mRNA_P-littoralis_Contig1358.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 289 bits (740), Expect = 7.380e-87 Identity = 138/189 (73.02%), Postives = 165/189 (87.30%), Query Frame = 2
Query: 668 GNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 1234
GNFGRSEYAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSHRNPTA QAKER ARGD+ R LHG RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS +R
Sbjct: 550 GNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIR 738
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 239 bits (609), Expect = 1.350e-73 Identity = 126/189 (66.67%), Postives = 144/189 (76.19%), Query Frame = 2
Query: 635 CLHRHLQRQVIGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLP 1201
C+ H GNFGRS+YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N R QD+VE+R+GHM LGSH NPTA QAKERAA+ DL RSLHG SRANH AR+G+D+IASG R RIMLP
Sbjct: 31 CVRIHA-----GNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIMLP 209
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 228 bits (581), Expect = 4.560e-63 Identity = 114/220 (51.82%), Postives = 145/220 (65.91%), Query Frame = 3
Query: 3 QRMVMTVARALATANQFKGFDVGCLVCDGAQEHRSHQLRAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGK 662
QRM++ V R LA A+ K FDV +CDGA EHRS Q A F + +G E SFA F V F HPVH +FNMSDP HILKKI NA WHSD+ KQR L MWC + K +FSLKT +R Y VE D DS++ EER A+++ F + G FNR ++ CMNV +S+KV+SGT+VR I +V+ ++ T GESPDL L CY LA ++ F+DIFNG+
Sbjct: 716 QRMLIRVMRYLAMAHPDKAFDVVATICDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGE 935
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.310e-61 Identity = 113/219 (51.60%), Postives = 142/219 (64.84%), Query Frame = 3
Query: 3 QRMVMTVARALATANQFKGFDVGCLVCDGAQEHRSHQLRAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 659
QRM++ R LA A+ K FDV CDGA EHRS Q A F + +G E SFA F V F HPVH +FNMSDP HILKKI NA WHSD+ KQR L MWC + K +FSLKT +R Y VE D DS++ EER A+++ F + G FNR ++ CMNV +S+KV+SGT+VR I +V+ ++ T GESPDL L CY LA ++ F+DIFNG
Sbjct: 625 QRMLIRAMRYLAMAHPDKAFDVIATECDGAPEHRSFQTHAAILGFCHWIKGPKEGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNG 843
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 191 bits (485), Expect = 4.250e-50 Identity = 95/165 (57.58%), Postives = 114/165 (69.09%), Query Frame = 2
Query: 518 GAIGDDGSYHRQGSVRPRDHGRITRPGVGVLRSTSVEG*CLHRHLQRQVIGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVEN 1012
GAI DDG+YHR RP D G+ R +G L T VE L RH Q + NFGRS+YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ L D P ++N R+ Q +N
Sbjct: 380 GAIRDDGTYHRADPARPLDRGKTPRLAIGELSGTRVEDGRLRRHFQAR---NFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 187 bits (475), Expect = 4.130e-49 Identity = 106/258 (41.09%), Postives = 137/258 (53.10%), Query Frame = 3
Query: 3 QRMVMTVARALATANQFKGFDVGCLVCDGAQ----------------------------------------EHRSHQLRAGTFKFGAFSQGDAEKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFN 656
QRM++ V R+LA A+ K FDV VCDGA + RS Q A F + +G E SF F V HPVH +FNMSDP HILKKI NA WHSD+ KQR L MWC + K +FSLKT +R Y VE D +S++ EER A+++ F + FNR ++ CMNV +S+KV+SGT+VR I +V+ +R T GE PDL L CY ++ F+DIFN
Sbjct: 483 QRMLIRVMRSLAMAHPDKAFDVIATVCDGAPGQLGEVTLVVAKWMTLERPCVEPYFMIGPFPLVAPSRTPLDSRSFQTHAAISGFCRWIKGPQEGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYEG---HLNDFVDIFN 737
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.050e-44 Identity = 93/198 (46.97%), Postives = 131/198 (66.16%), Query Frame = 2
