mRNA_P-littoralis_Contig1358.11.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: D8LJH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH1_ECTSI) HSP 1 Score: 149 bits (375), Expect = 2.040e-39 Identity = 75/154 (48.70%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 235 LRLRNRVRYPSESAFLLLLRRMRYPGRWQDLQREFGREYTQLSRIFNEVVDWAYDNHLHRVTDCLEFFAPRFPQMCKKIEAKG-GLGCEGGNFIGFIDGTLRRNTRPRGDPAVQEQLYDGHHCAHGLAWQSVVFAHGM-MEIWGPETGRRHDSF 690
+RL N + E AFLLLL RMRYPGR DL++ FGREY+QLSR+F D+ ++ H HRV D L F+ P + + KG G + GFI+GTLRR +P G +Q ++YDGHH HGLA+Q+V+ +GM M+ WGP +GRRHDS+
Sbjct: 46 VRLENGSTFSGEEAFLLLLMRMRYPGRLSDLEKYFGREYSQLSRLFRWATDFLFEMHSHRVMDNLAFWGPHLRSFARAVYRKGRAFGLTYEDICGFIEGTLRR--QPGGHDDIQREVYDGHHRDHGLAYQAVMAPNGMLMDAWGPVSGRRHDSY 197
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: A0A6P8IAB2_ACTTE (uncharacterized protein LOC116297948 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IAB2_ACTTE) HSP 1 Score: 121 bits (303), Expect = 4.910e-30 Identity = 57/116 (49.14%), Postives = 78/116 (67.24%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L SGL +L L + N Y VYGD AY + ++ FRG LT+ ++ +N +S+VR VEW FGK++Q F F+DF KNLK+ +Q VAKYY +A +LTN HTC+ GS+TG YF
Sbjct: 14 MLGESGLAVKLQRLHKPNGEPYVVYGDPAYGLTRNILSPFRGACLTNDEQEFNTRMSQVRECVEWGFGKIIQXFAFLDFKKNLKVLMQPVAKYYLVATILTNCHTCLYGSLTGSYF 129
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: A0A6S7KTU7_PARCT (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KTU7_PARCT) HSP 1 Score: 123 bits (308), Expect = 4.120e-29 Identity = 55/116 (47.41%), Postives = 80/116 (68.97%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L SGL +L L + + Y +YGD AY + ++ +RG L+DAQK +N+E+S+VRV+VEW FGK+ Q+F ++DF KNLK+ LQ + KYY + LLTN HTC+ GS+T +F
Sbjct: 174 MLGVSGLQEKLRQLTKPDGEPYVIYGDPAYGLSYNILAPYRGNNLSDAQKVFNREMSRVRVSVEWGFGKISQIFAYLDFKKNLKVLLQPIGKYYLIGALLTNCHTCLYGSLTSSFF 289
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: A0A6S7L092_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7L092_PARCT) HSP 1 Score: 121 bits (304), Expect = 8.880e-29 Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L SG+ +L +Q+ N Y +YGD AY + ++ FRG LT AQK +NK +SKVRV+VEW FGK+ Q F F+DF KN KI LQ +AKYY + LL N HTC+ GS T YF
Sbjct: 134 MLGVSGIMDKLRRIQQPNGEPYVIYGDPAYGVTDNILAPFRGVDLTVAQKEFNKRMSKVRVSVEWGFGKIAQYFAFLDFKKNQKILLQPIAKYYLVGSLLINCHTCLYGSQTSSYF 249
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: A0A7D9E049_PARCT (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9E049_PARCT) HSP 1 Score: 118 bits (295), Expect = 1.160e-28 Identity = 55/118 (46.61%), Postives = 80/118 (67.80%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQE--GNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L+ SG++ +L L++ G +Y +YGD AY + + FRG LT+ QK +NK +SKVRV+VEW FGK+ F ++DF KNLK+ LQ VAKYY + L+TN HTC+ GS++ +F
Sbjct: 27 MLAASGVSAKLEQLEDARGRGERYVIYGDPAYGVTRSILAPFRGANLTEDQKKFNKRMSKVRVSVEWGFGKICTYFAYLDFKKNLKVLLQPVAKYYIVGALMTNCHTCLYGSLSTTFF 144
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: A0A6S7IES1_PARCT (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IES1_PARCT) HSP 1 Score: 117 bits (292), Expect = 2.680e-28 Identity = 52/98 (53.06%), Postives = 69/98 (70.41%), Query Frame = 3
Query: 753 YRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFVCP 1046
