mRNA_P-littoralis_Contig136.1.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig136.1.3
Unique NamemRNA_P-littoralis_Contig136.1.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: D7FWD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD2_ECTSI)

HSP 1 Score: 451 bits (1159), Expect = 3.440e-143
Identity = 256/356 (71.91%), Postives = 281/356 (78.93%), Query Frame = 1 
Query:  109 MFFDLNVPVLRSSVERDRSALLSKLFEYGYDCVALNTIVYGRLPKQHRCAVERIRFDPQAPSA--GRRRNNIKFREPSLLRGTARSGAGVSAPGHAATAETGPDQVTRLTVVLENPADAQLLTAGSEALQSYDVVAAVPCCQRSFEVLCKAADVDVVSLPSGKRLPFAINKKNTDAAFARGAVFEVTYSQAIQSTSSRRYLIQNCQALVKLTRGRGIIIASGAETWLHSRAPHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARKSRFRGISTGGGATGDEAGLLESLQIPKEFYLPEAVAVAPPKRGTGIDEPEVGRQGAALEREXXXXXXXXXXXXGFLSFGGTSGEMDVD 1170
            MFFDLNVPVLRSSVERDRSALLS+LFE+GYDCVALNTI+YGRLPKQHRC VERI FDP+A SA   R                       +APGH ATA +GPDQV+RLTVVLE+PADAQ LTAGSEALQSYDVVAAVPCCQRSFEVLCK +DVDV+SLPSGKRLPF INKKNTDAA +RGAVFEV+YSQAIQ++S+RR+L+ NC+ALV  TRGRGI++ASGAETWL+ R+PHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARK RFRG +  GG     A LLESLQIPKEFYLPEA AV  P+ G+                 XXXXXXXXX   GFLSFG TS EMDVD
Sbjct:    1 MFFDLNVPVLRSSVERDRSALLSQLFEHGYDCVALNTIIYGRLPKQHRCTVERIHFDPEAASAVGSRXXXXXXXXXXXXXXXXXXXXXXXAAPGHGATAASGPDQVSRLTVVLESPADAQSLTAGSEALQSYDVVAAVPCCQRSFEVLCKDSDVDVISLPSGKRLPFNINKKNTDAALSRGAVFEVSYSQAIQNSSNRRFLLSNCEALVTFTRGRGILLASGAETWLNCRSPHDVANLGQLLGLSQEQSLRAVSDTPLAVLRRAEARKGRFRGATVSGGDDPAPAQLLESLQIPKEFYLPEAAAVVGPQGGSKXXXXXX----XXXXXXXXXXXXXXXEDGGFLSFG-TSAEMDVD 351
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 4.690e-75
Identity = 183/396 (46.21%), Postives = 216/396 (54.55%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRS----------GVG---C*RDVCWR*DLSSAW*ILACFV*LRMGVLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            GCGALSG+IVKL KSLYGLRQASR            +G   C  D C    +     +L   V            ++   +   ER R     A  +      NLGELRWYSGCFYERNKE GRLTISQQT+T +LAAEYGV  G+SVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y    +LV W     + ILG+  R   +      G  +   L     A    + ADR     G  +C    +    + +                +VV   +   Q+WRFMLP+VGMPCIPVFED  G IQLA NPISNSNSK +D RHHFLR+LVERKE SVIHV S YQRADFLTK LPK+AFE HRD VMNL
Sbjct:   84 GCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVV------------HVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVAR----YCASPKLVHWNA--AMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5J9U0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U0_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 8.750e-70
Identity = 179/395 (45.32%), Postives = 214/395 (54.18%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRS----------GVG---C*RDVCWR*DLSSAW*ILACFV*LRMGVLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCS--CFLLFEDPKVRDPFNYRRRVRRTW*RCEVVIVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            GCGALSG+IVKL KSLYGLRQASR            +G   C  D C    +     +L   V            ++   +   ER R     A  +      NLGELRWYSGCFYERNKE GRLTISQQT+T +LAAEYGV  GKSVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y    +LV W     + ILG+  R   +      G  +   L     A    + ADR     G  +C       F   +     +            + ++   Q+WRFMLP+VGMPCIPVF+D  G IQLA NPISNSNSK +D RHHFLR+LVERK+ SVIHV S YQRADFLTK LP++ FE HRD VMNL
Sbjct:  554 GCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVV------------HVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGKSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPGIANAVRAVAR----YCASPKLVHWNA--AMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGXMKEILFLRQIWRFMLPQVGMPCIPVFDDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKKISVIHVPSPYQRADFLTKSLPEDTFESHRDFVMNL 930
