mRNA_P-littoralis_Contig1363.6.8 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 445 bits (1145), Expect = 3.180e-143 Identity = 254/636 (39.94%), Postives = 351/636 (55.19%), Query Frame = 1
Query: 589 HSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDTIGFKNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAGGGEPHGYKEWCSSLGFSSDGVPPDKLTWQQRVSLTLPSSSDLNQRYGSLLGCGRPPASNPCTSPTCSLCWRNRHMGLSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMPSDWMLSRASRGNDIELFVSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGEDGHIEEGVV-TVWVAVLEYVTAGRGNLRKEDTVTGFDVLMLRSKLSFFPVAAIRRVVHIVHDCPATGASACGLVSDGNNRSVWQCKLDKRSRYLLN 2493
HS W+N K N+KT++ C C V + +L + +Y+I D+ + SR GVVVP NPL ++ FDRV G G+DILHQ + N K+++ F+++AL+ GS +V D+T+ GG SALTG Q+W++SSI+P L PIF++ ++ YV+ + VA R + G+ AG VC AF DL+ ACS S F+VR+ SFT L +L + +++QV+QA V+G ALGT HKG+HI N+ G V+N N E+K+K+ K + S+SGRDN +HIWR ND +A+KAL +G+ W A +G +CR LR++ VLPL A S+ AG + W D+ WQ V TLP++ L Y LGCGR + C C+ CWR + GL + +V CFNHWG APE AS G G LRGG V+DA + WM+ SR ND+EL+V +A R G TT+G+ FFEH GND R DG ++EG T+WVAV EYVT G G RK + TG DV LR + FF + IR +VH++H C TGAS+C L+ + W+C + + YLLN
Sbjct: 2 HSLWANQKHHNAKTERACQACVVPRRDLGNPKYDI-----------------------KDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSAL---NSGKKIMGFVMDALDPAGSEIVP-----------------DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEP-GTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADGIEWTA---------------SGDLCRQTLREVFSVLPLAPALSDTPSAG-------RPW-------------DRADWQSVVRGTLPTALQLEALYKVKLGCGREESGPLCNDDVCAFCWRG-NSGLHNGSVTCFNHWGNAPEEASAGTGTLRGGPVKDAAEFGNKWMIQETSRANDVELYVDTSARRSGERRQAATTLGRIACFFEHQGNDSRHLVDGKVQEGGEWTIWVAVKEYVTVGMGQGRKVNYPTGCDVFYLRRSVQFFHASGIRSMVHMMHACATTGASSCCLLRGEGKKDEWRCTPTQSAHYLLN 557
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 371 bits (952), Expect = 9.940e-115 Identity = 203/486 (41.77%), Postives = 285/486 (58.64%), Query Frame = 1
Query: 469 METIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDTIGFKNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAGGGEPHGYKEWCSSL-GFSSDGVPPDKLTWQQRVSLTLPSSSDLNQRYGSLLGCGRPPASNPCTSPTCSLCWRN 1923
M+ I+ L+ GC+A D +VT VR+GLLTA LD+P HS W+N K N+KT++ C C V + +L + +Y+I N RT DG+ + L V A + D+ + SR GVVVP NP ++ FDRV G G+DILHQ + N K+++ F+++AL+ GS +V R ++PPN P+ D+T+ GG+SALTG Q+W++SS P L PIF++ ++ YV+ + VA R + G+ AG VC AF DL+ ACS S F+VR+ SFT L L + + +QV+QA VMG ALGT HKG+HI N+ G V+N N E+K+K+ K + S+SGRDN +HIWR ND +A+KAL + + W A + KW + TAG +CR L+DL VL L A S+ AG P GY EW L G + D WQ V TLP++ +Y LGCGR + C C+ C R+
Sbjct: 1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSAL---NSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDP-GTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKALADAIEWTASGWTGSKW-ERRTVTAGDLCRQTLQDLFSVLLLAPALSDTLSAG--RPWGYVEWDEDLVGTEAPLTGVDGADWQSVVRETLPTAVQHEAQYKDKLGCGREESGPLCNDDVCAFCCRD 479
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 369 bits (947), Expect = 2.540e-114 Identity = 194/405 (47.90%), Postives = 267/405 (65.93%), Query Frame = 1
Query: 199 PWRKEGVDGLYFDRDADS-YDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVALSCLSPALLRRLRSWSLVCAGSKGR-WEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDTIGFKNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNI 1407
