
[Close]
BLAST of mRNA_P-littoralis_Contig137.50.4 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5)

HSP 1 Score: 60.1 bits (144), Expect = 6.580e-6
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 2 
Query: 1136 VRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGR 1249
            VRNRRYRR+QQL + G +FS+EAMKER PWL+ ++VGR
Sbjct:   91 VRNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGR 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig137.50.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM87_ECTSI5.200e-12761.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F2TWH5_SALR56.580e-668.42DUF2052 domain-containing protein n=1 Tax=Salpingo... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig137contigP-littoralis_Contig137:249668..255624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog946362.XP_004998990.1
Preferred nameCCDC97
PFAMsDUF2052
Model size2879
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005686,GO:0030532,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0097525,GO:0120114,GO:1990904
Exons5
Evalue5.1e-07
EggNOG OGsKOG3044@1|root,KOG3044@2759|Eukaryota,39RMY@33154|Opisthokonta
Ec32 ortholog descriptionProtein of unknown function DUF2052, coiled-coil
Ec32 orthologEc-16_004690.1
DescriptionCoiled-coil domain containing protein (DUF2052)
Cds size1644
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig137.50.4prot_P-littoralis_Contig137.50.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig137 250428..255149 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789632.8576171-UTR-P-littoralis_Contig137:249667..2504271680789632.8576171-UTR-P-littoralis_Contig137:249667..250427Pylaiella littoralis U1_48UTRP-littoralis_Contig137 249668..250427 -
1680789632.9296148-UTR-P-littoralis_Contig137:255149..2556241680789632.9296148-UTR-P-littoralis_Contig137:255149..255624Pylaiella littoralis U1_48UTRP-littoralis_Contig137 255150..255624 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789632.87137-CDS-P-littoralis_Contig137:250427..2504811680789632.87137-CDS-P-littoralis_Contig137:250427..250481Pylaiella littoralis U1_48CDSP-littoralis_Contig137 250428..250481 -
1680789632.8854566-CDS-P-littoralis_Contig137:251067..2516361680789632.8854566-CDS-P-littoralis_Contig137:251067..251636Pylaiella littoralis U1_48CDSP-littoralis_Contig137 251068..251636 -
1680789632.8963559-CDS-P-littoralis_Contig137:252085..2522871680789632.8963559-CDS-P-littoralis_Contig137:252085..252287Pylaiella littoralis U1_48CDSP-littoralis_Contig137 252086..252287 -