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 6.940e-69
Identity = 183/396 (46.21%), Postives = 216/396 (54.55%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRS----------GVG---C*RDVCWR*DLSSAW*ILACFV*LRMGVLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            GCGALSG+IVKL KSLYGLRQASR            +G   C  D C    +     +L   V            ++   +   ER R     A  +      NLGELRWYSGCFYERNKE GRLTISQQT+T +LAAEYGV  G+SVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y    +LV W     + ILG+  R   +      G  +   L     A    + ADR     G  +C    +    + +                +VV   +   Q+WRFMLP+VGMPCIPVFED  G IQLA NPISNSNSK +D RHHFLR+LVERKE SVIHV S YQRADFLTK LPK+AFE HRD VMNL
Sbjct: 1420 GCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVV------------HVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVAR----YCASPKLVHWNA--AMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 2.100e-68
Identity = 181/396 (45.71%), Postives = 215/396 (54.29%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRS----------GVG---C*RDVCWR*DLSSAW*ILACFV*LRMGVLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            GCGALSG+IVKL KSLYGLRQASR            +G   C  D C    +     +L   V            ++   +   ER R     A  +      NLGELRWYSGCFYERNKE GRLTISQQT+T +LAAEYGV  G+SVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y    +LV W     + ILG+  R   +      G  +   L     A    + ADR     G  +C    +    + +                +VV   +   Q+WRFMLP+VGMPCIP+FED  G IQLA NPISNSNSK +D RHHFLR+LVERKE SVIHV S YQRADFLTK L K+AFE HRD VMNL
Sbjct:  914 GCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVV------------HVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVAR----YCASPKLVHWNA--AMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5JPC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC7_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 9.900e-66
Identity = 148/293 (50.51%), Postives = 170/293 (58.02%), Query Frame = 2 
Query: 2954 NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            NLGELRWYSGCFYERNKE GRLTISQQT+T +LAA YGV  GKSVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y     LV W    G  ILGF  R   +      G  +   L     A    + ADR     G  +C    +    + +                +VV   +   Q+WRFMLP+VGMPCIPVFED  G IQLA NPISN NSK ++ RHHFLR+LVERKE SVIHV S YQR DFLTK L K+A E HRD VMNL
Sbjct:   96 NLGELRWYSGCFYERNKETGRLTISQQTFTDELAAGYGVVGGKSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVAR----YCASPTLVHWNAAMG--ILGFARRTSHFGTSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNWNSKHINVRHHFLRELVERKEISVIHVPSPYQRGDFLTKSLSKDALESHRDFVMNL 382
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5L8D6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D6_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 1.430e-65
Identity = 147/293 (50.17%), Postives = 174/293 (59.39%), Query Frame = 2 
Query: 2954 NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPARRQT--ADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            NLGELRWYSGCFYERNKE GRLTISQQT+T +LAA+YGV  GKSVP++SGV LSDFD DEV T FPF  +       A + R   A A   + R    Y    +LV W     + ILG+  R  ++      G  +   L     A   T  ADR     G  +C    +    + +                +VV   +   Q WRFMLP+VGMPCIP+FED  G IQLA NPISNSNSK VD RHH +R+LVERKE SVIHV  +YQRADFLTK LPK+AFE HR+ VMNL
Sbjct:  142 NLGELRWYSGCFYERNKETGRLTISQQTFTDELAADYGVVGGKSVPMSSGVKLSDFDADEVTTDFPFHELVGSLMWLATQTRPDIANAVRTVAR----YCASPKLVPWNA--AMDILGYARRTSQFGISFQRGTVEGLSLQGYADADFATKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQFWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHVDVRHHLVRELVERKEISVIHVPRRYQRADFLTKSLPKDAFESHREFVMNL 428
