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Homology
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: D8LP13_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP13_ECTSI) HSP 1 Score: 871 bits (2250), Expect = 8.360e-288 Identity = 477/596 (80.03%), Postives = 519/596 (87.08%), Query Frame = 1
Query: 1 AILAREIAEEAQAHGWLLRLQMELSDALIGKEALERLPDAALNRLDSLRWEKQRADRMIESRRRVAELREGLVEEGRRRRQLYGERKWAAQSELRRVLAERAAVGEKGGMLRLLLKVGDATLIARGSTLEAKMKEAAEDMEGIGTEGTVVPGEAFSAEREWVSEEFQEANAELKGWEEKLAEMVQVRVLTRRRETTVGELVLGAARGALPPPHPDQWLPKADLQRHEDEVRLLLERHERELRAEQEAVEASRVEVREAIRDAAILRAKLGAIEGWRDHEILVLRTAGRDAVDSLKDLLEKQRKESALRIDKLEQALSNLRKEYNEVRAELTARIERLNRGHSNTEAWVKALRHDLAEERATRENAEERLAVQTGRAKVSGEKLRSELRAERMHSLRLELWIAAPHDEIRCLIKTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLLCTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLRRLAARASGALGWNGRTEARVLAWDIHRHWNLWVQSCCPAEEARLRERGRTFEDPEEFRHADQISMPLSSSGPSYTPREEQARSTPTRSQLLSEEQG 1788
A LA+EIAEEA+AH WLLRLQ+EL DAL KEALERLPDAALNRLD+LRWE++RA RMIE RRRVAELRE LVEEGRRRRQLY ERKW QSE RR+LAERAAVGEK GM+RLL+KVG ATL+A+ ST EA+ KEAAED +G+GTEGTV PG+ +SA R+WVSEEFQEA E K WE+KLAEMV++R L RRRETTVGELV GAARGALP PHPDQWLPKA+ QRHEDEVRLLL RH RELR EQEAVE+S V VREA RD AIL+AKLGAIEGWRDHEIL LRTAGR+AVDSLK LLEKQRKESA RIDKLEQALS LRKEYNEVRAELTARIE+LNRG SNTEAWVKALRHDLA+ERA RE AE+RLA+ RA+V EKLR+ELRAERMHSLRLELWIAA HDEIR IKTQEEMRRL ALER+EHER+ REERHKVWR TA+RLLCTSVD LFLFFAQRLANLAGSRRTHNDALRANGAV+VLAA+CRGPRKDLRRLAARA GALGWNG TEARVLAWDI+RHW+LWVQSCCPAEEARL ERGRTF+ PEEFRHADQIS P S S S EQA +P LLS+++G
Sbjct: 1304 ATLAKEIAEEARAHEWLLRLQVELPDALRDKEALERLPDAALNRLDTLRWEERRAGRMIECRRRVAELRESLVEEGRRRRQLYEERKWVVQSEFRRLLAERAAVGEKEGMIRLLVKVGHATLVAQRSTFEARKKEAAEDKDGVGTEGTVSPGDVYSAHRDWVSEEFQEAAKEQKRWEDKLAEMVRIRELARRRETTVGELVQGAARGALPAPHPDQWLPKAEKQRHEDEVRLLLGRHARELRVEQEAVESSCVRVREAARDVAILKAKLGAIEGWRDHEILTLRTAGREAVDSLKGLLEKQRKESAARIDKLEQALSELRKEYNEVRAELTARIEQLNRGRSNTEAWVKALRHDLAQERAKREAAEDRLAIVKDRARVLSEKLRTELRAERMHSLRLELWIAALHDEIRFHIKTQEEMRRLQALERIEHERQKREERHKVWRHRTAIRLLCTSVDGLFLFFAQRLANLAGSRRTHNDALRANGAVEVLAAVCRGPRKDLRRLAARALGALGWNGHTEARVLAWDIYRHWDLWVQSCCPAEEARLLERGRTFDGPEEFRHADQISAPPSPSPASAW--HEQASRSPNSPPLLSKQRG 1897
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: A0A6H5KXM7_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM7_9PHAE) HSP 1 Score: 717 bits (1852), Expect = 1.380e-240 Identity = 414/604 (68.54%), Postives = 456/604 (75.50%), Query Frame = 1
