mRNA_P-littoralis_Contig1369.6.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1369.6.1
Unique NamemRNA_P-littoralis_Contig1369.6.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 3.920e-194
Identity = 293/433 (67.67%), Postives = 341/433 (78.75%), Query Frame = 2
Query: 1175 CPSVEAPQKVIDFATELPRAVMNHDTLELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVKKLQEVCRRMQTAASNMDLSVLQQILSRGLGDVDQVSTDRSGDALLHLMPVPGTGFEEFSVNFASEYAHDLTTGELPKKEFAALAGFVRAAFTNDELGAKVVAERAAGFEIIAHKTIVGADEQQLFDMRILSSANSSTESELEGDSVRFNFLKEESFEGNSFPETLVTGTYYRPGSKTFPAIDSFGVSSGSETLWFFQMKSAGLPPKTGDKAVKW 2473
            C  V  P+ + DF   L +AV+  +TLEL  GTFFLG+    SKLFIRPCY++LSEL+L G +  TM  IVVTGTPGIGKS FGFYL+YLLR QG TVV + K  W+RFSDEGV  G    F++  YL  +   W LSDPE RP E     TVVL+SP+  RV+EFMKQ GS R +MP W LDELF C++AVFPHVP+TDVR+RF KVGGVARAVF+ +KL++VC +MQ AASNMDL++LQQILSR   DVDQVSTDRSGDALLHL+P+P TGFEEFSV+FASE+AH +T GELPKKEFA LA FV AAF +DELG KV AERAAGFE IAHKTI GA EQQ FDMRILS A+SST+S LEG+ +R +F+KE+SFEGNSFP+ LV GTYYRPGS  F A DSFGV SGS+TLWFFQ+KSAGLPPK G+KAVKW
Sbjct:   31 CLLVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNS-TWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAERAAGFETIAHKTIGGASEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFPDALVAGTYYRPGSPNFAAADSFGVDSGSKTLWFFQVKSAGLPPKEGEKAVKW 462          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA)

HSP 1 Score: 172 bits (435), Expect = 5.500e-42
Identity = 138/421 (32.78%), Postives = 197/421 (46.79%), Query Frame = 2
Query: 1202 VIDFATELPRAVMNHDTLELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGE-LSDFKKKRYLDNDEDNWCLSDP--ESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVK-------KLQEVCRRMQTAASNMDLSVLQQILSRGLGDVDQVSTDRSGDALLHLMPVPGTGFEEFSVNFASEYAHDLTTGELPKKEFAALAGFVRAAFTNDELGAKVVAERAAGFEIIAHKTIVGADEQQLFDMRILSSANSSTESELEGDSVRFNFLKEESFEGNSFPETLVTGTYYRPGSKTFPAIDSFGVSSGSETLWFFQMKSA 2434
            V+ F   L RA  + D L L  GT+F+GD   G++++IR CYREL + +    +S T R +V+TGTPGIGKS +  Y L+ LRR G TVVY    D+YRFS E V   + +  FK    L +  D W L DP  +  PY G  G T+V VSP   R   F+K+  +   +MPVWS +E+  C++ +F HVP++ V+    + GGV R V           KLQ+  R+  TA           IL+ G    D  ST    D +LH+       F    + +AS+YA D     L + +  A  G +RA   +      +   R   FE   H+ +        F+ R+L  A     +        F F +  +F        +  G YY P +    A DSF +  G   L+ FQ+  A
Sbjct:   83 VVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIKAMVTSGT-RRVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHP-DVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQSRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLRAT------ILNAG---EDAGSTAALSDKVLHMCTAD---FVHVRLMWASQYAFDA----LCEAQGEASKGELRAFIASSARLPSLATLRGLVFEPYVHRLLGNGS---CFEYRVLEPAQHGVTT------FNFAFRRSVTFARLRDIWRIEEGVYYAPRASNLSAGDSFAIIDG--VLFIFQITVA 474          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 6.790e-37
