prot_P-littoralis_Contig1358.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1358.2.1
Unique Nameprot_P-littoralis_Contig1358.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length56
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1358.2.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.520e-9
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   29 DLIQGNLAKGDGRGYRFHPSTLKFCIYY 56
            DLIQGNL+KGDGRGYRFH ST+KFCIYY
Sbjct:  260 DLIQGNLSKGDGRGYRFHLSTMKFCIYY 287
[Close]
BLAST of mRNA_P-littoralis_Contig1358.2.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.080e-9
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   29 DLIQGNLAKGDGRGYRFHPSTLKFCIYY 56
            DLIQGNLAKG+GRGYRFH STL+FCIYY
Sbjct:  235 DLIQGNLAKGNGRGYRFHESTLRFCIYY 262
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1358.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JR14_9PHAE1.520e-989.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRH8_9PHAE2.080e-989.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1358contigP-littoralis_Contig1358:8752..9148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1358.2.1mRNA_P-littoralis_Contig1358.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1358 8752..9148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1358.2.1 ID=prot_P-littoralis_Contig1358.2.1|Name=mRNA_P-littoralis_Contig1358.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=56bp
CRRSKGTLSTSFSSTRIRGSCWTRSSRRDLIQGNLAKGDGRGYRFHPSTL
KFCIYY
back to top