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.840e-65
Identity = 177/390 (45.38%), Postives = 211/390 (54.10%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRS----------GVG---C*RDVCWR*DLSSAW*ILACFV*LRMGVLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHR 3766
            GCGALSG+IVKL KSLYGLRQASR            +G   C  D C    +     +L   V            ++   +   ER R     A  +      NLGELRWYSGCFYERNKE GRLTISQQT+T +LAAEYGV  G+SVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y    +LV W     + ILG+  R   +      G  +   L     A    + ADR     G  +C    +    + +                +VV   +   Q+WRFMLP+VGMPCIPVFED  G IQLA NPISNSNSK +D RHHFLR+LVERKE SVIHV S YQRADFLTK LPK+AFE H+
Sbjct: 1206 GCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVV------------HVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVAR----YCASPKLVHWNA--AMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHQ 1577
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 4.320e-65
Identity = 179/396 (45.20%), Postives = 213/396 (53.79%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRS----------GVG---C*RDVCWR*DLSSAW*ILACFV*LRMGVLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDN-----ANEARHFEACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRAL---GL*KSHILMPILPA--RRQTADR---CRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVV---IVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            GCGALSG+IVKL KSLYGLRQASR            +G   C  D C    +     +L   V            ++   +   ER R     A  +      NLGELRWYSGCFYERNKE GRLTISQQT+T +LAAEYGV  G+SVP++SGV LSDFD DEV T FPFR +       A + R   A A   + R    Y    +LV W     + ILG+  R   +      G  +   L     A    + ADR     G  +C    +    + +                +VV   +   Q+WRFMLP+VGMPCIPVFED  G IQLA NPISNSNSK +D RHHFLR+LVERKE SVIHV S YQRADFLTK LPK+AFE H  L  +L
Sbjct: 1274 GCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVV------------HVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVAR----YCASPKLVHWNA--AMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHLFLRRSL 1651
[Close]
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 1.950e-64
Identity = 174/378 (46.03%), Postives = 202/378 (53.44%), Query Frame = 2 
Query: 2687 GCGALSGVIVKL-KSLYGLRQASRSGVGC*RDVCWR*DLSSAW*IL--------ACFV*LRMG--VLF*F*WYM*MTYLP*ERGRGVTSLAVTSTGRCR*NLGELRWYSGCFYERNKEMGRLTISQQTYTQKLAAEYGVEWGKSVPLASGVNLSDFDPDEVETGFPFRVVDNANEARHF-EACAQLGMVRP*RWYTGMQRLVSWGTQRGLAILGFRFRGERWRALGL*KSHILMPILPARRQTADRCRGESSCSCFLLFEDPKVRDPFNYRRRVRRTW*RCEVVIVFEQVWRFMLPKVGMPCIPVFEDIAGTIQLAHNPISNSNSKDVDARHHFLRDLVERKETSVIHVVSKYQRADFLTKVLPKEAFEFHRDLVMNL 3784
            GCGALSG+IV L KSLYGLRQ+ R          W   L      L        AC   L  G  V+     ++   +   ER R     A  +      NLGELRWYSGC YER+KE GRLTISQQT+  +LAAEYGV  GKSVP++SGV LSDFD DE  T FPFR      E  H+ EA A LG  +    Y G+      GT  G ++ G+       +A    +  +   I+               C      E   V      +            ++   QVWRFMLPKV MPCIPVFED  G IQLA NPISNSNSK +D RHHFLR+LVERKE SVIHV S YQRADFLTK LPK+AFE H D VMNL
Sbjct: 1225 GCGALSGMIVILGKSLYGLRQSPRQ---------WHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFR------ELVHWDEAMAILGYAKR-TSYMGVS--FQRGTVEGFSLQGYADADFASKAAD--RRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKE-----------ILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEVSVIHVPSPYQRADFLTKSLPKDAFESHLDFVMNL 1571
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig136.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD2_ECTSI3.440e-14371.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFG2_9PHAE4.690e-7546.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J9U0_9PHAE8.750e-7045.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE6.940e-6946.21Integrase catalytic domain-containing protein n=18... [more]