Identity = 71/119 (59.66%), Postives = 85/119 (71.43%), Query Frame = 2
Query: 1175 CPSVEAPQKVIDFATELPRAVMNHDTLELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGEL 1531
            C  V  P+ + DF   L +AV+  +TLEL  GTFFLG+    SKLFIRPCY++LSEL+L G +  TM  IVVTGTPGIGKS FGFYL+YLLR QG TVV + KG W+RFSD GV  G+ 
Sbjct:   12 CLPVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDF 130          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A836CEN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.470e-30
Identity = 74/196 (37.76%), Postives = 108/196 (55.10%), Query Frame = 2
Query: 1253 LELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFP------HVPKTDVRKRFGKVGGVARAVF 1822
            L+L +GT+F+G+  +GS ++IR CY  L E +    ++  ++ +V+TGTPGIGK+ + FY L+ LR+ G+TVVY     WYRF      +G    F    YLD+       +         F G T+V V+P+ VR HEF+K   + + FMPVWS +EL  C   +F        VP+  VR+ F + GGV R V 
Sbjct:   16 LKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARRVQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDP-----AAXXXXXXXXXFGGITLVFVTPRWVRYHEFLKAPAATKRFMPVWSEEELLRCAELLFSGQDLERDVPQARVRELFRRWGGVPRYVL 206          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A372Q6T8_9GLOM (Crinkler domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372Q6T8_9GLOM)

HSP 1 Score: 137 bits (345), Expect = 7.930e-30
Identity = 120/411 (29.20%), Postives = 188/411 (45.74%), Query Frame = 2
Query: 1241 NHDTLELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSK--GDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVKKLQEVCRRMQTAASNMDLSVLQQILSRGLGDV--------------------DQVSTD-RSGDALLHLMPVPGTGFEEFSVNFASEYAHDLTT--------GELPKKEFAALAGFVRAAFTNDELGAKVVAERAAGFEIIAHKTIVGADEQQLFDMRILSSANSSTESELEGDSVRFNFLKEESFEGNSFPETLVTGTYYRPGSKTFPAIDS 2380
            N D LEL  G  FLG+ +  S LFIR CYR L +++L   SS  +RN+++TG PGIGK+ FG+YLLY L ++ +TV+YDS   G    F  E     E+ +  + R   ++ +NW + D   +  +  T  T+++ SPK     EF K + S   +MPVWS  E+ +C+  ++ H+    V+  F K GG+ R V           ++Q A    D  +L  + +    D                     +Q  TD   G+ + ++   P   + +  + FASEY  +           G+L +  F++L+       +N  LG          FE IAH+ + G      FD+R L S    T ++         F K++     S    +  G YYRP +  +P+IDS
Sbjct:  165 NQDFLELPKGVHFLGEINEPSTLFIRSCYRHLLDIVLDNNSS--VRNLIITGNPGIGKTYFGYYLLYNLIQRNQTVMYDSHSTGHVIVFDQEAFYLYEVLNADQIRAFLSNANNWYIVD--GKEPQKATAKTILVCSPKKAIFKEFEKFQLSSTRYMPVWSYAEISKCKDKLYNHLQNNLVKTLFDKWGGIPRFVLEKATDYSHQCKLQEAIDACDFDILDYVGATEAKDTSHKLIHIVTNPLVVDVNIVNEQEQTDVDGGNDVEYIEEDPP--YSQKIIKFASEYVAERVIMRLELRNRGKLRRDLFSSLSEGT----SNSVLGRY--------FEEIAHQLLRGGGT---FDIRSLESGGRPTTTKP--------FTKQDKIYTFSDVNGITDGCYYRPDNPNYPSIDS 546          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A397JR08_9GLOM (Crinkler domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397JR08_9GLOM)