PWR++G G +FDR A + N+ G PVFSTG+A SSD FNY+S GK Y+VNAT+V L CLSPALLRRLRSW L G G WE +V LM+ I+ L+ GC+A + D ++T VRMGLLTA LD+P HS W+N K N+KT++ C C V +++L + +Y+I N R+ DG+ + L V + + +Q + SR GVVVP NPL ++ FDRV G G+D+LHQ + N K+++ F+L+AL++ GS +V GR R ++PPN P+ D+T+ GG++ALTG Q+W++SSI P L PIF++ + YV+ +A VA R + N G+ AG VC AF DLI ACS SSF+VR+ SFT L L + + DQV+Q VMG ALG+ HKG+HI N+
Sbjct: 3 PWRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSAL---NAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNV 403
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: A0A6H5LF20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF20_9PHAE) HSP 1 Score: 342 bits (878), Expect = 1.520e-105 Identity = 191/410 (46.59%), Postives = 247/410 (60.24%), Query Frame = 1
Query: 1330 QVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGR--DNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAG------GGEPHGYKEWCSSLGFSSDGVPPDKLTWQQRVSLTLPSSSDLNQRYGSLLGCGRPPASNPCTSPTCSLCWRNRHM--GLSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMPSDWMLSRASRGNDIELFVSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGEDGHI-EEGVVTVWVAVLEYVTAGRGNLRKEDTVTGFDVLMLRSKLSFFPVAAIRRVVHIVHDCPATGASACGLVSDGNNRSVWQCKLDKRSRYLLNGYFHSIVRDPI 2526
QV+QA V G AL + HKG+HI D+IR+LGAV NTN ES HK KK + R +N HI + +ND ALK+L + V W A + NGK + KE TAGP+CR VL+D+ LP + E G GG PHGY++W + L G+ + TWQ+ V LPS +L+Q Y GCGR PC + TCS CWRNR GL H++V FNHWG AP A+ G G +RG V+DAGR S W S ASRG+D+E++++A R+G G+ TT+GK FFFEH GN R ++ ++ EG T+W+AV EYVTAG GN + TG +R L+F+P AIRRVVH++H CP +G SACGLV + + W+C L S YLLN YFHS RD I
Sbjct: 22 QVKQASRVAGLALNSIHKGLHIADDIRNLGAVGNTNAGESNHKDLKKSRRDACLRAGNNEVHIIKNWNDNQALKSLSDSVTWDACGFENGKEMRKE-VTAGPLCREVLQDVFAFLPAMQLSPASVEDGTTTGRQGGRPHGYQQWTADLKGVDAGI--ELQTWQEEVFKMLPSPQELDQHYADYFGCGRIDGEAPCNTRTCSYCWRNRTYKDGLVHDSVEVFNHWGGAPGEANAGTGTVRGCPVKDAGRH-SGWTRSTASRGSDVEIYLTANDQREGRYGLEQTTLGKVAFFFEHQGNPWRRDDESNVLPEGEYTIWMAVSEYVTAGVGNNLQLHHTTGLAEFKMRHTLTFYPTPAIRRVVHMMHACPTSGESACGLVRESKRQ--WRCNLLGTSTYLLNKYFHSPGRDSI 425
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 287 bits (734), Expect = 1.850e-84 Identity = 161/369 (43.63%), Postives = 224/369 (60.70%), Query Frame = 1
Query: 706 RTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDTIGFKNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAGGGEPHGYKEWCSSL-GFSSDGVPPDKLTWQQRVSL 1809
R DG+ + L V + + + SR GVVVP NPL ++ FDRV G G+D+LHQ + N K+++ F+L+AL++ GS +V GR R ++PPN P+ D+T+ GG++ALTG Q+W++SSI P L PIF++ + YV+ +A VA R + N G+ AG VC AF DLI ACS SSF+VR+ SFT L L + + DQV+Q VMG ALG+ HKG+HI N+ G V+N N E+K+KQ K + S+SGRDN +H+W T ND +A++AL +GV W A + KW T+ TAG +CR L+D+ VLPL A S+ AG P GY EW +L G + WQ VS+
Sbjct: 69 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSAL---NAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQALADGVEWTASGWTGRKWETRT-VTAGDLCRVTLQDVFAVLPLAPAQSDTVSAG--RPWGYVEWEQNLVGTEAPVQGVGGADWQSVVSV 430
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.220e-81 Identity = 178/481 (37.01%), Postives = 245/481 (50.94%), Query Frame = 1
Query: 898 NKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAGGGEPHGYKEWCSSLGFSSDGVPPDKLTWQQRVSLTLPSSSDLNQRYGSLLGCGRPPASNPCTSPTCSLCWRNRHMGLSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMPSDWMLSRASRGNDIELFVSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGEDGHIEEGVV-TVWVAVLEYVTAGRGNLRKEDTVTGFDVLMLRSK 2337