Query: 61 QMELSDALIGKEALERLPDAALNRLDSLRWEKQRADRMIESRRRVAELREGLVEEGRRRRQLYGERKWAAQSELRRVLAERAAVGEKGGMLRLLLKVGDATLIARGSTLEAKMKEAAEDMEGIGTEGTVVPGEAFSAEREWVSEEFQEANAELK-----GWEEKLAEMVQVRVLTRRRETTVGELVLGAARGALPPPHPDQWLPKADLQRHEDE-----------------------VRLLLERHERELRAEQEAVEASRVEVREAIRDAAILRAKLGAIEGWRDHEILVLRTAGRDAVDSLKDLLEKQRKESALRIDKLEQALSNLRKEYNEVRAELTARIERLNRGHSNTEAWVKALRHDLAEERATRENAEERLAVQTGRAKVSGEKLRSELRAERMHSLRLELWIAAPHDEIRCLIKTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLLCTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLRRLAARASGALGWNGRTEARVLAWDIHRHWNLWVQSCCPAEEARLRERGRTFEDPEEFRHADQISMPLSSSGPSYTPREEQARSTPTRSQLLSEEQG 1788
Q+ELSDAL KEALERLPDAALNRLD+LRWE++RA RMIE RRRVAELRE LVEEGRRRRQLY ERKWA QSE RR+LAERAAVGEK GM+RLL+KVG ATL+A+ ST EA+ KEAAED +G+GTEGTV PGE + R+WVSEEFQEA E K GWEEKLAEM+++R L RRRETTVGELVLGAARGALPPPHPDQWLPKA+ QRHEDE +RLLL RH RELR EQEAVE+S V V EA RD AIL+AKLGAIEGWRDHEIL LRT G++AVDSLK LLEKQR ESA R DKLEQALS LRKEYNE V EKLR+ELRAERMHSLRLELWIAA DEIR IKTQEEM+RL ALER+EHER+ REERHKVWR TA+RLLCTSVD+LFLFFAQRLANLAGSRRTHNDALRANGAV+VLAA+CRGPRKDLRRLAARA GALGWNG TEARVLAWDI+RHW+LWVQSCCPAEEARL +RGRTF+ PEEFRHADQ+S P S S S +EQA ++P LLS+++G
Sbjct: 26 QVELSDALRDKEALERLPDAALNRLDTLRWEERRAGRMIECRRRVAELRESLVEEGRRRRQLYEERKWAVQSEFRRLLAERAAVGEKEGMIRLLVKVGHATLVAQRSTFEARKKEAAEDKDGVGTEGTVSPGEVYFEHRDWVSEEFQEAAKEQKREEDWGWEEKLAEMLRIRELARRRETTVGELVLGAARGALPPPHPDQWLPKAEKQRHEDEAQTPVKKINLTAAPFVCPPGQTKLRLLLGRHARELRVEQEAVESSYVRVGEAARDVAILKAKLGAIEGWRDHEILTLRTTGKEAVDSLKGLLEKQRTESAARTDKLEQALSELRKEYNE----------------------------------------------------VLSEKLRTELRAERMHSLRLELWIAALRDEIRFHIKTQEEMKRLQALERIEHERQKREERHKVWRHRTAIRLLCTSVDTLFLFFAQRLANLAGSRRTHNDALRANGAVEVLAAVCRGPRKDLRRLAARALGALGWNGHTEARVLAWDIYRHWDLWVQSCCPAEEARLLKRGRTFDGPEEFRHADQMSAPPSPSPASAW--QEQANTSPKSPPLLSKQRG 575
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: A0A7S1XVT1_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVT1_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.590e-43 Identity = 135/429 (31.47%), Postives = 225/429 (52.45%), Query Frame = 1
Query: 394 KMKEAAEDMEGIGTEGTVVPGEAFSAEREWVSEEFQEANAELKGWEEKLAEMVQVRVLTRRRETTVGELVLGAARGALPPPHPDQWLPKADLQRHEDEV---RLLLERHERELRAEQE----AVEASRVEVREAIRDAAILRAKLGAIEGWRDHEILVLRTAGRDAVDSLKDLLEKQRKESALRIDKLEQALSNLRKEYNEVRAELTARIERLNRGHSNTEAWVKALRHDLAEERATRENAEERLAVQTGRAKVSGEKLRSELRAERMHSLRLELWIAAPHDEIRCLIKTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLLCTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLRRLAARASGALGWNGRTEARVLAWDIHRHWNLWVQSCCPAEEARLRERGRTFED 1659