A0A6H5JG40_9PHAE2.100e-6845.71Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5JPC7_9PHAE9.900e-6650.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D6_9PHAE1.430e-6550.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L867_9PHAE2.840e-6545.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE4.320e-6545.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K4U5_9PHAE1.950e-6446.03Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig136contigP-littoralis_Contig136:5094..16674 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWD2
Preferred nameRPP30
PFAMsRNase_P_p30
Model size4339
Max annot lvl2759|Eukaryota
KEGG koko:K03539,ko:K07881
KEGG Pathwayko03008,ko03013,ko04152,map03008,map03013,map04152
Hectar predicted targeting categoryother localisation
GOsGO:0000172,GO:0000294,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000478,GO:0000479,GO:0000956,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005655,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019222,GO:0019439,GO:0022613,GO:0030490,GO:0030677,GO:0030681,GO:0031070,GO:0031974,GO:0031981,GO:0032991,GO:0033967,GO:0034470,GO:0034471,GO:0034641,GO:0034655,GO:0034660,GO:0034963,GO:0034965,GO:0042254,GO:0042274,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904
Exons8
Evalue2.42e-156
EggNOG OGsCOG1603@1|root,KOG2363@2759|Eukaryota
Ec32 ortholog descriptionRNase P subunit p30
Ec32 orthologEc-25_000570.1
EC3.1.26.5
Descriptionribonuclease P activity
Cds size1068
COG categoryJ
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03029,ko04031,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig136.1.3prot_P-littoralis_Contig136.1.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig136 8257..16566 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789626.662068-UTR-P-littoralis_Contig136:5093..82561680789626.662068-UTR-P-littoralis_Contig136:5093..8256Pylaiella littoralis U1_48UTRP-littoralis_Contig136 5094..8256 -
1680789626.7569723-UTR-P-littoralis_Contig136:16566..166741680789626.7569723-UTR-P-littoralis_Contig136:16566..16674Pylaiella littoralis U1_48UTRP-littoralis_Contig136 16567..16674 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789626.6738734-CDS-P-littoralis_Contig136:8256..85211680789626.6738734-CDS-P-littoralis_Contig136:8256..8521Pylaiella littoralis U1_48CDSP-littoralis_Contig136 8257..8521 -
1680789626.68212-CDS-P-littoralis_Contig136:9204..93511680789626.68212-CDS-P-littoralis_Contig136:9204..9351Pylaiella littoralis U1_48CDSP-littoralis_Contig136 9205..9351 -
1680789626.6913226-CDS-P-littoralis_Contig136:9914..99961680789626.6913226-CDS-P-littoralis_Contig136:9914..9996Pylaiella littoralis U1_48CDSP-littoralis_Contig136 9915..9996 -
1680789626.7085922-CDS-P-littoralis_Contig136:10907..109681680789626.7085922-CDS-P-littoralis_Contig136:10907..10968Pylaiella littoralis U1_48CDSP-littoralis_Contig136 10908..10968 -
1680789626.7170038-CDS-P-littoralis_Contig136:11267..114201680789626.7170038-CDS-P-littoralis_Contig136:11267..11420Pylaiella littoralis U1_48CDSP-littoralis_Contig136 11268..11420 -
1680789626.725889-CDS-P-littoralis_Contig136:12435..126541680789626.725889-CDS-P-littoralis_Contig136:12435..12654Pylaiella littoralis U1_48CDSP-littoralis_Contig136 12436..12654 -
1680789626.7336879-CDS-P-littoralis_Contig136:15379..154381680789626.7336879-CDS-P-littoralis_Contig136:15379..15438Pylaiella littoralis U1_48CDSP-littoralis_Contig136 15380..15438 -