N K+++ F+++AL+ GS +V R GG SALT Q+W++ SI P L PIF++ ++ YV+ VA R + + AG VC AF DL+ ACS S F+VR+ SFT L +L +++QV+QA V+ ALGT HKG+ I N+ G V+N N E+K+K+ K + S+SGR+N +HIWR ND +A+K+L +G+ W A + KW + TAG +CR L+D+ VLPL A S+ AG G EW L + + R GL + +V CFNHWG +PE AS G G LRGG V+DA + WM+ SR ND+ L+V A R G TT+G+ + FEH GND R DG ++EG T+WVAV EY+TAGRG RK + TG DV LRS+
Sbjct: 10 NSGKKIMGFVMDALDPAGSEIVRARA-------------------GGGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGRYVRAMVAMEVADRISVEPV-TPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQNSQQEQVKQATRVIRVALGTIHKGLDIARNLVVNGVVTNCNVGEAKNKELKASAPSASGRNNARHIWRATNDSLAIKSLADGIEWTASGWTGSKW-ERRTVTAGDLCRQTLQDVFSVLPLAPALSDTLSAG--RSWGNVEWDEDLLGTEASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXVDRADCPGLHNGSVTCFNHWGNSPEEASAGTGTLRGGPVKDAAEFGNKWMIQETSRANDVGLYVDTNARRFGEREQAATTLGRIAYCFEHQGNDSRHLVDGKVQEGGEWTIWVAVEEYITAGRGQGRKVNHPTGCDVFYLRSQ 465
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: A0A6H5JYK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK1_9PHAE) HSP 1 Score: 266 bits (679), Expect = 2.790e-78 Identity = 140/272 (51.47%), Postives = 176/272 (64.71%), Query Frame = 1
Query: 1405 IRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLES--AFSENAEAG--GGEPHGYKEWCSSLGFSSDGVPPDKLTWQQRVSLTLPSSSDLNQRYGSLLGCGRPPASNPCTSPTCSLCWRNRHMGLSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMPSDWMLSRASRGNDIELFVSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGE 2208
R GAV N N ESKHK+ KK + S+SGRDN HI+RT+ND ALKALC+GV W+AK V G VTKE TAGP+CR VL+++ K+LPL++ A SE+ G GG PHGY++W + L + D WQQ +S TLPS+ L + Y LGCGR PC+ TCS CWRNR G+ TV FNHWGQAP S G+G +RGG V+DAG W+ S ASRGND+E+++ A R G G+G TT+GK +FFEH GND R G+
Sbjct: 27 FRTKGAVGNANFGESKHKEVKKSATSASGRDNPVHIFRTWNDTQALKALCDGVRWSAKGRVGGVEVTKE-LTAGPLCREVLQEVFKILPLQTTPAASEDDTTGRRGGRPHGYQQWDAGLVPTRVETGLDAPAWQQAISKTLPSAEQLQKCYDDSLGCGRTAQEAPCSRRTCSFCWRNRGQGIVRQTVVVFNHWGQAPAEVSAGIGTIRGGPVKDAGT--PTWVRSAASRGNDVEIYLKAEDQRAGNRGLGRTTLGKVAYFFEHQGNDWRRGD 295
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 236 bits (601), Expect = 1.450e-61 Identity = 191/648 (29.48%), Postives = 295/648 (45.52%), Query Frame = 1
Query: 19 VWEKIGDPVKVQVDALDAPCLVLPAGTDMTSQELNEQVPTFLGEGFV--------TFLTNPRRVKEQRPWRKEGVDGLYFDR--DADSYDNVDGDPVFSTGIAVSSDGFNYWSFGGKVYNVNATYVA-LSCLSPALLRRLRSWSLV-CAGSKGRWEEEVGGLMETIQHLEKGCRARMKTQDGHSVTVFVRMGLLTAMLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDTIGFKNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALG----TFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGK--WVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAGG-GEPHGYKEWCSSLGFSSDGVPPDKLTWQQRVSLTL----PSSSDLNQRYGSLLGCGRPPASNP 1887
VWE D V + L C V+ D+ + E +P+F G GFV T L +P + PWR EG + L++DR + ++N VF T + +D F++ + GG Y + AT ++ + S A R+ +W LV + + RW++++G ++E I L+KGCRAR+ D +E+L+D Y+I N RT D + +L + T + S + GV +V+NP +K V + VR G+D+ HQD +N ++ + LL L+ G L+S K S+ PL D +DGGFSAL+G +W LSS+ L+FRP+ + SMK + G + +V V L+ A S ++ ++R+ SF + + + +R++V ++G+ G + H+G+H N D G +S+ + ES+HK K + ++SGRDN +HI R ND +A +A+ EGV W A Y K WV K+ A P CR +LR + S + A G G P G EW LG + P WQ+ + L P DL Y + CGR SNP