1680789632.9061725-CDS-P-littoralis_Contig137:252983..2534221680789632.9061725-CDS-P-littoralis_Contig137:252983..253422Pylaiella littoralis U1_48CDSP-littoralis_Contig137 252984..253422 -
1680789632.9179986-CDS-P-littoralis_Contig137:254769..2551491680789632.9179986-CDS-P-littoralis_Contig137:254769..255149Pylaiella littoralis U1_48CDSP-littoralis_Contig137 254770..255149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig137.50.4

>prot_P-littoralis_Contig137.50.4 ID=prot_P-littoralis_Contig137.50.4|Name=mRNA_P-littoralis_Contig137.50.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=548bp
MSSLTPATGDDIDPLDAYMASLAGEITQQAPDTTTTPSSPPRRSTSSHRP
QRPSTAQLELAEKVAASPFCDVLRDQRPGHRMTSSGVADSAAAAGSSGQH
IDAVTVTGEATEACLRLLVNHPAEFLSRFGYILAPRDLESLLPSQDPVVA
LHVERLQTLMLSQHQRQQHEQPLALLSTDEDVDMPAVVDAGEAGAAGGGG
GDRGDGPGDGGRGGDSGGARVRNRRYRRLQQLAEGGVWFSDEAMKERDPW
LWFEYVGRRAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQQLPNGAW
PTGTPATTYTVAAASATVGSSGSRGAGSSLGMAFLSGLCADPGARYLMAG
ETVDFCDVPATSTQTPVATGVLSGSAGVPAPQERDPEDGAEEASTAAVTA
AIEAIGIRDDGDAVGGVDVVVVGKDSASGGGDGRRVRFVDERGVDLDSVE
GRGGGDDQNNSDAVYMQEEEEEDEEEGQEEEEEAVGGGGREQIARILSER
FLAGLEKGVDYRSVDEDERLDDLEQLSRDEQDRWFRGEDDSSMDLII*
back to top

mRNA from alignment at P-littoralis_Contig137:249668..255624-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig137.50.4 ID=mRNA_P-littoralis_Contig137.50.4|Name=mRNA_P-littoralis_Contig137.50.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5957bp|location=Sequence derived from alignment at P-littoralis_Contig137:249668..255624- (Pylaiella littoralis U1_48)
CCGAGAAGTAGCTCTCTGAGAGTACCGTTGCTCTTGAGGCAGTCTCGATC
TGTCTTTGCTGATAGCGCGCTCCAGGGAACACTGCCGCGTGTTTCGTCTG
AACCTGGCGCCCGCGGTCGAGAAAATTCAGTAGCCAAGCTTGGAGGAACA
ACGGGACAAACAAGGGGTGTTTACATACACAGCCTTCATTATCCAACACG
AGCTCACAGCTCCGAGCTGGAGATCCGCCAGGCAGGAGGGTCTCGCGTAG
GAGCAGTGCGAGTCAAAGGGTATAAGGAAATAAAATATACCCTTTGGAGC
GAGTGGTAAGCCTGACGTGGATCAAGTTCAGTCGATACGAGTACCGTGCT
GCGAAAGAGCTGGGGGAACCGGTGATATTTGATTCTGCTACCACCGTCTA
CCACCGCAAAGAGCTGTCTGCTGTGCAGAGTTTTGAGCACCAGCGAGCTG
TGACATCGAGCACGCGGCTTAAATCATGTCTTCGTTGACACCAGCCACCG
GGGATGACATCGATCCACTCGACGCCTACATGGCATCCCTCGCTGGCGAA
ATCACACAACAAGCACCCGACACCACCACCACTCCATCCTCACCCCCACG
CCGATCGACTTCATCGCACCGACCACAACGGCCATCAACGGCACAGCTTG
AGCTTGCGGAGAAGGTGGCCGCCAGTCCATTCTGCGACGTGCTGAGAGAT
CAAAGGCCGGGGCACCGCATGACGAGTAGCGGCGTCGCTGATTCCGCCGC