1680789626.7460515-CDS-P-littoralis_Contig136:16484..165661680789626.7460515-CDS-P-littoralis_Contig136:16484..16566Pylaiella littoralis U1_48CDSP-littoralis_Contig136 16485..16566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig136.1.3

>prot_P-littoralis_Contig136.1.3 ID=prot_P-littoralis_Contig136.1.3|Name=mRNA_P-littoralis_Contig136.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=356bp
MFFDLNVPVLRSSVERDRSALLSKLFEYGYDCVALNTIVYGRLPKQHRCA
VERIRFDPQAPSAGRRRNNIKFREPSLLRGTARSGAGVSAPGHAATAETG
PDQVTRLTVVLENPADAQLLTAGSEALQSYDVVAAVPCCQRSFEVLCKAA
DVDVVSLPSGKRLPFAINKKNTDAAFARGAVFEVTYSQAIQSTSSRRYLI
QNCQALVKLTRGRGIIIASGAETWLHSRAPHDVANLGQLLGLSQEQSLRA
VSDTPLAVLRRAEARKSRFRGISTGGGATGDEAGLLESLQIPKEFYLPEA
VAVAPPKRGTGIDEPEVGRQGAALEREEDDDEEDDDDDGGFLSFGGTSGE
MDVDT*
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mRNA from alignment at P-littoralis_Contig136:5094..16674-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig136.1.3 ID=mRNA_P-littoralis_Contig136.1.3|Name=mRNA_P-littoralis_Contig136.1.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=11581bp|location=Sequence derived from alignment at P-littoralis_Contig136:5094..16674- (Pylaiella littoralis U1_48)
CTCGTCGGAAGAGAAAAGACAGAGACAAATCAAACAAGGCATGGAGAGGA
GAACTAGACAGCGGCAGGCGAAAAAGTGACAGGACAGGAAGACTCCGCCG
CTGTCAGGATGTTCTTCGATCTCAATGTTCCGGTACTTCGTTCTTCCGTG
GAAAGAGATCGAAGTGCTCTTCTTTCGAAGCTGTTTGAATGTAAGAAAGA
TTCCTGTCGTAGATTCAAGTATTCAAAATTCCTCGTGCTTTGAATCAATA
CGCATGTTCGCGTTATAGCCACAGGCTGCGTGTTTCGTTCCCTCGACAGG
TGTAGTGCATGCTACTCCGCTCCAGCTAGTGCGCTGTAATCACCACCCTA
TGTGGTATAGTAAAGGTCCCGAGGAGAGTTCATGCGCAATGTATACAGCA
GCATCACGTTCTATACTGTGAAGCGCGGGGCAGTGATTGTACGGAAGACA
ACACACCCCCGGCGTTTGTCTCTCTGTACCCGTATACCGGATATGTCTAT
GTGTGCGTTATTCGTCCCATTATTTCTGCCCCCAGTCTATGATAGACACC
CTTTCGGTAATACCCTTATCTTTGACGTTCAGCCGAGGTCACACAGCACA
GAGGGAAGGTCACACACGAGCTTTTATTCATTAATCTTGTTTTTACTGCC
CACACCTGTCCTCCTGCGGTGCTTTCCTGTGATTTTGAATGCGAGTTGGG
TTCTCAGCTATTCCTTCCCTCTGTTTCCTACTGGTACTCACGAACATATC
GGGTTGGTCGAGTTGCTTTCGGGCGTCTTTTTGAACAGACAGCAATACCG
GTGTCGTTTGAATTTCACACGCCCACGCGTAGGTGTAGAAGTGGCGTCCA
GAATAGATAGAATGATAAGGAACACACGCTCATGTGCGGAGAGAACACAT
CACCCACAGCAGCAGCTTTCTGGCGTACCTGCACAACTGCTGTGACATGA
ACTAATCACCCCGACAAGTATGGTACCCCTCCACCACAGCAGTCCAGGAT
TCTTCTTCTTCGTACTCACTGCCGACCAACCCGTGGTTATCCTACTGTAC
TGACTACCTTTGGTACAGCAGCAGCAGCAGTTGCTGTCTGGAATGTACAG
TTTGGCGTCGTTTCGCCGTAGTTTTAGTTGTGTTTACAGAAGGTGCGCGA
GATTCACAATCTTGTCCCCGTCTCTTCTTGTCTCGGTTGCCCTCTGTCTT
CGAATGGATGGCACGTTTCCTACCACGTACTGGTAGATGGCTACGACTGC
GTCGCCTTGAACACGATCGTCTACGGCCGCCTACCCAAACAGCACGTGAG
TACATCCAGCTTTCATTAGTGTTGACTTAGTTGGTTTCTGTTGTTGCTAT
CGTTGTCGTCGGTGGCGTCGTTGATGTCGTTGACCCCAGGCCCACCGCTA
GTGCTGCTGATGGTATCACACCCTTTGTTTGGTACTTCTTTCTGCGTCTT
GCTTGCTTGCTGCTGCAGTCGAACTTCGCGCTTCTCTTTCGTTTGCAGAC
TTGCGGATGCGTCGGTTTTTGATATTTTAGTGGGTTGAAGTCACGACGGC
GTTTAGTCTCGCGATACGTTGCGATTTTATGCCCGGATGTTCGTACTTTT
CTCGTTCTCCGCTCCCCGCTGGGTGTGAGATCGTTGAGCTAACTACATCC
ACGACCAGGCATGGGATGAACAGCCAAAAAATGGGCAAACCCGACCCTTT
TTGTCGTCATTATCGGGTGTGACACCTCTTTTTATTCAGCAACCGAAACC
ACCCTTTGACGTTAGCTCATCGGCCAGAACCCTCCGCTATCCGGCACTGG
CGACGTTTCCGCCGGGTGTACCCGATTCTGGCTACTCAACCCGCGAAGGG
TACCATCCCCCCCACTCTGGAATGGCCCCAAGATTACCCGGGCTCTTTGA
CCAACAGACCACACACACACACCCCTCAGGCTCATTTTCTGCTACCGACG
GCGGCGGCCCAAAGGTTTCATGTTCCAGATTGACTCTTCCAGTTTCATTC
GCGCTCTCTCTCGATGCCTCCTCTCTCTCTCGTCCTCCACAACAACCCAA
CCAAGAGCCACAGCACAGCAGTCGAAGGAGCGATAGATCATGAGCAATGA
TACCAACCTCACCCCGTGCAGCAGCCTTTTTTAGACACGAAGTGTGTTGC
GAGCTGCCGTGGGAAAAGTTCTTCGCACACGGCAACCGCTCTTTCGCCTC
GAGCAAGAATAGCGGTGGGAAGCAGAAGGCATGCACTTTTCTGCTCCGGG
AAGGAGGAAGGCTGCCCGGCTAAAGTACGGGCCAGTCACGATCGCGTCAG
GCAAGTGGCGTGCCGACAAGGTTGTGAGCTTCACGCCAACTGTGGTGGCG
GGAAGACGCCGGGCAGGTCGTCCTCCGTATCGCATGTCGCTGACAAAGCG
GTGAAGGACAACCTGGGTATGATTGGGCCAGCCCTCAAACGGAATATGGA