HSP 1 Score: 131 bits (330), Expect = 2.830e-28
Identity = 123/434 (28.34%), Postives = 204/434 (47.00%), Query Frame = 2
Query: 1118 DIFLINVTRHLFFCLSPMTCPSVEAPQKVIDFATELPRAVMNH--DTLELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVKKLQEVCRRM---QTAASNMDLSVLQQILSRGLGDVDQVSTDRSGDALLHLMP-VPG------TGFEEFSVNFASEYAHDLTTGELPKKEFAALAGFVRAAFTNDELGAKVVAERAAGFEIIAHKTIVGADEQQLFDMRILSSANSSTESEL-EGDSVRFNFLKEESFEGNSFPETLVTGTYYRPGSKTFPAIDS 2380
            ++F  NVT      +  +  PS    + +++    L    +N   + L L  GT FLGD +    L+IR CYREL E++      + ++ + +TG PGIGKS+F +Y+LY L ++ KT+VY+  G  +   ++   K    D    R   ++ D W + D  + P E     T+++ SP+      F K  G+   +MP+WS +E+  C+  +F H+    V   F K GG+ R  F ++K Q+ C++    +    N D  +      + +G+ D  S+D     LLH+   +P       T + E  + FASEY        L +     L  FV ++ + +E GA     R   FE IAH+ +        F++R+L S ++S+  E  + D + FN + E           +  G Y +P SK F +ID+
Sbjct:   91 EVFTENVTDDFIKII--IERPSEFINENLVNLWNALKNTKLNKQDEFLHLSGGTSFLGDLNI---LYIRKCYRELLEIVF----DENIKRLRITGNPGIGKSIFTYYILYKLAQRNKTIVYNHLGHTFIIFEK--EKAIYVDKSVIRTYIHNPDVWYIIDA-TEP-EKVEAKTILVCSPRKDHYRNFDKYVGAKIRYMPIWSREEIETCREKIFNHLKPEKVYDLFSKWGGIPR--FVLEKAQDPCQQRLLEEAIVKNSDKRIF-----KFVGETD--SSDDMSHMLLHIHTNIPDKVNDIRTSYIEKFLLFASEYVSKRVIDALIENHRKDLERFVISSSSINEFGAL----RGYVFEDIAHRILQKGGR---FNIRLLDSDSTSSTIEFPKRDKLVFNKINE-----------IKEGMYCQPKSKNFGSIDA 484          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A397UD55_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM)

HSP 1 Score: 129 bits (325), Expect = 4.990e-28
Identity = 97/346 (28.03%), Postives = 163/346 (47.11%), Query Frame = 2
Query: 1175 CPSVEAPQKVID-FATELPRAVMNHDTLELVSGTFFLGDSSYGSKLFIRPCYRELSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVKKLQEVCRRMQTAASNMDLSVLQQILSRGLGDVDQVSTDRSGDALLHLMP-VPG---------TGFEEFSVNFASEYAHDLTTGELPKKEFAALAGFVRAAFTNDELGAKVVAERAAGFEIIAHKTI 2179
            C  ++  +K +  F   L  A ++++ L+L  GT+FLGD   G+ L+IR CY  L++++     ++ +    +TG PGIGK+ FG+YLLYLL++Q KT+VY     +    ++       + F    YLDN  D W + D   +P       T++  SP+     EF K  G+   FMP WS +E+ EC+  +F H+    V   + + GG+ R VF           ++ A +  +  +L  +     G++D    D     ++H+   +PG         T +    + FASE+  +    +  K     L  FV A+ +++E        R   FE IAH+ +
Sbjct:   26 CKKIDETEKDLGKFWCFLENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIF----NEKINRCRITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFDFNEYLDNT-DVWYIVD--GQPPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLEIAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFV-----GEIDHA--DDISHRIVHIHTNLPGEEEEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYSTL----RGVIFEQIAHRIL 353          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: D0NWG9_PHYIT (Crinkler (CRN) family protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWG9_PHYIT)