Sbjct: 330 VWEVTNDGVDLDTSKLVGRCEVV-GSDDVHTGEDGSALPSFRGVGFVKRLRSGRHTPLPSPDPAVKHLPWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIAD-------------------------------------------KVEEDLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDA---QNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATT-DTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVS-LMSMLGDKHGGRLCSNHQGLHFAKNATDYGELSDCHAGESRHKSFKSCAKTASGRDNEEHIVRRENDAMAAEAMAEGVRWTAWGYDKTKRGWV-KKTVQASPACRELLRTI-------SEWEIGARRHGTGRPRGIVEWNVRLGRQA--AAPSAQGWQETIGALLRRTGPGGLDLLDLYKAWFSCGRE-TSNP 917
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE) HSP 1 Score: 207 bits (527), Expect = 2.740e-56 Identity = 127/364 (34.89%), Postives = 180/364 (49.45%), Query Frame = 1
Query: 898 NKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVNGKWVTKEDCTAGPVCRTVLRDLVKVLPLESAFSENAEAGGGEPHGYKEWCSSL-GFSSDGVPPDKLTWQQRVSLTLPSSSDLNQRYGSLLGCGRPPASNPCTSPTCSLCWRNRHMGLSHNTVWCFNHWGQAPE 1986
N K+++ FL++A + GS +V R R ++PPN P+ D+T I P L PIF++ ++ YV+ + VA R + + AG + VC F L+ ACS S F VR++S T +L + +++QV+QA V+G ALGT HKG+HI N+ G V+N N E+K+K+ K + S+SGRDN +HIWR ND A+KAL +G+ W + KW + TAG CR L+D W L G + D+ WQ V TLP++ L Y LGCGR + C C+ C R GL + +V CFNHWG APE
Sbjct: 10 NSDKKIVGFLMDARDPAGSEIVRARFAWRRMLPPNVSPIADIT-----------------HIFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEP-DTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIARNVVVNGDVTNCNVEEAKNKELKASAPSASGRDNARHIWRATNDSFAIKALADGIEWTTSGWTGSKW-ERGTVTAGDPCRQTLQD---------------------------WDEDLVGTETALTGVDRADWQSVVRETLPTALQLEALYKEKLGCGREESGPLCNDDVCAFCGRGS-PGLHNGSVTCFNHWGNAPE 326
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 195 bits (495), Expect = 2.470e-52 Identity = 106/233 (45.49%), Postives = 151/233 (64.81%), Query Frame = 1
Query: 898 NKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVE--QAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKALCEGVVWAAKDYVN 1590
N K+++ F+L+AL++ S +V GR R ++P N P+ D+T+ GG++ALTG Q+W++SSI P L PIF++ + YV+ +A VA R + N G+ AG VC AF DLI ACS SSF+VR+ SFT L L + + DQV+ Q VMG ALG+ HKG+HI N+ G V+N N E+K+KQ K + S+SGRDN +H+WRT ND +A++AL +GV W A +
Sbjct: 11 NAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIAPNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWRTTNDSLAMQALADGVEWTASGWTG 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1363.6.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1363.6.8 >prot_P-littoralis_Contig1363.6.8 ID=prot_P-littoralis_Contig1363.6.8|Name=mRNA_P-littoralis_Contig1363.6.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=810bp MTSQELNEQVPTFLGEGFVTFLTNPRRVKEQRPWRKEGVDGLYFDRDADSback to top mRNA from alignment at P-littoralis_Contig1363:20161..25535- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1363.6.8 ID=mRNA_P-littoralis_Contig1363.6.8|Name=mRNA_P-littoralis_Contig1363.6.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=5375bp|location=Sequence derived from alignment at P-littoralis_Contig1363:20161..25535- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1363:20161..25535- >mRNA_P-littoralis_Contig1363.6.8 ID=mRNA_P-littoralis_Contig1363.6.8|Name=mRNA_P-littoralis_Contig1363.6.8|organism=Pylaiella littoralis U1_48|type=CDS|length=2430bp|location=Sequence derived from alignment at P-littoralis_Contig1363:20161..25535- (Pylaiella littoralis U1_48)back to top |