GCGAGATGCGGGGATCAAAGTCGGACACCGGACGGCCACCCGACTGAAGA
ATGTCTCGCAGAAAACTACCTTGTCTGCTTTGGCGGGGCCCTGCCGGCGG
CTTTATTCACTCTGCGTCCAGCTACAGACGGGCCGCTCTTGCGCGGATAC
GGAGGTCGAAGTAAGCAACAGGTCCCTGGTGCCGCATGACTCGTGACACA
TCGATGTAGAGAGAGATGTCTAATGCAGACTTACAGACCTGTTGCTCACT
TCGACCTCCGTATCCGCGCAAGAGCGGCCCGTCTGTAGCTGGACGCAGAG
TTGAATAAAGCCGCCGGCAGGGCCCCGCCATAGCAGACAAGGTAGTTTTC
TGCGAGACATTCTTTAGTCGGGTGGCCGTCCGGTGTCCGGCTTTGATCCC
CGCATCTCGCTCCATATTCCGTTTGAGGGCTGGCCCAATCATACCCAGGT
TGTCCTTCACCGCTTTGTCAGCGACATGCGATACGGAGGACGACCTGCCC
GGCGTCTTCCCGCCACCACAGTTGGCGTGAAGCTCACAACCTTGTCGGCA
CGCCACTCGCCTGACGCGATGGTGAATGGTCCGTACTTCAGCCGGGCAGC
CTTCCTCCTTCCCTGAGCAGAAAAGTGCATGCCTTCTGCTTCCCACCGCT
ATTCTTGCTCGAGGCGAAAGAGCGGCTGCCGTGTGCGAAGAACCTTTCCC
GCGGCAGCTCGCAACACACTTCGTGTCTAAAAAACGCTGCTGCATGGGGT
GAGGTTGGTATCGTTGCTCACGATCTATCGCTCCTTCGACTGCTGTACTG
TGGCTCTTGGTTGGGTTGTTGTGGAGGACGAGAGAGAGAGGAGGCATCGA
GAGAGAGCGCGAATGAAACTGGAAGAGTCAATCTGGAACATGAAACGTTT
CTCATTGGTTCCTGGCCGCCGCCGTCGGTAGCAGATGATGGGCCTGAGGG
GTGTGTGTGTGTGGTCTGTTTGCCGATGAGCCCGGGTAATCTTGTGGCTA
TCTCAGTGTAGGGGGTATGAGAAAGCAGCCATAATCGGGCATACCCGGCG
AGAACGTGGCCAGCGCGGGGTAGCGGAGGGTTCTGGCCAAGGAGACGGCG
TCATCGGATGGTTTCGGCAACTGAATAGAAGAGGTACATACCCGACTGTG
GCTGCAAAAAAGCACCGGGTATGTCCGTTTTTGGCCATTCCTGGGTTGAA
AAGTGCAAGCAATTGGTACCGTCAACATTGCCTCGATGACGACAGGCACC
ACCGAACGGCCTGGGCGCGTGTGCACCAACATAAATGCTGCTGCTGCTGC
TGCTTCTTGGTCCAAATATTTATCCGAGCACGCCTATGTACCGCTGTTGA
GCAGAGCAGCAGTCGAAAGAAATTGATACCAGGTGGTGACGACGAAAGGA
ATTAATTCCAACCCCTCACGACGTGTGCGATTCTGCCCGCCTGCGGTGGG
ATTCCCGGTGTGTTGACAGTCTATGGCGAGGTAGAAAGCCGTACCAACGA
CGCTAGAGGGAAACGGCAAAACGCAACACACCGGAAATCTAAATTTGCAT
ACAACATGATAACAAAACAGCGATGCGCCGTGGAGCGGATACGGTTCGAC
CCGCAAGCGCCCTCGGCCGGCCGTCGACGAAACAACATAAAATTTCGGGA
ACCTTCTCTGCTTCGAGGGACGGCACGAAGCGGGGCGGGTGTTAGTGCAC
CTGGGCACGCGGCAACCGCAGAGACTGGTCCAGACCAGGTGACACGCCTG
ACAGTGGTGTTGGAAAACCCAGCGGACGCGCAGCTTCTGGTGAGAGTTTT
CTGTGTTTTGTTTTTCGTGTCTCTGCCCTGTTGGATCAGTCGCCCCCCAC
GCAATCTCGGTACCTTGAACAACAGCAGAAAGGTAGAGGGGAAGGGGAGG
GAGAAGCTGGTGTGGTGCGGACATCTGTGCGTATATATTTTGCCCGCCGA
TTGGTATCTGCCTACACTCTGCGAGTTTCCTAACCCTACACTCTGCGAGT
TTCAGTTTCAGAAGGAGTTCTAGACGAGGGGGGCAAAAACCGGGGATTCA
CTCACAAGTTTTGCTGTGCTTCACTGTTTGTTCCAGGATTTTAAATGTTC
TTTCCAGCAATTGTTTGGGGCGGGAATCAAATGGACAATCGGGAATCTCG
GGGCTGGGACACCGGGACTTGCTGGTTTTGCCCTTCCCTTAAGCGTGAAA
GACGCGATTTGTTTTTCCTAGCGTATGTTTTTTAAGCCATCGCTGCAAAG
AATCATCTATTCTGATGTAGGCAATTATAGCTCTTGTTATGAAGAGGCCG
AGAATGCACAGTGCCCATCTCTATCTCTCTTACTCTTTCTCTCGCACAAA
CACACACTTTTTTTCATTTTTTTTCGATTCTACATTTGTGTACTTTTGTA
CGATATTTTGGCCACCACACAAGACCCCCTGGGTTGAGCGGTATCATCAA
TTGTATTCCTTTTCTTTTTTCTTTCCTTTTTTTGTGTGGCCTTCTTTGAT
TTGATTTTATATTTTTCTTCCTCCTGGCACGATATGACAGCGTTGAGCTA
AGGTGAGAATCAACAACAACAACAAACAACAACAGCAACACATGCTTTTC
TGGAGGCCCCTTTTCGCTGGGGTTCGCTTCGATTGCAAGCACAAAGCGTA
TGGCAAAGCGAAATGGGTACTACTGCTGTACGTTGTGCAACGTCAAGGTG
GCCCGAGATATGCTTGAGACACGGGCTTACAGCAAGCAACTCAATGTGCT
TTCGGAATAATTCAACGCGCACGCTTGTCCTTCCTGTCGCTCCTCCACCC
TCAGACCGCAGGGAGCGAGGCTCTCCAGTCGTACGACGTCGTGGCTGCCG
TTCCGTGCTGCCAGCGGTCTTTCGAGGTTCTGTGTAAGGCCGCCGACGTG
GACGTGGTGTCGCTGCCCTCTGGAAAGCGCCTTCCGTTTGCCATCAACAA
GAAAAACGTGGGTGACGTTGGGTGGGGTTGACCGTGTACCCGATTGGTGT
GGGTGGTTGGTGGGGCTGTAAGGGGGGAGGGCACCGGGTGTGTTATCGGG
GATGATACGCCGCCAGTGTATCCCCGCCTGCTGGACCCGCCATCGACACG
GGGGCACCTGTTCTGCATCGGTGAAGATCGCTTTGACACTATTGTGACAC
CCTGTCGAATGCTCGAACCTTCTGCGGTACCTTCTGTTGCTGCTGCCGCT
GCTGTTGCTCATGTGTCGCCTGTTGCTTGCGCTTTCGGCATGTTGCGTTT
TCGCAGACTGACGCGGCGTTCGCGAGGGGAGCAGTGTTCGAGGTTACCTA
CAGCCAAGCGATTCAGAGTGAGTTTTTTTGTGTCTCCTTGTCGTTGTCGT
TTTCGTTCTCGTTGTCGTTGTTGGTGTTGATGATATTGTCGTTCGAGTCT
CGCATTACCCTTTCGCCAGAAGTCTAGCCCGAAAAGTGGTATTGCGGACA
CGAAGAAGTGCTGCCATAGGAGGAAACATATCGTTTCACACACACACACA