HSP 1 Score: 129 bits (324), Expect = 5.350e-28
Identity = 99/296 (33.45%), Postives = 151/296 (51.01%), Query Frame = 2
Query: 1253 LELVSGTFFLGDSSYGSKLFIRPCYRELSELLL--LGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKG--DWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCR-CFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVKKLQEVCRRMQTAASNMDLSVLQQILSRGLGDVDQVSTDRSGDALLHLMPVPGTGFEEFSVNFASEYAHDLTTGELPKKEFAALAGFVRAAFTNDELGA 2125
            +EL   T+ LGDS+ GS+++IR CY  L EL L  +        ++V+ GTPGIGK+ FGF ++ +L R G TVVY+S G    + F+   VA+G   DF   R LD     + + D     Y  +   T++L SP+    +EF K   +C+ C+MPVWSL E+ +C++ ++   P   V+  F + GG+AR V    ++ +    ++ A   +DL  L +  S+   +  QVS       LLH         E F+  FAS+Y        L KK+   L  F+ A   +D +GA
Sbjct:  168 VELPRDTYLLGDSTLGSRIYIRHCYPALWELCLERIRDEKTNTPHLVILGTPGIGKTFFGFVIVLILARAGATVVYESGGLKKRFLFAHNVVAQGSQEDF--VRILDQPT-TYYIVDAVKPAY--YPAKTILLTSPRRSIWYEFNKT--NCQSCYMPVWSLKEILQCRKLMYSDTPMAVVQDCFRRWGGIARYVLRFSQVGDQQVLLEKATDTVDLDWLVKACSQLDANDAQVS-----HRLLHYRVSKAFDSEYFA--FASQYVQQAVYNRLYKKDKRKLLEFIAA---SDGVGA 446          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: D0NWH9_PHYIT (Crinkler (CRN) family protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWH9_PHYIT)

HSP 1 Score: 126 bits (317), Expect = 1.840e-26
Identity = 98/299 (32.78%), Postives = 148/299 (49.50%), Query Frame = 2
Query: 1253 LELVSGTFFLGDSSYGSKLFIRPCYRELSELLL--LGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKG--DWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQEGSCR-CFMPVWSLDELFECQRAVFPHVPKTDVRKRFGKVGGVARAVFNVKKLQEVCRRMQTAASNMDLSVLQQILSRGLGDVDQVSTDRSGDALLHLMPVPGTGFEEFSVNFASEYAHDLTTGELPKKEFAALAGFVRAAFTNDELGAKVV 2134
            +EL   T+ LGDS+ GS+++IR CY  L EL L  +        ++V+ GTPGIGK+ FGF ++ +L R G TVVY+S G    + F+   VA+G   DF   R LD     + +   +   Y      T++L SP+    +EF K   +CR C+MPVWSL E+ +C+  ++   P   V+  F + GG+AR V    ++ +    ++ A   +DL  L     +  G +D      S   LLH        F+   + FAS+Y        L KK+   L  F+ A   +D +GA  V
Sbjct:  167 VELPRDTYLLGDSTLGSRIYIRHCYPTLWELCLERIHDEKTNTPHLVILGTPGIGKTFFGFVIVLILARAGATVVYESGGLNKRFLFAHNVVAQGSQEDF--VRILDQPTTYYIVDGVKPAYYPA---KTILLTSPRRSIWYEFNKT--NCRSCYMPVWSLKEILQCRELMYSDTPMAVVQDCFRRWGGIARYVLRFSQVGDQQVLLEKAMDIVDLDWL----VKACGQLDANDAQVS-HRLLHYRV--SKAFDSEYIVFASQYVQQEMDDRLYKKDKRKLLEFIAA---SDGVGALAV 448          
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Match: A0A836CIP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP4_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.330e-26
Identity = 75/189 (39.68%), Postives = 105/189 (55.56%), Query Frame = 2