++ EA ED EG T G V + E++W SE + +A+ K ++L + + R +R + L+ + GA D W ++D R + + R + E E +LRAE E + E + + RD +L+ A EI L+ + +V LK+ + ++ E+ ++KLE+AL+ L +++N R ++ A++E + +T A+ K L+ ++ E RE EE++ + + + LR+E+RAER H+ RLELWI++ D+++ +K + A + V+ ++W+ T++ ++ +VD LF+FF QR NLAGSR +NDA R N AV++ A C+ P +LRRL A+ LGW+G E RVL WDI ++W +V P E +LR+ G TFED
Sbjct: 1 QLLEAREDREGDHTIG--VDSSEYHPEKKWKSEAYVDAHYNWKSESDRLKKAKEAREFVLQRHSRTRALLTNHSPGADAGLGDDSWTMQSDGVRLREALAAQRRVFEIREGKLRAELEKSKDSGEGQKSLIHRLTRDLHVLKVVSAA-------EIDSLQESCEKSVSILKEEMNRKASEADFEVNKLEEALAELSRDFNATRNDMLAQLEAVKTKERDTIAYNKTLQREMRLEVLRREVLEEQITNIIAQWRQETDNLRAEIRAERAHTGRLELWISSLRDDVKNYLKIIDGRNAKIASMEQMFKDEVKALNFEIWKFMTSLHIMSMNVDHLFVFFCQRCVNLAGSRARYNDAPRGNRAVEIFTAFCKSPVPELRRLGAKVLAGLGWDGFIEERVLGWDIVQNWRRYVDRVIPIELEKLRKLGLTFED 420
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: A0A7S3URI4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URI4_HETAK) HSP 1 Score: 134 bits (338), Expect = 1.110e-31 Identity = 75/175 (42.86%), Postives = 111/175 (63.43%), Query Frame = 1
Query: 1147 LRSELRAERMHSLRLELWIAAPHDEIRCLI----KTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLLCTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLRRLAARASGALGWNGRTEARVLAWDIHRHWNLWVQSCCPAEEARLRERGRTFED 1659
L+ EL ER HS R+ LWIA H +++ + + +E+ R+ + +E +RR+R + W+ ++ +L T VDSLFLFFAQRLANLAG+RR +N+ LR NGA+ VL +L +GPR+++R LA+RA GWNG E R++ W+ RHW WV+ P E ++R FE+
Sbjct: 9 LKDELWRERAHSNRVRLWIAGMHADVKHYLYEIRRREEQQRQTEMADEIE-KRRLR---FQNWQNLASIYILFTDVDSLFLFFAQRLANLAGARRMYNERLRENGALDVLLSLSKGPRQEIRALASRALAGFGWNGFVEHRIVGWNCKRHWQEWVKRVIPTREHQMRALRVRFEE 179
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: F0YN92_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN92_AURAN) HSP 1 Score: 128 bits (321), Expect = 5.500e-27 Identity = 88/213 (41.31%), Postives = 115/213 (53.99%), Query Frame = 1
Query: 1033 EAWVKALRHDLAEERATRENAEERLAVQTGRAKVSGEKLRSELRAERMHSLRLELWI---AAPHDEIRCLIKTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLLCTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLRRLAARASGALGWNGRTEARVLAWDIHRHWNLWVQSCCPAEEA--RLRERGRTFE 1656
EA +ALRH L E A R + + T + R E+ ER HS RLELW+ A R + +E + ++ +R +R + VWRQ TA L V SLFLFFAQRLA ++G+ RT N+ALRANGA VLAA+CR PR++LRRLAA+A +L WNG + R DI W LWV +A +L + GR E
Sbjct: 1405 EALSEALRHSLGVEEARRRVRDLAILKMTKLLAELRARSRDEIYYERAHSARLELWVHTMLASFSRARTALVHREALLDQQKTLDMQAQRALRLD---VWRQTTAAHTLGIDVSSLFLFFAQRLATMSGAHRTFNNALRANGAALVLAAMCRSPRRELRRLAAKALASLAWNGHADCRSFGADIREQWRLWVDVAVSRAKACIQLAQSGRELE 1614