AACACAGGGGTGCAGCCAAAATCGTCCTGTGGTGGCTTGACGTTCGTGGG
TTGAACTCAAGGTTTGATGATGGAGGCGCGGACGAGCTATTTCCGTCCGT
TGACGTATGTTTGTTGTTTTTTTGAATGCTGGAATGCTAGGTGGGGGGGC
GTCCCGGTCTCTCCACGACGCAGGTTTCAATCCATTTGACGGCTCCTTGT
CGGTCGTTGTTTCTACTTGTACGTGATCGTAGAATTGCAGAGAGCAAACG
ATTTGCGTGGGTGTGTACGCTAACTGCTTTGTCTGGTGGATAAGTCCTCA
TCGATTAACATGTGTAGCGGCGGGCTCCGTTGTAGACGCTTTAGCGACTG
GCGAAGGATTCGGCGCCGGAGATCACTGACCGTACATGGGAGGCTATCTA
AGAGCCTCGAGTTACACTTCGTACTTCGTATATTTTCATTGGTAAGGATA
TATCCATCAGACAAAGTAATCAGCGCTGACTGCTTTGTCTGGTGGTGGAT
AAGTTATTTTCAATCACGTGTGTGTCTTTCTTTTCCCTGACCAAAATCCA
ACGTGTGTGTGTGTGTGTGTGTGCATATTTGTCGTCTCCGACCAAAATCC
AACTCGTTGTACATACGTGGGATCCTGGGCTGACGTTCGCCTCTGCCTTG
GGTGTACATAATGCGCTGCTCCTCTAAAATTGTTTTTTTTCACTTTTTTG
TTTTTGGGTGGTGGGGGCGTTACCGCAGGCACGTCTAGTCGCAGATATCT
CATTCAGAACTGCCAAGCGCTGGTCAAGCTCACCCGCGGCAGAGGGATAA
TTATCGCCAGGTACGAAATCGAGAAGAATCTGTTCGGCGGAGGAGATCGG
TGGCCCGGGGGGAACAGGGGATGAACGTTTCGCTATGCACTGGATGTATG
ACGATCAGCATCATCACGTTTTGTCTTTCTTTTAGTCGTAGTCATGTACG
GGGGTGGTTTACTTGTTTGTGCCGTTGCAGGAATGTCGAACACCTAGGAA
ACCCTACAGTTCAGCGGTATGGCATCGGGCCAAAACATACGACGGGGCGG
CACTAAATGCGGCTGTTTTTACCACGCGACTGAAGAGTTGGGCAGGCAGG
CGCTACTACTGCTGCTGTTCGTTGGCTGCTGCTGTCGCGACTGCTTCGTA
GTGAGACACGCTCTGTGGGTGCATGAGACACATGTTGTGTGGAGACCACT
AGTACGCATCCGTGTGGATAAACGAGACACGTTGTGAAGACCACTATTTC
GCACGCTGTGGCTACACGATGACACGTGTTGCGGAGACCGCAACCGCACA
CCAAAAAACGCCGCCAAATCGACGAAATACTGACTCCGCCCCCCCCCCCC
CTCCCCCCCTTGTATCCGACCAGCGGGGCAGAAACGTGGCTTCATTCAAG
GGCGCCGCACGACGTGGCCAACCTGGGGCAGCTGCTGGGTCTGTCGCAGG
AGCAGTCCCTCCGAGCAGTTTCGGACACGCCACTCGCCGTTCTCCGGCGA
GCGGAGGCTAGAAAAAGCAGGCGAGCGAGCGAACGAGCTGCCGTGCGGGT
TGCCTGCCTTTGCTCGAAACATTCACAGCAGCACAGACCTGGTTTCTTGG
TTGTATATCATACGGTACTGGTAGAGTCTGCGTATTTTATATTTTTATGT
GCGCGCCCTGGAAGATTTGGCGATATGATTTGTGCTGGAATTTCTCAGGA
GCTTTCCCGAGAATTTTTCAGTATTGTTCTCGAGGTTGACGTGCTGCTTT
GTCGACGCCGTGCCGCTTATTCGGGTCAGCCGGTTGGTTTGTAACAACGG
GTTTCAGAAAAAGAAAACGGAGAAACAATCGTCATATCCCACATAAACGT
TAATCGGAAAACAACGAAAGCTTTTTGCGTACGCTCAGGAAACACGAACT
ACTTTCCAGTAATGATCCTGCACATGGTTGTCATTGCACTTGTTGCGGCA
AGCCTGTGCGCGGTGTGCTATTGTGCGGCGGTACAGAGGTAGCCTTCTCA
TCACACGAGTAGTTTTTTTTTTAATATTTCTTGTTTCTTGTCCCTGTGTT
TGCGGTTTGCGGTCATTTTTGCGACGGTCAGGTTGCTGTTTTTTCCAGGT
GTTGTGTCCTGATGTTTTGTATTGAAAGGATTTTCTTATGTGTGCCTCGC
AGACACAAAAGGTTAACCTACCACCCCCGAACCCGCCATCGGTTATTTTT
CAGGTTCCGAGGGATATCAACCGGTGGAGGCGCCACTGGTGACGAGGCTG
GTTTGTTGGAATCCTTGCAGATCCCGAAGGAGTTTTATTTGCCGGAGGCG
GTAGCCGTTGCCCCCCCGAAGAGGGGAACGGGGATAGACGAGCCAGAAGT
AGGGCGGCAAGGTGCGGCTTTGGAAAGAGAAGAGGATGACGACGAGGAAG
ATGACGACGACGACGGGGGCTTTTTGTCGTTTGGCGGCACTTCCGGGGAG
ATGGACGTTGACACTTGATTGCTTGATTTGTTTTTGTGCTGTTGCTTGTT
GGTGTTGGTAGGTGGTGTTAGTGTTGGTGTTCGTGTTGGTGGTGGTGTTT
TGGTGGTGGTGGTGGTGGTTGTGTTGTAAACTTGTCGTGCACTTGTCGTG
CACTTGTTGTAAACTTGTTTTTGCGGTGGTTGTCAGAGAGAAAGACATTC
ATAGGTGCTTGGCTTGTTGTTGTTGCTGTTGCTGTCACTGTTCTTGCAAT
TTATTTCAAGGCGTGTCCTGCCTCTCCGCAGCAGTACCTCCAAGCCATCC
CCCGTGTGTTCAGTAGCGCGGGCGGGTATGGTGTCGAAGAGTAAGTATGA
ACGGATCTTCTAGGGAGAAGTCGGAGTAACATTGGAACATGTCCTGACAA
AAATTAATTTCAAGCCGCACACCAGTCTTATACTCTGATTTTCAAGCTGT
ATTTCTTCCTTAAATCACTTGAGATTTTCTTGGCCAGCGACGACGCCCTC
CTCTGTATTACTTTCGGTATACGCTTAACGTCCTTCCTGATGGTGCCGTC
GTTTTTTGTCGTTGGGTATCATACGACCACGCGATGGCTATTATTCGTTA
TTGCGGAAAAGAGATGGTGGCCCAACCACGTTTAACAGTCATACCCGAAA
CGTCTAGGGCAAGTAACAGACTGCAGAGCGCTCTTACCTGAACGGTGCAC
CGATCATATCGTTTGGATGTATTCATATGGGGCGCCCAGATGCTCCGTAT
CAACTGAGATAAATGAGCCATCGGGAAAGCGCGCCGCCAAGCCGGGGGGA
CGTTTTCACCTCGACTTGTGCGGGCCGCTGGCGTCTTCAATCGGGGGCAA
CCTCTACATATTCGTCGCGGTAGACAGCAACTCGCGTTGGGCGAAGGTGT
ACGGGCTGCGCAGGAAATCCGACGCGTTGGCGGCCACCAAGAGGCTCCTC
GTGGACGTTGGCCAGAACGAGCAGCTGGACCGCATCGCCTCTTTTCGCGT
CGACGGGGGCACCGAGTGGACGTCGGCGGTTTTTCGCCGTTTCTGCGACA
ACAACATCGCCCTCGAGTTCACTCCCCGGGAACACCACAGTACAACGGCG