Query: 668 GNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRN--ARRGQDYIASG--YRARIMLPITEGERSATMR 1234
GN+GRS+ RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++PR+ QD+ E+RF H+R LG+HRNPTA +AK+R+A GDL R+ +G+ R N +RN AR G D+ G + I+L +T+ E +R
Sbjct: 65 GNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVR 262
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 165 bits (417), Expect = 6.680e-41 Identity = 88/221 (39.82%), Postives = 129/221 (58.37%), Query Frame = 3
Query: 6 RMVMTVARALATANQFKGFDVGCLVCDGAQEHRSHQLRAGTFKFGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 659
RM+ + L A++ K FDV VCDGA EHRS Q T F +++ D+ E+ ++PVAF+HP H GP+FNMSDP H+LKK+ NA W+S L K+R L +W +L FSLKT E+A+R E + + ER A++ F + C +R+S CM+V +S+K +S T + +I Q + + + P EL CYA +A ++ F+DI NG
Sbjct: 474 RMLDEITNKLYEAHEDKKFDVIGTVCDGAAEHRSFQQHFATTTFSEWAKSDSVFEQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNG 694
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: D8LK65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK65_ECTSI) HSP 1 Score: 150 bits (380), Expect = 4.730e-39 Identity = 79/174 (45.40%), Postives = 105/174 (60.34%), Query Frame = 3
Query: 6 RMVMTVARALATANQFKGFDVGCLVCDGAQEHRSHQLRAGTFKFGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSK 518
RM+ + +L A+ K FDV VCDGA EHRS Q F +++GD+ EK +F VAF+HP HGGP+FNMSDP H+LKK+ NA WHSD+ KQR L +W + + + V FSLKT E+ ++ E G S E+ A + F P F RNS NCM+VG+S+K
Sbjct: 88 RMLDDIMTSLYQAHSDKNFDVIGTVCDGAAEHRSFQKYLAEIAFSEWARGDSAFEKRMGDFKVAFKHPSHGGPVFNMSDPVHLLKKVVNALWHSDIPSKQRDLKKLWYNEAAEDYEWVSFSLKTLEKVWKEEEAGGGVRSVAEQAAHLIRFLKFDPEMFTRNSHNCMSVGLSAK 261
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 150 bits (378), Expect = 4.710e-36 Identity = 93/222 (41.89%), Postives = 126/222 (56.76%), Query Frame = 3
Query: 6 RMVMTVARALATANQFKGFDVGCLVCDGAQEHRSHQLRAGTFKFGAFSQGDA--EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA--MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG 659
RM+ + L A+ K DV VCDGA EHRS Q + T FG ++ + E+ FA+FP+AF HP HG P+FNMS PPH+L + NA W+S L KQR L W D E V FSLKT E + E G SLS E +++ F +P +RNS NCM+V +S+K +S T V + Q +++ SP+ E+ CYA LA ++ F+DI NG
Sbjct: 259 RMLDEIMLRLYEAHPDKKIDVIGTVCDGAGEHRSFQTKLATSTFGEWADPKSRLEERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFE-WVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQ-EKLA---SPNGEIACYAELAEVMNDFLDIMNG 474 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1358.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1358.5.1 >prot_P-littoralis_Contig1358.5.1 ID=prot_P-littoralis_Contig1358.5.1|Name=mRNA_P-littoralis_Contig1358.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp MVMTVARALATANQFKGFDVGCLVCDGAQEHRSHQLRAGTFKFGAFSQGDback to top mRNA from alignment at P-littoralis_Contig1358:10500..13335+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1358.5.1 ID=mRNA_P-littoralis_Contig1358.5.1|Name=mRNA_P-littoralis_Contig1358.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2836bp|location=Sequence derived from alignment at P-littoralis_Contig1358:10500..13335+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1358:10500..13335+ >mRNA_P-littoralis_Contig1358.5.1 ID=mRNA_P-littoralis_Contig1358.5.1|Name=mRNA_P-littoralis_Contig1358.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig1358:10500..13335+ (Pylaiella littoralis U1_48)back to top |