mRNA_P-littoralis_Contig1368.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5KM72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM72_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 6.250e-11 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 139 GEEVTVNNSVAVGEEKELLTNPVGRIFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
G EV N V + ++ +LT P +++YKLRVRQ SCYCSKC VGAY+DC+PAKKY
Sbjct: 348 GVEVQKENGVLLADKSTVLTLPA---------VTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 403
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5JJU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU0_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 6.790e-11 Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 139 GEEVTVNNSVAV-GEEKELLTNP----VGRIFAPRLRA-SRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
G EV N V + G EKE++ NP L A +++YKLRVRQ SCYCSKC VGAY+DC+PAKKY
Sbjct: 140 GVEVQTENGVPLEGGEKEVVANPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 210
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 3.250e-10 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 172 VGEEKELLTNPVG-----RIFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
VG E E++ NP+ I +++YKLRVRQ SCYCSKC VGAY+DC+PAKKY
Sbjct: 823 VGGENEVVVNPLRWQADESIVLTVPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 881
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 3.340e-10 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 172 VGEEKELLTNPVG-----RIFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
VG E E++ NP+ I +++YKLRVRQ SCYCSKC VGAY+DC+PAKKY
Sbjct: 1447 VGGENEVVVNPLRWQADESIVLTVPAVTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 1505
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5JIX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX4_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 3.730e-10 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 172 VGEEKELLTNPVGRIFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
+ +E +LT P +++YKLRVRQ SCYCSKC VGAY+DC+PAKKY
Sbjct: 107 MADESTVLTLPA---------VTKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 151
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5KXG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXG9_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 2.780e-9 Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 238 SRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
+++YKLRVRQ SCYCSKC VGAY+DC+PAKKY
Sbjct: 582 TKRYKLRVRQASCYCSKCSVGAYDDCVPAKKY 613
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5J993_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J993_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 2.910e-9 Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 139 GEEVTVNNSVA-VGEEKELLTNPVG-----RIFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
G EV + N V VG EKE++ NP L +++YKLRVRQ SC+ SKC VGAY DC+PAKKY
Sbjct: 218 GVEVQLENDVPLVGGEKEVVANPQRWQADESTVLTLLAVTKRYKLRVRQASCHRSKCSVGAYNDCVPAKKY 288
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5KXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK6_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 4.560e-9 Identity = 33/59 (55.93%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 172 VGEEKELLTNP----VGRIFAPRLRA-SRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
VG EKE++ NP L A +++YKLRVRQ SCYCSKC VGAY+DC+ AKKY
Sbjct: 275 VGGEKEVVANPQRWQADESTVLTLPAVTKRYKLRVRQASCYCSKCSVGAYDDCVSAKKY 333
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 1.580e-7 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 139 GEEVTVNNSVA-VGEEKELLTNPVGR-------IFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKK 330
G EV N V VG EKE++ NP + P + +++YKLRVRQ SCYCS C VGAY+DC+PAKK
Sbjct: 544 GVEVQTENGVPLVGGEKEVVANPQRWQADESTVLTLPTV--TKRYKLRVRQASCYCS-CSVGAYDDCVPAKK 612
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Match: A0A6H5KR28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR28_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 3.720e-7 Identity = 32/68 (47.06%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 139 GEEVTVNNSVAVGEEKE---LLTNPVGRIFAPRLRASRKYKLRVRQTSCYCSKCRVGAYEDCIPAKKY 333
G EV S VG E + +LT P +++Y+LRVRQ SC CSKC VGAY+DC PA+KY
Sbjct: 195 GAEVQQEESSGVGVEADESIVLTLPA---------VTKRYELRVRQASCCCSKCSVGAYDDCFPARKY 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1368.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1368.7.1 >prot_P-littoralis_Contig1368.7.1 ID=prot_P-littoralis_Contig1368.7.1|Name=mRNA_P-littoralis_Contig1368.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp SPGCRVDWRIWQFQVVPVHGGSGGRAGESRCLRRRTDSSQHSRVVNGEEVback to top mRNA from alignment at P-littoralis_Contig1368:26073..26408- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1368.7.1 ID=mRNA_P-littoralis_Contig1368.7.1|Name=mRNA_P-littoralis_Contig1368.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig1368:26073..26408- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1368:26073..26408- >mRNA_P-littoralis_Contig1368.7.1 ID=mRNA_P-littoralis_Contig1368.7.1|Name=mRNA_P-littoralis_Contig1368.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig1368:26073..26408- (Pylaiella littoralis U1_48)back to top |