TCGTGGAGAGCGCCATCTGGCGCATTCAAAAGACTGCGATGCTCGTCGCA
GCGGCGAGCAATGGTTCGGCATCAGCTACTCCTCCATCCCCGGCATCGAT
GAGCGCGGCGATAGGCTGTGGATGGAGTCGGCCAAGTCGGCGTGCGGCGC
CATCAACCTTTCGGCGACAAAGGCCAACCAGGGCCGCCGCAGGAGGTTTT
CACCGGGGAGACAGGGCCCTTCCGTGTCCTGCCGTTCATGCAGCCCGGGT
ACATGGACGTGTCGCGGCCCTCGAAACTCGACGACGAGGCTGCGCTCTGC
TACTTTCTAAACAGTCGCGACAACCACCCCCAGCGGCACCGTCAAAGATC
TTCGTGCTTCCATCGGTCGTGTCGTTTACACCAAAAATGTCGCGTGGCTA
CCGCAAGTGCCAGCCGGCTATGATAGGGGGTTGTGGTGCTCTGTCTGGAG
TGATTGTAAAACTGAAGAGTCTGTATGGCTTGAGGCAGGCGTCCCGCAGT
GGCGTGGGATGTTGAAGGGATGTCTGTTGGCGCTAGGATTTGAGCAGTGC
CTGGTAGATACTTGCGTGTTTCGTTTGATTGAGGATGGGCGTGTTGTTTT
GATTTTAGTGGTACATGTAGATGACATATTTGCCGTAGGAGAGAGGGAGA
GGTGTGACAAGTTTGGCAGTGACCTCAACAGGTCGGTGCCGTTAGAACCT
GGGAGAGTTGAGGTGGTACTCTGGGTGCTTTTACGAGAGGAACAAAGAGA
TGGGAAGGTTGACGATTTCTCAGCAGACTTACACGCAAAAGTTGGCGGCA
GAGTATGGAGTAGAGTGGGGCAAGAGCGTTCCTTTGGCTTCGGGAGTAAA
TCTTTCTGATTTTGATCCGGATGAGGTAGAGACAGGCTTTCCGTTTCGTG
TGGTTGACAACGCAAACGAGGCCAGACATTTCGAAGCGTGCGCGCAGCTA
GGTATGGTTCGTCCCTGAAGATGGTACACTGGCATGCAGCGATTGGTATC
TTGGGGTACGCAAAGAGGACTTGCCATCTTGGGATTTCGTTTCAGAGGGG
AACGGTGGAGGGCTTTAGGGCTTTAGAAGTCACATATACTGATGCCGATT
TTGCCAGCAAGGCGGCAGACCGCAGATCGGTGTCGGGGGGAGTCGTCATG
TAGTTGTTTCTTACTTTTCGAGGACCCAAAAGTGCGTGACCCTTTCAACT
ACAGACGCAGAGTACGTCGCACTTGGTGACGTTGTGAAGTAGTTATTGTT
TTTGAGCAGGTTTGGCGATTCATGTTGCCGAAGGTTGGTATGCCGTGCAT
CCCGGTGTTCGAGGATATTGCGGGGACGATTCAACTTGCGCACAACCCCA
TCTCGAATTCCAATTCGAAGGACGTCGATGCAAGGCATCACTTTCTGAGG
GATCTTGTAGAGAGGAAGGAAACTTCGGTGATCCACGTAGTGTCGAAGTA
CCAGCGAGCAGATTTTCTCACCAAAGTTTTGCCGAAAGAGGCTTTCGAGT
TTCACCGTGATCTGGTGATGAACCTGCAGTAGGATTTATTTTCTTAATTT
CGTGTTTTGATTTCGAGTTTTGATTTCGTACATTTTGTTGATTACATTCT
GGGCGTTGAGTGTGGATTTTGTTGTTTTGAATTATGCTTGATTTGTAGAG
AGTCATAAAGAGATACTATGTTGACTGGTTTTCCAGTGTTGAGCGTTTTT
TATTGGAATCAACAAGCTGTTGCGAGCAGGGGGGATGTTGGGTATACTCG
CAGCAGCATGTGTTTGAAACGTACCGATTTGAGTACTCCGGAGATAGATA
TGATGGAATGTGGTGAGGGGTGACGTGGAATGGATGGCGTGTGTGCGGAG
TATTTCGGGTATGTGTGCGTGAAATGTTCCGGTGTGTGCCCTCTTTGGCG
TGCACCCCTGTGCGTGATTAATAATACCTCTTCCGGCCCAGCGCTCAGAG
CCTTTCCCAAGTACACGGCCCAGAGCCACGGCCTAGAGCCCATTTCATAT
CACACGGCCGGGCGCCCACACCTCACCACACAACACCCATACACGGGCAA
ACTGCACCTCGCACCAATATCCATGAAGTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig136:5094..16674-

>mRNA_P-littoralis_Contig136.1.3 ID=mRNA_P-littoralis_Contig136.1.3|Name=mRNA_P-littoralis_Contig136.1.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1068bp|location=Sequence derived from alignment at P-littoralis_Contig136:5094..16674- (Pylaiella littoralis U1_48)
ATGTTCTTCGATCTCAATGTTCCGGTACTTCGTTCTTCCGTGGAAAGAGA
TCGAAGTGCTCTTCTTTCGAAGCTGTTTGAATATGGCTACGACTGCGTCG
CCTTGAACACGATCGTCTACGGCCGCCTACCCAAACAGCACCGATGCGCC
GTGGAGCGGATACGGTTCGACCCGCAAGCGCCCTCGGCCGGCCGTCGACG
AAACAACATAAAATTTCGGGAACCTTCTCTGCTTCGAGGGACGGCACGAA
GCGGGGCGGGTGTTAGTGCACCTGGGCACGCGGCAACCGCAGAGACTGGT
CCAGACCAGGTGACACGCCTGACAGTGGTGTTGGAAAACCCAGCGGACGC
GCAGCTTCTGACCGCAGGGAGCGAGGCTCTCCAGTCGTACGACGTCGTGG
CTGCCGTTCCGTGCTGCCAGCGGTCTTTCGAGGTTCTGTGTAAGGCCGCC
GACGTGGACGTGGTGTCGCTGCCCTCTGGAAAGCGCCTTCCGTTTGCCAT
CAACAAGAAAAACACTGACGCGGCGTTCGCGAGGGGAGCAGTGTTCGAGG
TTACCTACAGCCAAGCGATTCAGAGCACGTCTAGTCGCAGATATCTCATT
CAGAACTGCCAAGCGCTGGTCAAGCTCACCCGCGGCAGAGGGATAATTAT
CGCCAGCGGGGCAGAAACGTGGCTTCATTCAAGGGCGCCGCACGACGTGG
CCAACCTGGGGCAGCTGCTGGGTCTGTCGCAGGAGCAGTCCCTCCGAGCA
GTTTCGGACACGCCACTCGCCGTTCTCCGGCGAGCGGAGGCTAGAAAAAG
CAGGTTCCGAGGGATATCAACCGGTGGAGGCGCCACTGGTGACGAGGCTG
GTTTGTTGGAATCCTTGCAGATCCCGAAGGAGTTTTATTTGCCGGAGGCG
GTAGCCGTTGCCCCCCCGAAGAGGGGAACGGGGATAGACGAGCCAGAAGT
AGGGCGGCAAGGTGCGGCTTTGGAAAGAGAAGAGGATGACGACGAGGAAG
ATGACGACGACGACGGGGGCTTTTTGTCGTTTGGCGGCACTTCCGGGGAG
ATGGACGTTGACACTTGA
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