AGCTGCTGGCAGCAGTGGCCAGCATATTGACGCTGTTACTGTTACTGGCG
AGGCAACGGAGGCGTGCTTGAGGCTGCTGGTGAATCACCCGGCCGAGTTT
TTGAGGTGAGTGGCTACAAGCAGGTTTTTCTCTCGAGCAGTACGTGCCAT
ATGGTTGTTCAGCACGCCGCAAACTGTCTGCTGAAATGAGTCGGTACAGC
AGTACACTTTCTGGCACTAGTACGGCACACTCACACACAAACAAAACGCT
CAAGATTCTCTCTAGTAGACTGGACACGCGGACGGATGTTGGAAGTCCGT
GGGTGGACAGCTTATCGGAGACAAATGCCATGCGCGGACAGAAATCAGCA
AGTTTTGGCAGAAGTCGAGCTGTGCGAGAGGGTTTTGTGTCGAACGTCGG
CCACGCAGATTTGAGCTCAAGACTGCGGACATGCTCTGCTCCCAAGAGTT
ACCTCCAAGGTTGTAATGAGGAATGTGTCGACGACCGCAGCTCCGAACGC
CTCGAGTGCATCATCAAAGTCGACCTCGCTGCTGCCCCTCTACCAAGCGT
GACTCCCAATACGAACCTGGCAAAAAGAAAAAGCTAACTTTTACATGCTT
ATCGCTCATTTTTCGTTTTAGCGTTCGCGGATGTCTGGGGTCTGGGTATA
ACACCGCCCAACGTTTTGACCAGAAGTCGGCGCCGCACTAGCTCGCCAGT
CTCATTTCAGCGCTTTCCGTCGCACCTCCAGGCGCGCGATAGAGCGAGAG
GAAGCAGGTCACTCGTACAACAAGCTCGGGTCCTAAATGTTTTGGAGCTT
TATCGCGCCAGTGCTCTGTGTGTGCAGTCAGATATCCTACATGCAGTACA
CTATTTTGGGCAAATTCTCCCTCCCCTCGAACCTTTACAACAGGATGGTT
GTGTGCGTCGTGACTATCGAGGGCCTTGCTCTCCTTGATCGAGTGCTGGA
GCTCTTAATCAACCCTACGAGTAGATATGTCAAGAAACAGGACGATACAT
AGTACGTGCCCGATTCAGGGATTGTTGTTAGTCGGCTTGAGGAGTACTTT
CACCGGAATACTTAACTCAGGTGTCCTCCTGTGGCAACCAATGTACGTAC
TTCGTATGCTTAAACTCACCTGAGAGTGCCGATTTTTTCTCGTCTCTTTG
GTTGCTTGTACGTTGTGCGCATGGGGGAGGGGCGGGTCACATTTCTTTCG
CTTGCAGCGCTGATTTCTGTGGTCGTTTTTCGGCTTCTTCTCTTGTTCAT
AGGAATCGGTGGTACAATCGACTTCGATAGTACTCGCGCCCCCAAGAATC
GTCTTTATTGAACAACCAAGATCGTGCAGTGATACCGCAGTACTGCAGAT
ACCTGTTTCTGGTGTGAGGAAAACGTGCCTACACCCCCCCCCCCCCCCCC
CCACTCTTTTGAATCCGACACCAAACGCATCAATGCAAACCCCCTTTCAC
AGCCGATTTGGTTATATTCTCGCGCCTCGGGACCTGGAGTCTCTGCTCCC
TTCTCAAGACCCCGTCGTGGCCCTACACGTCGAGAGACTTCAAACCCTCA
TGCTGTCTCAACATCAACGCCAACAACACGAGCAACCACTTGCACTGCTG
TCAACCGACGAGGATGTGGACATGCCGGCAGTAGTAGACGCAGGAGAAGC
GGGGGCCGCTGGTGGTGGAGGGGGCGATCGAGGGGATGGTCCTGGCGACG
GGGGGCGGGGTGGAGATAGCGGCGGAGCCAGGGTGCGCAACCGCCGGTAT
CGGAGGCTGCAGCAGCTGGCGGAAGGAGGAGTTTGGTTCAGCGACGAGGC
GATGAAAGAGAGGGATCCCTGGCTGTGGTTTGAGTACGTGGGGAGGCGAG
CGGGGGAAGAGAAACCAGCGCCAAAGCAGGCGGTAGAAGAGGTGCGTCTG
GGATTGGCACTGTTCGTGGGGCTTGCGGGCGGGAGTGTGGGTTGGGGGGG
GTGTAGAGATACCGTGGATACCAAAAAGAAGCACCCGTATTCCAAAGTTT
TATCGAACTATGGATAAAGGTTGTGCATGCCGATTTGAGCTGTTTTTCTG
GCCAGAATAGCCGAAGGCGTAGGATTGTTTGCGCGAGTATGAAGTGAGCC
GGTGGTGATGCTATCGCCGTTCAGGTCGTGGTTGTAAGGTGGTCTGTTGT
TGATGACTGTCCGTGTCTTGAGTCCTTGAAATATGCTCAGCCTACAGTTC
CGCCACCGCGTCAACCCAGAAGAGACAAGGGGACGATGGACATCGCTCAA
GCATAACGCTGTTTCGTGCAGCAAGACTTACGTATTTTGTCGTAATTCGG
TTCGGACCCAGTGAGCTGAATTTGATGTTCCTGTCCGACCGCCCCCGCTC
ACCCCCCAAAAAGGCATGTCTAGGTTCCTTCCACCCCTGAATTTCATTCG