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: A0A8J2SKP7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKP7_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.690e-23 Identity = 74/191 (38.74%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 1036 AWVKALRHDLAEERATRENAEERLAVQTGRAKVSGEKLRSELRAERMHSLRLELWI---AAPHDEIRCLIKTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLLCTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLRRLAARASGALGWNGRTEARVLAWDIHRHWNLWV 1599
A +ALRH L A ++ E ++ T + R E+ ER HS RL+LW+ A I+ +++ +E + L+ + ++ E R R RH++WRQ A + L +LFLFFAQR+A ++G+ +++NDALRANGA VLAA+CR PR++LR L A+A AL WN +R+L + + W WV
Sbjct: 1416 ALCEALRHRLGLAHAQQKVQELKILKLTKTIALLRACSRDEIYYERAHSARLKLWVHTMVAGFVRIKSMLRHRETL--LHRQKALDLEAR-RSLRHEIWRQQNATQALGLDTSALFLFFAQRVAVMSGAHKSYNDALRANGATLVLAAMCRSPRRELRCLGAKALSALTWNSHVNSRLLGFQVLEQWQRWV 1603
BLAST of mRNA_P-littoralis_Contig1355.5.2 vs. uniprot
Match: A0A7S2CFR5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFR5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.840e-8 Identity = 42/127 (33.07%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 631 PPHPDQWLPKADLQRHEDEVRLLLERHERELRAEQEAVEASRVEVREAIRDAAILRAKLGAIEGWRDHEILVLRTAGRDAVDSLKDLLEKQRKESALRIDKLEQALSNLRKEYNEVRAELTARIERL 1011
PPHPDQW+PKA+ RHE+E+ L R + +R ++ V+A R A + A ++ + E+ L+ A ++ LK +L Q E +L + + ++AL+ L +EYN VR++L I+ L
Sbjct: 5 PPHPDQWMPKAERARHEEELYALKLRLDATVRQMKDEVKAHRERRHVATSELAHMQERYRIKLDIHGEEVDSLKQAAEESAHMLKLMLSTQHDEMSLEVQRYQRALAELAREYNGVRSKLLGEIDGL 131
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D8LP13 |
| Preferred name | VAC8 |
| PFAMs | Arm |
| Model size | 1808 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K08332 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000011,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0006914,GO:0006996,GO:0007033,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009607,GO:0009987,GO:0016020,GO:0016043,GO:0016050,GO:0016236,GO:0016237,GO:0022406,GO:0022607,GO:0030447,GO:0030448,GO:0031090,GO:0032258,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034727,GO:0036180,GO:0040007,GO:0042144,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043495,GO:0044085,GO:0044182,GO:0044232,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044804,GO:0048284,GO:0048308,GO:0050896,GO:0051179,GO:0051640,GO:0051641,GO:0061024,GO:0061025,GO:0061919,GO:0070727,GO:0070925,GO:0071255,GO:0071561,GO:0071562,GO:0071563,GO:0071840,GO:0072665,GO:0097576,GO:0098588,GO:0098805,GO:0098852,GO:0140056 |