Query: 1175 CPSVEAPQK----VIDFATELPRAVMNHDTLELVSGTFFLGDSSYGSKLFIRPCYRELSE----LLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSKGDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTVVLVSPKAVRVHEFMKQ-EGSCRCFMPVW 1714
            C ++  P      +++F   L  A      L LV GTFF+GD + G+ +++R CYR+L+E    LL +G      R +VVTGTPGIGKSV+ FY L+ L + GKTVVY S  D+YRF  + V +G  S+F +  YL  D +   L DP+   Y  F G T+  +S    R  +F+     + RC MPVW
Sbjct:  137 CVTIPGPSPATAGIVEFWHALSEATEEDGWLILVDGTFFMGDPTRGTCIYVRSCYRDLTEHIEQLLAIGT-----RRVVVTGTPGIGKSVYAFYWLWRLCQAGKTVVYQSDNDFYRFCGQDVRQGNRSEFFRAGYL-QDANAGFLCDPDMELYSCFQGVTIAFMSSCKKRYSKFLNTPRATARC-MPVW 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1369.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFB9_9PHAE3.920e-19467.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z6Q5_9STRA5.500e-4232.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KCR9_9PHAE6.790e-3759.66Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CEN6_9STRA1.470e-3037.76Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A372Q6T8_9GLOM7.930e-3029.20Crinkler domain-containing protein n=1 Tax=Rhizoph... [more]
A0A397JR08_9GLOM2.830e-2828.34Crinkler domain-containing protein n=1 Tax=Diversi... [more]
A0A397UD55_9GLOM4.990e-2828.03Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
D0NWG9_PHYIT5.350e-2833.45Crinkler (CRN) family protein, putative n=1 Tax=Ph... [more]
D0NWH9_PHYIT1.840e-2632.78Crinkler (CRN) family protein, putative n=1 Tax=Ph... [more]
A0A836CIP4_9STRA3.330e-2639.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1369contigP-littoralis_Contig1369:12098..14570 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog109871.XP_006682787.1
Model size2475
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.06e-31
EggNOG OGs2CQRH@1|root,2R5I5@2759|Eukaryota,3A50G@33154|Opisthokonta,3P4XS@4751|Fungi
Descriptionto CRN-like CRN16
Cds size1590
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789631.7785444-CDS-P-littoralis_Contig1369:12097..136871680789631.7785444-CDS-P-littoralis_Contig1369:12097..13687Pylaiella littoralis U1_48CDSP-littoralis_Contig1369 12098..13687 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789631.789821-UTR-P-littoralis_Contig1369:13687..145701680789631.789821-UTR-P-littoralis_Contig1369:13687..14570Pylaiella littoralis U1_48UTRP-littoralis_Contig1369 13688..14570 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1369.6.1prot_P-littoralis_Contig1369.6.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1369 12098..13687 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1369.6.1

>prot_P-littoralis_Contig1369.6.1 ID=prot_P-littoralis_Contig1369.6.1|Name=mRNA_P-littoralis_Contig1369.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=530bp
