prot_P-littoralis_Contig136.77.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig136.77.3
Unique Nameprot_P-littoralis_Contig136.77.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length662
Homology
BLAST of mRNA_P-littoralis_Contig136.77.3 vs. uniprot
Match: A0A6H5JJ43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ43_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 7.060e-121
Identity = 312/760 (41.05%), Postives = 373/760 (49.08%), Query Frame = 0
Query:   28 DNNAFVIRLLRVFLGAAVRDXXXXXXXXPDLPSHHSSSRTSCGRRVQCAPSSLPATAA-APTTVASEQAEKVQPA--------QNIAKCEESPGPTAQQGATKGKTDIAAAAAEASATVDAREQAGCTLWDMSADERHASAMCSAGLVAVSCAVLGYCAGAAATAQLRALAVAKEEPDGSAVTKLPVILVTAAEPVEAPKAPDTALSAPSGGQEVERLREIACGLLANACSHRSLRQQIAGDPPLGEELLLAFHCTDDSASLTELLRLFSTAALM---------------------------------------------------------------------------------PTAG-----------------------------------------GLSSGLAAKDTLERLAFILENSLEEKLLARACSLAYSLMYKHGDAVIRPLVEAFRLEESLAALLNFRSTDLAYEKLGGKETGFDVLLRCLEVLSTSEYSCIGPSPPAAVALPPAVKNXXXXXXXXXXXXXXXXXXEVKGGCASALQYVENHXXXXXXXXXRTRKKTGAGEEDNLIDPAKGNDRTTAVVE-GVTTTKTQ-AMSKSDKRGSVIRGMVAALVPWEHSRQTQRAALLVLGNVLDNCLDGGPDAPSEGVKDGKYADRSASESCAEDLDKALVTSATGGQGEWANEEXXXXXXXXEVVGVDRLAKRRREFLQSVNNLVSGGDSTAAAAVADEGDGLGEELHEAVEAVRKVLEIAG 654
            D  A +IRLLR+FLGAAV D           PS   S+          AP  LPAT+  AP    S    K  P         +N  K    P     Q   + +TD+A+         DAREQAGC LWDMSADE +A AMCSAGLVAVSCAVL  CA    +A + A A A+     S+ +  PV    AA  V AP  PD         ++VERLRE+ CGLLAN  SHRSLRQQIAGD  LG+ELL AFH TDD A LTELLRLFSTAAL+                                                                                 P AG                                         GL+SG+AA++TLERLAF L+NSLEE+LLA ACSL YSLMY+HGDAVIRPL+E F LEESL +LL  RS DLAYEKLGG ETGFD LLRCLEVL+TSE S +GP    A A PP V +                          AL               + RK+    EE     P  G     A  E    T+KT+ ++S+ + RG VIRG+V+AL PWEHSR +QRAALLVLGN+L+N ++   DA + G        R ASESCA +LD+ L   A GG GEWA ++            V R+ K RREF++SV+NLV   D   AA   +E DGLGE+L EAVEA+RK+LE +G
Sbjct:    7 DEKASIIRLLRIFLGAAVGDEDHENTPLSAPPSLPDSTS---------APP-LPATSPKAPPRAESPLTGKPDPCLPGGDRLERNSPKLLGQPRKP--QRTAESETDMAS-------VPDAREQAGCALWDMSADEGNAFAMCSAGLVAVSCAVLRQCA----SAIVSAAAEARAGGLSSSKSLAPVEAKEAAMAV-APPLPDRE-------EQVERLREVTCGLLANVFSHRSLRQQIAGDLALGQELLGAFHSTDDPACLTELLRLFSTAALIKSTESAYATKAMNEDNGDAQVAGSTNDPVGDGRAATTALPETNLSGDIHGEGQTAAGALRMVAGAAGAAEAALGAVEISSKPAAGENRTAVTLVTRERNEAEATAVPASEPNTAGAALAMAAWGSAGLASGIAAEETLERLAFFLQNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEESLCSLLQSRSGDLAYEKLGGTETGFDALLRCLEVLTTSEVSGVGPPSSPAAAEPPVVVDPP------------------------ALAQDSGELSPKQQLNEQPRKRRNLAEESTEEGPTNGGGDCEAACEVQPETSKTRPSLSRGEMRGRVIRGLVSALTPWEHSRHSQRAALLVLGNILENAIE--EDAGAVGGVKSPEGARRASESCAVELDRGLAALAAGGTGEWAEDDERDP-----AAAVRRVGKSRREFVESVHNLVHSDDPVTAA---NEEDGLGEDLLEAVEAIRKILEESG 701          
BLAST of mRNA_P-littoralis_Contig136.77.3 vs. uniprot
Match: D7FSE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE1_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 1.460e-112
Identity = 322/766 (42.04%), Postives = 382/766 (49.87%), Query Frame = 0
Query:   22 SLLGEGD---NNAFVIRLLRVFLGAAVRDXXXXXXXXPDLPSHHSSSRTSCGRRVQCAPSSLPATAAAPTTVA----------SEQAEKVQPAQNIAKC--EESPG----PTAQQGATKGKTDIAAAAAEASATVDAREQAGCTLWDMSADERHASAMCSAGLVAVSCAVLGYCAGAAATAQLRALAVAKEEPDGSAVTKLPVILVTAAEPVEAPKAPDTALSAPSGGQEVERLREIACGLLANACSHRSLRQQIAGDPPLGEELLLAFHCTDDSASLTELLRLFSTAALM-----------------------------------------------------------------------PTAG-----------------------------------------GLSSGLAAKDTLERLAFILENSLEEKLLARACSLAYSLMYKHGDAVIRPLVEAFRLEESLAALLNFRSTDLAYEKLGGKETGFDVLLRCLEVLSTSEYSCIGPSPPAAVALPPAVKNXXXXXXXXXXXXXXXXXXEVKGGCASALQYVENHXXXXXXXXXRTRKKTGAGEEDNLIDPAKGNDRTTAVVE-GVTTTKTQ-AMSKSDKRGSVIRGMVAALVPWEHSRQTQRAALLVLGNVLDNCLDGGPDAPSEGVKDGKYADRSASESCAEDLDKALVTSATGGQGEWANEEXXXXXXXXEVVGVDRLAKRRREFLQSVNNLVSGGDSTAAAAVADEGDGLGEELHEAVEAVRKVLEIAG 654