CTTAAATTTCGGCGTGTAGGCTGTGTGGCCGGCGTCAGCTCATTGTCTCG
TTGCAGACCGCAGTCCTAATTTTTGTAGCGTGCCAGTACACCCAAATAGC
AATGGTTCCGCGAGTAAGAAGCGCGCGAGTCGACGTTACCTTTCGTCTAA
CATCCTGATGCGCCTCTACATACGCCGCACGCCAAAGGTTCCCGGAAGCA
CGTCGGTGGGAACCTATCTCCAGGAAAGCTTGGGGTTCTTGTCTCAGCAG
CTACCAAACGGGGCATGGCCCACAGGCACGCCAGCTACCACTTACACGGT
TGCTGCTGCCTCTGCTACTGTCGGTTCAAGCGGTTCGAGAGGGGCGGGTT
CGTCGTTGGGGATGGCGTTTCTCTCCGGGCTCTGTGCGGGTGGGTTGGGT
TAAGACTAACGGAGAAGGGTTGGTGGGTGGGGCGTACACATCTCTTTAGG
ATGGGATGGGTTAAGATTAACAGAGAAGGGTTGGTGGATAGGGCGTTCAT
ATCTTTGGATTTGCGTTGTAGCATGGATTCGACAGGGAAGTGGTCCCGCG
TCTGCTTGAGCCACGGCCAGCAGGGAGCAGCTTTTCGCTGTACAAGGAAG
GTTGGGGTTCGGCGGACATTGCAGCAGAAACACGGCATATATACAAGTAT
GCGATTTGTGTGCTCAACTCACTTTGGTCTGCGTCAGACGCGGAACTGAT
TCAGGGCCAATGTACAACAATGGGTTTCGGGTTTATAATTATTAAAGGAT
GCGCCTGCTCCCCTCTACTTCCAGCACTTAACTTCGACCCACGGCCCCTG
CTAATAATTACATGAAAACGTAACACAAATGTCGGCAGATCCCGGAGCCC
GATACTTGATGGCGGGAGAAACCGTCGATTTTTGTGACGTTCCAGCAACG
TCAACACAGACACCAGTAGCAACAGGAGTTCTCAGCGGTTCCGCTGGCGT
GCCTGCTCCACAGGAACGGGATCCCGAAGATGGTGCGGAAGAAGCCAGCA
CAGCGGCAGTCACCGCGGCGATTGAAGCCATTGGTATTCGGGACGACGGG
GACGCGGTGGGAGGTGTCGATGTCGTTGTAGTTGGCAAAGACTCTGCGAG
TGGAGGGGGTGATGGACGCCGCGTCCGTTTCGTTGATGAACGGGGTGTGG
ATTTGGACAGCGTTGAGGGCCGGGGAGGTGGCGATGATCAAAACAACAGC
GACGCCGTGTACATGCAGGAGGAGGAGGAGGAGGATGAGGAAGAGGGGCA
GGAAGAAGAAGAGGAGGCGGTAGGGGGAGGGGGGCGCGAGCAGATTGCGC
GAATTTTGTCGGAGAGATTTTTGGCTGGATTGGAGAAAGGCGTGGACTAC
AGGAGCGTGGACGAAGACGAGCGACTTGATGACCTGGAACAGCTTTCAAG
GGATGAGGTGCGCGAATGAAGCTCGGGATATGTTTGCCAGGACTTCTTAT
TTCCCACCACCCGACCAAACACGTGTTCGTCAGTACTTTTTTCTGTTTTG
GGCGGGGCAGTCATTGAATTGAGCCCATATGACTACGCTTAAGCCGTGAG
TGTTGAACCTCAAGCGCCGAGCTGCCAAGTTACCTCTCTCCATGTACACT
GCTGTTCGTCAAAGATAGACCAGTTGAAAGTCGTCTGACATGAAGATTCA
TCGAGGACGAGAACGCCTGGTTTAAAGTTGGGCGTAGATTGCTGGTATCA
TAGCACCCTCACATCGGGAGCCTGGTCGGGCTCCCGAAACGTCGAAATCG
AGGCCCTTGGACACGTCAACATCCACACCTCGATACATGCGCATCACGGA
TTCCATGTAGATTCCTGCCGGACGCATGGTGGAGCTGGCTCTTGTATGCC
TCGTTTCCCTAAAGGTCTTTGTTCGTTATGACCACTTCCCCCAATCTGCC
AATCTGCCTTCCTCCTTTCAATGTTTGCGTTCTTACGTTATTGCTGTGCC
GTCCGCTACACCTTATCGCCGTGTGGTACTTCCCGTTTCGCAGCAAGATC
GCTGGTTCCGCGGCGAAGATGACAGCTCCATGGACTTGATTATTTAGGAA
GCGCCACAGCCGTCCCCGCTCTCAATGCTCGGCGAGCTCCGGCACTATAC
TGTACCTGGTACGTCGAACGAAATAGTTTCCGGTACAGTAGGGCAAGTCC
CGAAGCGAGGCTGTCTTGAAATCAACCGCACTATGATGCCCATTCAGTGG
TGATATTAAAGAGTCGTTTTGAGTGGAAGACGCGTACGCGCTTGCGATGC
CTGTGTCTTATGGGGAGGACGCGTTGTGAACCTTCTTCCAACTTTGTCTG
GTGCGCGGCTTGTTGTTATTGCAGCGTTTTTTTAGTGCGTTGCGACCAAC
CGCGGCTGCACGCTGCGCGTGCTTGCGCGCCTTTTGCTCGGTTGCGAGAT