MFLDTQFLVSLVTCKINGKVYAENVMVYPHPLWATSPVRNQLLCFGLSAV
SNGSFRCRGQSCTDFICSAQPWRFSLCADIFLINVTRHLFFCLSPMTCPS
VEAPQKVIDFATELPRAVMNHDTLELVSGTFFLGDSSYGSKLFIRPCYRE
LSELLLLGASSDTMRNIVVTGTPGIGKSVFGFYLLYLLRRQGKTVVYDSK
GDWYRFSDEGVAKGELSDFKKKRYLDNDEDNWCLSDPESRPYEGFTGTTV
VLVSPKAVRVHEFMKQEGSCRCFMPVWSLDELFECQRAVFPHVPKTDVRK
RFGKVGGVARAVFNVKKLQEVCRRMQTAASNMDLSVLQQILSRGLGDVDQ
VSTDRSGDALLHLMPVPGTGFEEFSVNFASEYAHDLTTGELPKKEFAALA
GFVRAAFTNDELGAKVVAERAAGFEIIAHKTIVGADEQQLFDMRILSSAN
SSTESELEGDSVRFNFLKEESFEGNSFPETLVTGTYYRPGSKTFPAIDSF
GVSSGSETLWFFQMKSAGLPPKTGDKAVKW
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mRNA from alignment at P-littoralis_Contig1369:12098..14570-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1369.6.1 ID=mRNA_P-littoralis_Contig1369.6.1|Name=mRNA_P-littoralis_Contig1369.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2473bp|location=Sequence derived from alignment at P-littoralis_Contig1369:12098..14570- (Pylaiella littoralis U1_48)
GGGTATTTTCCTAGAAAAATAATGGGTGAATGGATTTGCATACACGTCAC CCCCAAACGTACAAGTGGCCCACCAGCGCCTTATCCTCCATGACAAGCGT AGTGGATTGAAATGAATAGGTTAGGTCTCCTGAGAACTTCCTTTGGCTGC GAAGCACGTTTGATTAGGATCCCTAAACGGCTTGCTAGAACAATTCCTAG ATGTCGCCTTGTGTGTGTTTCGTAGATTTGGCCACAAACCACGAGCGGTC GGTTGTTTGGTCTTGCAGCCTCTCCCTCGGAACCAACCAATACTCCCTGA GCGCAATTTATCCACGACAATCTAACACGGCTGACACAGCAAGGTGCAGT TGACGAGATCTATACTCGGGTCCAGCTTTTGATTTGGATCCTGAACCTCT GTCACCCAAGTAAGATGCCAAGGAGACGCGGCGCGTCTCACAAGAACGGG TGACCGATCTTCGCTGTACCTCATGCCATACACTCAAGAGTAGGGTATGA GCAACTGCGTGTCCTACGGATTGCAACTCGCGAAAGTGATGGGGTGCACG TTGACCGTGCGAGGCCAAAAAGCGGTTTTAGGTGAAAATCGAGAATCGGA GGGGTGAGAAGCTTTTCACTAGACTGAAAACAAGTGCGACAGACTCTCGC GTGACACAAAACAGAAGCCACTCCGTACCCGGAAGGAGAACGACTAATTC ATGATGTGGGACCGATTGGAAAAGCCCCCCGTCTGCGTGACTCTGGCTGT GATTCTGCACTGCTGTTTTTTTTCTTCTTTCCTCTGGTTAGGATGCTTAC CTTGCTCGACTTATTCCGTCGATTTTGAACCTACCGTCACCAATGCCTAA TAATGCACCCTGATTTGAGTCGTTTTCGGTCGGATGTTCTTGGACACGCA GTTCCTCGTGAGTCTCGTTACGTGTAAAATAAATGGGAAGGTTTACGCTG AGAATGTCATGGTTTACCCTCATCCTCTATGGGCCACGTCACCTGTCCGC AATCAGCTGCTTTGTTTCGGTTTGAGCGCCGTGTCAAATGGGAGTTTCAG GTGCCGTGGCCAGTCGTGTACTGATTTCATATGCAGCGCCCAACCATGGC GCTTTTCCCTTTGCGCCGATATCTTTCTCATCAATGTGACCCGACACTTG TTTTTTTGCCTCTCCCCTATGACTTGTCCGTCTGTTGAAGCCCCCCAAAA GGTGATAGATTTCGCGACCGAACTCCCCCGAGCAGTAATGAACCACGACA CGCTGGAACTAGTAAGCGGCACGTTCTTTCTCGGCGATTCTTCGTATGGA TCCAAGCTCTTTATCCGTCCTTGCTACAGGGAATTGTCAGAGCTTCTCTT GCTCGGTGCTAGCAGTGATACTATGCGGAATATTGTTGTAACAGGGACTC CCGGTATTGGCAAATCAGTGTTTGGTTTCTATCTGCTGTACCTGCTAAGG CGTCAAGGAAAAACTGTTGTTTACGATTCGAAGGGCGACTGGTACCGGTT TAGTGATGAAGGGGTGGCCAAGGGAGAGTTATCAGATTTCAAGAAGAAAA GGTATCTGGACAATGACGAAGACAATTGGTGTTTGAGTGATCCGGAGAGC CGGCCTTACGAGGGGTTCACTGGTACAACTGTTGTGCTTGTGTCACCCAA GGCGGTCAGAGTTCACGAGTTCATGAAACAAGAGGGTTCCTGTCGGTGTT TTATGCCAGTGTGGAGCCTGGATGAGCTGTTCGAATGTCAACGAGCTGTT