| Exons | 12 |
| Evalue | 1.37e-288 |
| EggNOG OGs | KOG4224@1|root,KOG4224@2759|Eukaryota |
| Description | nucleus-vacuole junction assembly |
| Cds size | 1806 |
| COG category | S |
| BRITE | ko00000,ko03029,ko04131 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789625.104957-CDS-P-littoralis_Contig1355:15374..15629 | 1680789625.104957-CDS-P-littoralis_Contig1355:15374..15629 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 15375..15629 - |
| 1680789625.122231-CDS-P-littoralis_Contig1355:16286..16390 | 1680789625.122231-CDS-P-littoralis_Contig1355:16286..16390 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 16287..16390 - |
| 1680789625.135929-CDS-P-littoralis_Contig1355:17043..17269 | 1680789625.135929-CDS-P-littoralis_Contig1355:17043..17269 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 17044..17269 - |
| 1680789625.1457663-CDS-P-littoralis_Contig1355:18223..18313 | 1680789625.1457663-CDS-P-littoralis_Contig1355:18223..18313 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 18224..18313 - |
| 1680789625.1552653-CDS-P-littoralis_Contig1355:19579..19735 | 1680789625.1552653-CDS-P-littoralis_Contig1355:19579..19735 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 19580..19735 - |
| 1680789625.1897502-CDS-P-littoralis_Contig1355:19958..20048 | 1680789625.1897502-CDS-P-littoralis_Contig1355:19958..20048 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 19959..20048 - |
| 1680789625.1998935-CDS-P-littoralis_Contig1355:20789..20987 | 1680789625.1998935-CDS-P-littoralis_Contig1355:20789..20987 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 20790..20987 - |
| 1680789625.211585-CDS-P-littoralis_Contig1355:21314..21478 | 1680789625.211585-CDS-P-littoralis_Contig1355:21314..21478 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 21315..21478 - |
| 1680789625.2229533-CDS-P-littoralis_Contig1355:21905..22080 | 1680789625.2229533-CDS-P-littoralis_Contig1355:21905..22080 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 21906..22080 - |
| 1680789625.2336607-CDS-P-littoralis_Contig1355:22802..22962 | 1680789625.2336607-CDS-P-littoralis_Contig1355:22802..22962 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 22803..22962 - |
| 1680789625.244207-CDS-P-littoralis_Contig1355:23514..23639 | 1680789625.244207-CDS-P-littoralis_Contig1355:23514..23639 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 23515..23639 - |
