mRNA_P-littoralis_Contig1358.6.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 162 bits (410), Expect = 8.040e-49 Identity = 85/120 (70.83%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 31 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 390
MR GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+F RY+S +PRA P VEG ASQESTPASAGQT V N Y
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQESTPASAGQTPVVFNSY 120
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 174 bits (441), Expect = 2.350e-48 Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 4 DVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 390
D+ E+R+GHM GLGSH NPT +AKERA RGDL RSLHG SRA HN+NAR+G+D+IASG R RI+LP+T+ ERSATMR S N +AV+FPRYIS D+P A PVV GSASQEST A AGQT V NPY
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVVGGSASQESTAAPAGQTPVVFNPY 658
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.270e-39 Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 1
Query: 1 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 303
+D VE+RFGH R GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +P
Sbjct: 66 RDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKP 166
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5JS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS87_9PHAE) HSP 1 Score: 138 bits (347), Expect = 7.630e-39 Identity = 68/100 (68.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query: 4 DVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 303
D+VE+R+ HMR LGS+ NPTA QAKERAARGDL RSLHG SRANHN+N R+G+++IASG R RIMLP+T+ ERSATMR S N+ +AV+FPRYIS +P
Sbjct: 57 DIVEHRYAHMRQSLGSNSNPTAAQAKERAARGDLYRSLHGVSRANHNKNERKGEEFIASGIRGRIMLPVTDAERSATMRAPSRNSVSAVMFPRYISIHKP 156
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 143 bits (360), Expect = 9.740e-37 Identity = 72/117 (61.54%), Postives = 88/117 (75.21%), Query Frame = 1
Query: 1 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTP 351
QDV+E+ FGHMR GLGSHRNPTA QAKER ARGD+ R LHG RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS +R + ++ AVL P YIS P A PV +GSA + P
Sbjct: 659 QDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVADGSAVESGAP 775
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 129 bits (323), Expect = 4.740e-36 Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 1
Query: 31 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 303
MR LGSH NP A QAKER ARGDL RSLHG SRANHN+NAR+G+D+IASG R RIMLP+T+ ERSATMR S N +AV+FPRYIS D+P
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISIDKP 91
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5KZP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP5_9PHAE) HSP 1 Score: 130 bits (326), Expect = 3.800e-35 Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 7 VVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 390
V + G+ +G GS R DLNR LHG SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +PRA P VEGSASQESTPASAGQ V NPY
Sbjct: 72 VAQKPDGYESEGTGSTR--------------DLNRGLHGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKPRADPTVEGSASQESTPASAGQIPVVFNPY 185
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 129 bits (323), Expect = 4.280e-33 Identity = 73/130 (56.15%), Postives = 90/130 (69.23%), Query Frame = 1
Query: 1 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 390
Q ++E+RF +R GLG+ RNPTA QAKER+ RGDLNR LHG SRAN NRNAR G D+I S YR+RIML +T+ E + +R S N+P AVL PRYIS + AAPVVE PA+ G + +VNPY
Sbjct: 237 QIILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAAPVVEAPV-----PAAQGSST-IVNPY 360
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 118 bits (296), Expect = 4.610e-28 Identity = 68/121 (56.20%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 28 HMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQESTPASAGQTIEVVNPY 390
H+R GLG+ RNPTA QAKER+ RGDLNR LHG SRAN NRNAR G D+ S YR RIML +T+ + +R S N+P AVL PRYIS + A PVVE S PA+ G + +VNPY
Sbjct: 918 HIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAATPVVE-----TSVPAAQGSST-IVNPY 1032
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 9.790e-21 Identity = 58/101 (57.43%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 1 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 303
QD+VE+R+GHM LGSH NPTA QAKERAA+ DL RSLHG SRANH AR+G+D+IASG R RIMLP S R ++ A L RY+S D P
Sbjct: 144 QDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIMLP------SDRRRAVCYD--AGALEERYLSCDVP 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1358.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1358.6.1 >prot_P-littoralis_Contig1358.6.1 ID=prot_P-littoralis_Contig1358.6.1|Name=mRNA_P-littoralis_Contig1358.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASback to top mRNA from alignment at P-littoralis_Contig1358:13093..13547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1358.6.1 ID=mRNA_P-littoralis_Contig1358.6.1|Name=mRNA_P-littoralis_Contig1358.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=455bp|location=Sequence derived from alignment at P-littoralis_Contig1358:13093..13547+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1358:13093..13547+ >mRNA_P-littoralis_Contig1358.6.1 ID=mRNA_P-littoralis_Contig1358.6.1|Name=mRNA_P-littoralis_Contig1358.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=369bp|location=Sequence derived from alignment at P-littoralis_Contig1358:13093..13547+ (Pylaiella littoralis U1_48)back to top |