+ +YGD AYP+ H+ +RG +T Q+ +NK +SKVRV+VEW FGKVVQ F F+DF KNLK+ LQ + KYYA+ V+L N HTC+ GS T +F P
Sbjct: 45 FALYGDPAYPLRMHILAPYRGVVVTRDQQLFNKRMSKVRVSVEWAFGKVVQYFAFLDFRKNLKVLLQPIGKYYAVGVILANCHTCLYGSTTSSFFNLP 142
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: A0A7D9J6I9_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J6I9_PARCT) HSP 1 Score: 115 bits (289), Expect = 5.680e-28 Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L SGL +L + + + Y +YGD AY + +++ FR GLT A+KA+N+ +SKVRV+VE FGK+ Q F+DF KN KI LQ VAKYY +A LL N HTC+ GS TG YF
Sbjct: 14 MLGESGLEDQLRNIAKPDGEPYVLYGDPAYGLTNNILAPFREAGLTAAEKAFNRAMSKVRVSVELGFGKIAQYLAFLDFKKNFKILLQPVAKYYIVASLLINCHTCLYGSATGKYF 129
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF) HSP 1 Score: 122 bits (306), Expect = 6.000e-28 Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L SGL +L LQ N Y +YGD AY + ++ FRG LT Q+ +N+ +SK+RVAVEW FGK+ Q F F+DF KN+K+ LQ V KYY +A LLTN HTC+ S TG YF
Sbjct: 269 MLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYF 384
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035) HSP 1 Score: 119 bits (297), Expect = 2.070e-27 Identity = 56/116 (48.28%), Postives = 76/116 (65.52%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQEGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYF 1037
+L SGL +L Q N Y +YGD AY + ++ +RG LTD Q+ +N ++SK+R VEW FGK+ Q+F F+DF KNLK+ LQ + KYY +AV+L N HTC+ GS TG YF
Sbjct: 173 MLGVSGLADKLRRFQRPNGEPYVIYGDPAYGLSRNILAPYRGVRLTDDQQEFNSQMSKMRCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYF 288
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Match: UPI000C6E518D (protein ALP1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E518D) HSP 1 Score: 119 bits (297), Expect = 1.020e-26 Identity = 58/119 (48.74%), Postives = 75/119 (63.03%), Query Frame = 3
Query: 690 LLSRSGLNGRLAALQ-EGNTTQYRVYGDAAYPILSHVDRGFRGEGLTDAQKAYNKELSKVRVAVEWQFGKVVQVFPFVDFAKNLKIRLQAVAKYYALAVLLTNAHTCISGSITGFYFVC 1043
+L S L LAA+ N TQ+ +YGD+ YP+ H+ FRG LT Q+ +N +S VR VEW FGK++Q+F F+DF KNLK+ LQ V K Y + LLTN HTC+ GS T YF C
Sbjct: 263 MLRESNLLEHLAAIPCSENGTQFVLYGDSGYPLRQHLITPFRGASLTPEQQVFNSRMSSVRECVEWVFGKIIQIFAFLDFKKNLKLFLQPVGKLYIVGALLTNCHTCLYGSATSDYFNC 381 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1358.11.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1358.11.3 >prot_P-littoralis_Contig1358.11.3 ID=prot_P-littoralis_Contig1358.11.3|Name=mRNA_P-littoralis_Contig1358.11.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp MVVMVVCRIWRDETELAPTIRGGEPVIDDLTDDEAWANYRFRKPDLKRLFback to top mRNA from alignment at P-littoralis_Contig1358:20700..22858- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1358.11.3 ID=mRNA_P-littoralis_Contig1358.11.3|Name=mRNA_P-littoralis_Contig1358.11.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=2159bp|location=Sequence derived from alignment at P-littoralis_Contig1358:20700..22858- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1358:20700..22858- >mRNA_P-littoralis_Contig1358.11.3 ID=mRNA_P-littoralis_Contig1358.11.3|Name=mRNA_P-littoralis_Contig1358.11.3|organism=Pylaiella littoralis U1_48|type=CDS|length=654bp|location=Sequence derived from alignment at P-littoralis_Contig1358:20700..22858- (Pylaiella littoralis U1_48)back to top |