| 1680789625.2685387-CDS-P-littoralis_Contig1355:24003..24066 | 1680789625.2685387-CDS-P-littoralis_Contig1355:24003..24066 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1355 24004..24066 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1355.5.2 >prot_P-littoralis_Contig1355.5.2 ID=prot_P-littoralis_Contig1355.5.2|Name=mRNA_P-littoralis_Contig1355.5.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=602bp
AILAREIAEEAQAHGWLLRLQMELSDALIGKEALERLPDAALNRLDSLRW EKQRADRMIESRRRVAELREGLVEEGRRRRQLYGERKWAAQSELRRVLAE RAAVGEKGGMLRLLLKVGDATLIARGSTLEAKMKEAAEDMEGIGTEGTVV PGEAFSAEREWVSEEFQEANAELKGWEEKLAEMVQVRVLTRRRETTVGEL VLGAARGALPPPHPDQWLPKADLQRHEDEVRLLLERHERELRAEQEAVEA SRVEVREAIRDAAILRAKLGAIEGWRDHEILVLRTAGRDAVDSLKDLLEK QRKESALRIDKLEQALSNLRKEYNEVRAELTARIERLNRGHSNTEAWVKA LRHDLAEERATRENAEERLAVQTGRAKVSGEKLRSELRAERMHSLRLELW IAAPHDEIRCLIKTQEEMRRLYALERVEHERRVREERHKVWRQHTAVRLL CTSVDSLFLFFAQRLANLAGSRRTHNDALRANGAVKVLAALCRGPRKDLR RLAARASGALGWNGRTEARVLAWDIHRHWNLWVQSCCPAEEARLRERGRT FEDPEEFRHADQISMPLSSSGPSYTPREEQARSTPTRSQLLSEEQGLVTT TQ back to topmRNA from alignment at P-littoralis_Contig1355:15375..24066- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1355.5.2 ID=mRNA_P-littoralis_Contig1355.5.2|Name=mRNA_P-littoralis_Contig1355.5.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8692bp|location=Sequence derived from alignment at P-littoralis_Contig1355:15375..24066- (Pylaiella littoralis U1_48) GCTATTTTGGCGAGGGAGATCGCTGAGGAAGCTCAGGCGCACGGCTGGCT
TCTACGTCTTCAGGTGGCCAGCCACCAGTCGTACCGGCATCATTGCTACT
GTCTAAGAGAGCCTTGAGTAGCTGCATATAGATGAAGAGGGCGGAGCACA
AATGGAGTACCATGGCATAGCAAATCGAAAATATTTCAGCAAGTAAATTT
CGAATGATGGGGGCAATCGGGTGTACAAAAGAGGCGTGCTTTTCTTCCGA
AATTGAAAAACAAAAAACGGGGTGAAAAATGCCCTTCATAGTGATTCTAC
GAACGTGCAGCGGGAAATCGTAAGCTTGCTCGTGTAAAGCGCGATTGATG
CCATCGCACTTAACGCTACGATACGTAGGAAACAACAACAACATCGACAA
TAACTTGCATTATATCACAAACAACAGATGGAGCTATCCGATGCCCTCAT
CGGCAAGGAGGCGCTGGAGCGGCTGCCGGACGCCGCGCTCAACCGGCTGG
ACTCGCTGCGGTGGGAGAAACAGCGTGCGGACAGGATGATCGAGTCCCGA
AGGCAAGCTGTGAGAGTAGTGATTGACTTCACTGTGCACTGTTGCGTAGT
AAGAGTGATGGTGATGCATTTGGAGCCTCTCAACAGAGAAGACTGGGAAT
CGAGTACTTGAAAAAATGTTGTTCGGGCGTATGACACAAACACACAAGAT
ACGCGACGCGAAGAGAAAAACGAAATAAATCAAAGTTATATACTGCTGTA
GGTGGTGTTGCGGCAGTATATACTCTCTCTGGGGGGTGTTGCACCATACA
TCGCGGTGGTTGAAAAATGTAGGTAGATAGGGGGTTTGTGTGGTTTCTGA
GATAAGTTTTAGAACAATGGTGGCGAGTTTTCGTCTTCTCCTGATCATTT
CGTTGAGCAAGAAAGCCCAAATTGGCTTTCGGTATGTATGGACAAAAACA
ACCTTACGCCAGCACTTACTGTATGTAGACCATCTACAGTTTGAGCCACA
CAATCACACCCGATCTGATCGCCCGACGCCCAAGCTATCGACGGATAGCA
CCGGACCCGAACCGAACCATTTGCCTTACCGCCATACCTGTCTGTCTGTG