CTCTTGCACGACAGCGGTAGTGGGCTTCACATGTTAAGTGGATACCGATG
CTGCCTGTGCGTGCTCTGGTGTTCCCACAGCAATAGTGAATGGTCCATTG
AGTCAGTGGAGTGAGGCCCACGAGTGCAGTAAAGCTTGCGAAACGTACAG
GGACAAGGTTTCCTTCTTTCTTGGCATTCGACCCTCGGGGGGGAGAAACC
CCGTGGGTACGTCGTGTGCGTTGTTGAGATAACCGATCTGGGTATTATCT
CGGCAGTAATGGTGGATGTGCGGATTATCCTTTAAAACCGAAGGGTAGAA
GGAAAAAACAACAGGATAGAGTTTAGGAAAACGATAATTATTTATTTTTG
AATAATAAAACGAAAGATGATTCATTTTTTCCATGTTGTGTTAACGAACA
AGCCTTC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig137:249668..255624-

>mRNA_P-littoralis_Contig137.50.4 ID=mRNA_P-littoralis_Contig137.50.4|Name=mRNA_P-littoralis_Contig137.50.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1644bp|location=Sequence derived from alignment at P-littoralis_Contig137:249668..255624- (Pylaiella littoralis U1_48)
ATGTCTTCGTTGACACCAGCCACCGGGGATGACATCGATCCACTCGACGC
CTACATGGCATCCCTCGCTGGCGAAATCACACAACAAGCACCCGACACCA
CCACCACTCCATCCTCACCCCCACGCCGATCGACTTCATCGCACCGACCA
CAACGGCCATCAACGGCACAGCTTGAGCTTGCGGAGAAGGTGGCCGCCAG
TCCATTCTGCGACGTGCTGAGAGATCAAAGGCCGGGGCACCGCATGACGA
GTAGCGGCGTCGCTGATTCCGCCGCAGCTGCTGGCAGCAGTGGCCAGCAT
ATTGACGCTGTTACTGTTACTGGCGAGGCAACGGAGGCGTGCTTGAGGCT
GCTGGTGAATCACCCGGCCGAGTTTTTGAGCCGATTTGGTTATATTCTCG
CGCCTCGGGACCTGGAGTCTCTGCTCCCTTCTCAAGACCCCGTCGTGGCC
CTACACGTCGAGAGACTTCAAACCCTCATGCTGTCTCAACATCAACGCCA
ACAACACGAGCAACCACTTGCACTGCTGTCAACCGACGAGGATGTGGACA
TGCCGGCAGTAGTAGACGCAGGAGAAGCGGGGGCCGCTGGTGGTGGAGGG
GGCGATCGAGGGGATGGTCCTGGCGACGGGGGGCGGGGTGGAGATAGCGG
CGGAGCCAGGGTGCGCAACCGCCGGTATCGGAGGCTGCAGCAGCTGGCGG
AAGGAGGAGTTTGGTTCAGCGACGAGGCGATGAAAGAGAGGGATCCCTGG
CTGTGGTTTGAGTACGTGGGGAGGCGAGCGGGGGAAGAGAAACCAGCGCC
AAAGCAGGCGGTAGAAGAGGTTCCCGGAAGCACGTCGGTGGGAACCTATC
TCCAGGAAAGCTTGGGGTTCTTGTCTCAGCAGCTACCAAACGGGGCATGG
CCCACAGGCACGCCAGCTACCACTTACACGGTTGCTGCTGCCTCTGCTAC
TGTCGGTTCAAGCGGTTCGAGAGGGGCGGGTTCGTCGTTGGGGATGGCGT
TTCTCTCCGGGCTCTGTGCGGATCCCGGAGCCCGATACTTGATGGCGGGA
GAAACCGTCGATTTTTGTGACGTTCCAGCAACGTCAACACAGACACCAGT
AGCAACAGGAGTTCTCAGCGGTTCCGCTGGCGTGCCTGCTCCACAGGAAC
GGGATCCCGAAGATGGTGCGGAAGAAGCCAGCACAGCGGCAGTCACCGCG
GCGATTGAAGCCATTGGTATTCGGGACGACGGGGACGCGGTGGGAGGTGT
CGATGTCGTTGTAGTTGGCAAAGACTCTGCGAGTGGAGGGGGTGATGGAC
GCCGCGTCCGTTTCGTTGATGAACGGGGTGTGGATTTGGACAGCGTTGAG
GGCCGGGGAGGTGGCGATGATCAAAACAACAGCGACGCCGTGTACATGCA
GGAGGAGGAGGAGGAGGATGAGGAAGAGGGGCAGGAAGAAGAAGAGGAGG
CGGTAGGGGGAGGGGGGCGCGAGCAGATTGCGCGAATTTTGTCGGAGAGA
TTTTTGGCTGGATTGGAGAAAGGCGTGGACTACAGGAGCGTGGACGAAGA
CGAGCGACTTGATGACCTGGAACAGCTTTCAAGGGATGAGCAAGATCGCT
GGTTCCGCGGCGAAGATGACAGCTCCATGGACTTGATTATTTAG
back to top