            +L  EGD    NA +IRLLR+FLGAAV D           PS               AP SLP + +AP   A          S    K  P  +   C    SP     P   Q   + +TD+A+         DAREQAGC LWDMSA+ER+ASAMCSAGLVAVSCAVL  CA A  +A   A A        S+ + +P     AA  V  P  P          ++VERLRE+ CGLLAN  SHR LRQQIAGD  LG+ELL AFH TDD A LTELLRLFSTAALM                                                                       P  G                                         GL+SG+AA +TLERLAF L NSLEE+LLA ACSL YSLMY+HGDAVIRPL+E F LE+SL +LL  RS DLAYEKLGG ETGFD LLRCLEVL+TS+ S +GP                      XXXXXXXXXX                XXXXXXXXX  RK     EE     P  G +   AV E    T+KT+ ++ + + RG VIRG+V+AL PWEHSR++Q+AALLVLGN+L+N ++   DA + G        RSASESCA +LD+ L   A GG GEWA +             V+R+ K RREF++SV  LV   D   +A   +E DGLGE+L EAVEAVRK+LE +G
Sbjct:   11 NLYNEGDPSDENASIIRLLRIFLGAAVGDQDDDNTP----PS---------------APPSLPDSTSAPPLPAXXXXXXXLGQSPLTGKPDPCLSGGDCLGRNSPKLLGQPPKLQRTAESETDMAS-------VPDAREQAGCALWDMSAEERNASAMCSAGLVAVSCAVLRQCANAIVSAAAEARAGGLS----SSKSLMPAEAKEAAMAVAPPLPPR---------EQVERLREVTCGLLANVFSHRGLRQQIAGDLALGQELLGAFHSTDDPACLTELLRLFSTAALMKSTESAYDAHAAGSTNDPVGDGRAATTVSPEPNRSGEIHGEGHTGAGALRMVAGAAGAAEAASGPVELSSEPAVGDNRTAVTSAARERNEAEATAVSASAPNTEGAALAIAARGSAGLASGIAAGETLERLAFFLGNSLEERLLAWACSLTYSLMYRHGDAVIRPLIEVFGLEKSLCSLLQSRSGDLAYEKLGGTETGFDALLRCLEVLTTSKVSGVGPP---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRK---LAEEGTAEGPTNGGENCEAVCEVQPETSKTRPSLGRGEMRGRVIRGLVSALTPWEHSRRSQKAALLVLGNILENAIE--EDAGAVGGVKSTEGARSASESCAVELDRGLAALAAGGAGEWAEDGERDP-----AAAVERVGKNRREFVESVQKLVHSDDPVTSA---NEEDGLGEDLLEAVEAVRKILEESG 703          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.77.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJ43_9PHAE7.060e-12141.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSE1_ECTSI1.460e-11242.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..123
NoneNo IPR availablePANTHERPTHR23424SERUM AMYLOID Acoord: 31..394
NoneNo IPR availablePANTHERPTHR23424:SF23PROTEIN SAAL1coord: 31..394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig136contigP-littoralis_Contig136:433452..442777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig136.77.3mRNA_P-littoralis_Contig136.77.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig136 433357..443341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig136.77.3 ID=prot_P-littoralis_Contig136.77.3|Name=mRNA_P-littoralis_Contig136.77.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=662bp
MNAVDNAVDDAGGGTLPIYERSLLGEGDNNAFVIRLLRVFLGAAVRDDDD
DGGTTPDLPSHHSSSRTSCGRRVQCAPSSLPATAAAPTTVASEQAEKVQP
AQNIAKCEESPGPTAQQGATKGKTDIAAAAAEASATVDAREQAGCTLWDM
SADERHASAMCSAGLVAVSCAVLGYCAGAAATAQLRALAVAKEEPDGSAV
TKLPVILVTAAEPVEAPKAPDTALSAPSGGQEVERLREIACGLLANACSH
RSLRQQIAGDPPLGEELLLAFHCTDDSASLTELLRLFSTAALMPTAGGLS
SGLAAKDTLERLAFILENSLEEKLLARACSLAYSLMYKHGDAVIRPLVEA
FRLEESLAALLNFRSTDLAYEKLGGKETGFDVLLRCLEVLSTSEYSCIGP
SPPAAVALPPAVKNSPAVEETSTVGAETTAAAEVKGGCASALQYVENHHQ
QQQQQQLRTRKKTGAGEEDNLIDPAKGNDRTTAVVEGVTTTKTQAMSKSD
KRGSVIRGMVAALVPWEHSRQTQRAALLVLGNVLDNCLDGGPDAPSEGVK
DGKYADRSASESCAEDLDKALVTSATGGQGEWANEEEQEQEQEEEVVGVD
RLAKRRREFLQSVNNLVSGGDSTAAAAVADEGDGLGEELHEAVEAVRKVL
EIAGKLKNNQL*
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