CCAGGCGCGTTGCCGAGCTCCGAGAAGGCCTGGTGGAGGAGGGGAGGCGG
CGACGGCAGCTGTACGGCGAGAGGAAGTGGGCCGCACAGTCGGAGCTGAG
GAGGGTGCTGGCCGAGAGGGCGGCGGTCGGGGAGAAAGGGGGAATGCTGC
GTTTGCTTTTGAAGGTACTTTCTTTGGGCTTGTATTGTCTAGTTCTCGTA
GTAGTAGTGGTGGCGGTTTGGGGGGGGGGGTGGGCTGCTGCTGCTGCTGC
TGATGCTGCTGCTGTACATGCGCATATATCAATAGGAAGACTCGTCTTGG
TTGCTGGTTGGTTGAGTTGGATCACCCCTGCGGGAAATGTTTCAGCCACT
CAAAGTAATTGTTGTTGGTCTCTCCCTCTCCGGTGTGCGTGGTTTTGCCA
AAATAGTTAAGTTTATAGCTCCATCGAGCGCTAGACCCACACTTGTTGAT
TGGTTTCAGTATGGTAGACACATACATATCGAAAAAGCAGTGGAAAAAGA
CTTTGACAAAGCTTGCACACACTTTTCGGTGAAAGCCTACATGGCTTTTA
CGTTGGGTTTTGGAGGACCATGTAAACATACGCTTAGACGCCGCACTCAA
TTGTTTCTCACAAGGTTGTTTGTCTGGTAATATCGAGGCGATTACAGCAC
ACACAACGTTCTTTCAAGGGTGCAATCACCAAATTCAAAATATCCACGAT
TTATTTTACCCTGAATTCTTCTTCAAGATGATACAAGCTCCGGCGGCGGA
TAACGAAGACGCCCACCCCGCTTACTCAATACGGACCTTGCAGTTGAAAA
GGGGAAAAAGCGGATGGGTCATTCGAGCTGCTGTTCACAATCTTAGCAGC
ATGTATTTTTGTTCTAATTTTGCTTCGTACACACAGGTAGGAGACGCGAC
ACTTATCGCGCGAGGGTCCACCCTCGAGGCCAAGATGAAAGAGGCGGCCG
AGGATATGGAAGGGATTGGGACGGAGGGGACAGTGGTCCCCGGAGAGGCG
TTTTCTGCCGAGAGAGAATGGGTCAGCGAGGAGTTCCAGGAGGCGAACGC
AGAACTAAAAGGTCCGTGAAGTTTAAGTTTCCCTTCTTTGATGTTCTATA
CTTTGGTATCTTTTTTGTTGACACAAGGGAAAGTTCTGAATCTGATGCAA
TTTTCTACAGTCTTGTGTGCATGCATAGTTTGCACGATTTTTTTTTACTT
TTATTCCGGCCGAAGCTTGTACCACATAAACCCCCAGGTTCAAGGACCAT
AAAACACTCCCGTAAAAAACGTGATTGTACATGTTTTTAAATGCTGCCCC
CGCACCCCCCCCCCCCATCCCGCGCTCTCTCCGTACATACCAACATACCA
TACCCCCGACAACCCATTCCTGGTACTCGCTATTCATGCAACGACACACT
CTTCCTTTGACGGCGCCGCTGCTAGATCATCACGAACAAAACAACGCTAG
CCTTCATCGAAAACCACGGCTACAATATACCTTGACAGGCTGGGAAGAAA
AGCTGGCAGAGATGGTGCAAGTTAGAGTGCTGACTCGAAGGCGCGAGACC
ACAGTGGGCGAGCTCGTCCTAGGCGCTGCCAGGGGAGCGTTGCCCCCGCC
CCACCCAGACCAGTGGCTACCGAAGGCGGACCTGCAACGGCACGAGGATG
AGGTGGGTGGGTGGGTTGGGGGGACGATGAGTCACTTCAGCTCTCCATCA
GAACAAGTATATTGTTCTCGGCATGATTCAGGCGGTTTTTGATTGGTAGA
GACGCGCTCACACATAGACACAACGATACCATGTCGTGCCCTTTCGTATC
GAAACATAGCACTCAAAAGGTTAGGCGTGTGCTGCAGGGAAGCACGAACT
ACTGTGCTGCTCTGCGCCAGCTGAGTTATACGATTCACACCGGCCTGAAC
ATTTCGGACATACAAGCGTGGCCAAAGACTTGGTGAGTAGCAACCCGTCT
ACCTACCCTACCCCGAACAAACGACGAAGGTACGCCTCCTGCTTGAAAGG
CACGAGAGAGAGCTGCGCGCCGAGCAGGAGGCGGTGGAAGCTTCCCGCGT
GGAAGTTCGCGAGGCTATCCGAGACGCCGCCATCCTCAGGGCCAAGCTGG
GGGCGATCGAGGGCTGGAGGGACCACGAGATACTCGTGTTGAGGACTGCG
GGACGGGACGCTGTCGACAGTCTCAAGGTGAGTTTTCATCTAGCTACAGC
AGTTAGCGCATTGTGTATACCAAACACTGATACTTGTACGTACTCCAGAA
TGTACAAGACTATTTAGTAGCTCAAATTTGAAACATGCAAAGTACACTTA
TTATGCTATGAAGGTGATTGGGTCTGGAACAGACTCGATTTACGTACCAG
AAATTATCAACTTTTGTCATATTACAAGGCCCAAGGGTAACTCCGAAGAC