TTCCCTCATGTGCCAAAAACCGACGTGCGGAAACGCTTTGGTAAGGTTGG AGGTGTGGCTAGAGCAGTCTTCAATGTGAAAAAGCTCCAGGAGGTTTGCC GTAGAATGCAAACAGCGGCTTCAAATATGGATCTAAGTGTGCTGCAACAG ATTCTGTCGCGTGGGCTTGGTGACGTTGACCAGGTTTCGACCGATAGGAG TGGTGACGCACTCTTGCATTTGATGCCTGTACCTGGAACAGGTTTCGAGG AGTTCAGTGTCAATTTTGCGAGTGAGTACGCCCATGATTTGACTACAGGA GAGCTTCCAAAAAAGGAATTTGCTGCACTTGCAGGCTTTGTCCGGGCTGC TTTCACAAACGACGAATTGGGCGCCAAGGTTGTGGCTGAGCGTGCGGCCG GGTTTGAAATTATTGCACACAAAACAATCGTAGGCGCTGACGAGCAGCAA CTGTTTGACATGAGAATCCTGAGCAGTGCTAATAGCAGTACAGAGTCTGA ACTCGAGGGGGATTCTGTGAGGTTCAATTTTCTGAAGGAGGAGTCATTCG AAGGCAATAGTTTTCCCGAAACGCTTGTCACTGGGACGTACTATAGGCCC GGAAGCAAGACTTTTCCAGCGATTGATTCGTTCGGTGTGAGCAGCGGCAG CGAAACCTTGTGGTTTTTTCAGATGAAATCTGCAGGCTTGCCGCCTAAAA CGGGGGACAAGGCTGTCAAGTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1369:12098..14570-

>mRNA_P-littoralis_Contig1369.6.1 ID=mRNA_P-littoralis_Contig1369.6.1|Name=mRNA_P-littoralis_Contig1369.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1590bp|location=Sequence derived from alignment at P-littoralis_Contig1369:12098..14570- (Pylaiella littoralis U1_48)
ATGTTCTTGGACACGCAGTTCCTCGTGAGTCTCGTTACGTGTAAAATAAA
TGGGAAGGTTTACGCTGAGAATGTCATGGTTTACCCTCATCCTCTATGGG
CCACGTCACCTGTCCGCAATCAGCTGCTTTGTTTCGGTTTGAGCGCCGTG
TCAAATGGGAGTTTCAGGTGCCGTGGCCAGTCGTGTACTGATTTCATATG
CAGCGCCCAACCATGGCGCTTTTCCCTTTGCGCCGATATCTTTCTCATCA
ATGTGACCCGACACTTGTTTTTTTGCCTCTCCCCTATGACTTGTCCGTCT
GTTGAAGCCCCCCAAAAGGTGATAGATTTCGCGACCGAACTCCCCCGAGC
AGTAATGAACCACGACACGCTGGAACTAGTAAGCGGCACGTTCTTTCTCG
GCGATTCTTCGTATGGATCCAAGCTCTTTATCCGTCCTTGCTACAGGGAA
TTGTCAGAGCTTCTCTTGCTCGGTGCTAGCAGTGATACTATGCGGAATAT
TGTTGTAACAGGGACTCCCGGTATTGGCAAATCAGTGTTTGGTTTCTATC
TGCTGTACCTGCTAAGGCGTCAAGGAAAAACTGTTGTTTACGATTCGAAG
GGCGACTGGTACCGGTTTAGTGATGAAGGGGTGGCCAAGGGAGAGTTATC
AGATTTCAAGAAGAAAAGGTATCTGGACAATGACGAAGACAATTGGTGTT
TGAGTGATCCGGAGAGCCGGCCTTACGAGGGGTTCACTGGTACAACTGTT
GTGCTTGTGTCACCCAAGGCGGTCAGAGTTCACGAGTTCATGAAACAAGA
GGGTTCCTGTCGGTGTTTTATGCCAGTGTGGAGCCTGGATGAGCTGTTCG
AATGTCAACGAGCTGTTTTCCCTCATGTGCCAAAAACCGACGTGCGGAAA
CGCTTTGGTAAGGTTGGAGGTGTGGCTAGAGCAGTCTTCAATGTGAAAAA
GCTCCAGGAGGTTTGCCGTAGAATGCAAACAGCGGCTTCAAATATGGATC
TAAGTGTGCTGCAACAGATTCTGTCGCGTGGGCTTGGTGACGTTGACCAG
GTTTCGACCGATAGGAGTGGTGACGCACTCTTGCATTTGATGCCTGTACC
TGGAACAGGTTTCGAGGAGTTCAGTGTCAATTTTGCGAGTGAGTACGCCC
ATGATTTGACTACAGGAGAGCTTCCAAAAAAGGAATTTGCTGCACTTGCA
GGCTTTGTCCGGGCTGCTTTCACAAACGACGAATTGGGCGCCAAGGTTGT
GGCTGAGCGTGCGGCCGGGTTTGAAATTATTGCACACAAAACAATCGTAG
GCGCTGACGAGCAGCAACTGTTTGACATGAGAATCCTGAGCAGTGCTAAT
AGCAGTACAGAGTCTGAACTCGAGGGGGATTCTGTGAGGTTCAATTTTCT
GAAGGAGGAGTCATTCGAAGGCAATAGTTTTCCCGAAACGCTTGTCACTG
GGACGTACTATAGGCCCGGAAGCAAGACTTTTCCAGCGATTGATTCGTTC
GGTGTGAGCAGCGGCAGCGAAACCTTGTGGTTTTTTCAGATGAAATCTGC
AGGCTTGCCGCCTAAAACGGGGGACAAGGCTGTCAAGTGG
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