GCACGCGTGTCAAAACCTTTCGTTTTAAGGTATACGGATGGACAAAAAAA
CACAACGTAGACGAGTAGATTGTTAAAAAAAACTGAAAAACTCATATACA
GCGCGAGCTTGTGTGCGAAGTCTCGACGTCTCAAGGGTTATGCTTCTCAA
AATGGTTTTGTGTGTTGGGCGCTGGGTGTCCATGTGACGGCAATGAGTTT
GTCGTGCTTCGGGTTTGCCGGCAAAGGGTCTGGTATTCGACGAAAGTGTC
TTCATTTTCTGCACCTTAAGTTACTTTCTGCCTGCCGTCACGAACCTGCC
ATACGCTTGTCGTGTCTATCACGAGGGCGTTTCAGGACTACCTCAACTTG
GTGCTTCCGTATCATCCACAGGAAAGAAAAACTAAACTTCAGATCCTAAA
TACGTATTGCCATTTCCAAGCAATAGAGTCAACAATCACGGTCAATTTTG
CTTCTTCCTCCTTCTCCCCCCACTATTCTTGGTCGAAAACAAAACCGAAC
ACGCAAAAATAAATGCAGGACCTTCTGGAGAAGCAGAGGAAAGAGTCCGC
ACTTCGCATCGACAAGCTCGAGCAAGCCCTTTCAAATCTCCGCAAGGAGT
ACAACGAGGTACGATGGGGGGGGCGAGTTGCTACACAAAGACACATACAC
AATGATCGCACACCGAGGGTCCACCGATACGTGACCGCTGCTGCTTGTTC
CGTTCGATACAACGCATAGAAAAACAAAAGGGGCTCAAATATTGGTATTG
TAACAGTAAAACAAGCAGCAAATTATAACCCCCCCCCCCCCCTTGCGTGC
CCCCTTCTGCTGCGTGTTACCAACCACATAGGTTCGTGCTGAGCTGACCG
CCCGTATCGAGCGGCTAAATCGAGGGCATTCCAACACGGAGGCGTGGGTG
AAGGCTCTGCGGCACGATCTTGCTGAGGAGAGGGCTACGAGGGAGAACGC
CGAAGAACGGCTGGCGGTTCAAACCGGCCGCGCCAAGGTGTGTGCCTACA
AACCCAGTGAGTGTTGTTGTAGATGTTGTTGTTGTTGCTGCTGCTGTTGT
TAATTCTCAAGTTGGCTTGTCGCCAGATAAGTGTACTTGGATACGAGCAG
ATGCTTGGATGGATATGAGGTATGAGACCAGGCATATTATAATTTGCACC
TCAGGTAATCTCCCCAACACTTTAGGAATCAATCGAGAGCAAAGTAAGAA
GCGTTTCCTCGAACATGCCAACTGATTCATGGATTCGGTTTTGCAGATTG
TTGCGTGCACAGCAAGCGCCCATTATCTTCTGAATCGCCTGAGGTCGCCG
AAGAAGCTGGCTCAACTGTCAGATAGCCGACCACACTGTTTTCGGTCTTG
TCGATTCTCACATCAGCTCACCACCAAGAGTCAGCCCGTGGCCACAAAAC
CAGACGCAGAAAATTGATTCAAGACAGAAAAAAGTAAAATCGGAACTTGC
ACTGCACATGCAAGGGGGCACCGTACCGCCCAGGCGGGGGTATACAGCTC
CTATCTATCGTGACCCGAAACAGGCGCAAAGAAAAAAAAAGGCAAGTCAG
CAAAAAAAAAGAAAAAAAAACACTTTTGCGACGTGATACCGCCACACACG
TACGGTATAGAGGGCCCCCACCCCACACCCGATACCTGCGGTTGCACGCA
CGGCTACCACTAGAGGCGTCACAGAGTACAAACAGTATTTCAAGGCTACC
TCTTGCTCGTTCTTGATGTAACCGTCTTCTTGGGGTTGCACTATGTTCTT
TGTATCAAGTGACTTAGCATTTAGACTGTTCCGTATCAATACATGCGGCC
TTTTTCTGCTTGTTGTGCCATCATTCGCTGGAACGCCCCCAGACCCCCCC
CGCAATAAAGAAGAAAATAAGAAGGATTGCGATGGCCGTAAACGGTGGTG
GTAAAATGCTAAAAAGTTTCCGCGGACCTTGAAGCAACGAATTTACTGAC
ATCTCCCACGTTCTCTGTCCCGGTGTTTTTAGCGACGCAACAAAGCTGGA
ACAATACACAACAGTATGTGTAGCATAACAAAAGGTCCATGCGTATCGTC
TGTCTATGTCCGTGCCTTGTTCGGCAATCTATTGAAATAGTTGTAAACGG
GGGTTTTCAATCCGCGTTGCTTGTGTCGGGCTGGTGCGCCTGTCTGTCTG
TCTGTCTGTCTGTCCGCTTGCTGTTACTTGGTACTTGGTACTTCAAGAGT
ATAATCCGCTTACCTTTTCATGTATTCACACATTGATTTATTATAGCACC
CAGGTGTCGGGCGAGAAGCTGAGGTCAGAGCTGCGCGCGGAGAGGATGCA
CTCACTGAGACTGGAACTCTGGATTGCTGCCCCGCACGACGAGGTCAATA
CACAGCGCCGAAAAACTTGTGTTCGACCTTAAGTTTGTTTTCAAGTAAGC
TCCAGCGGGTGTGTGTGCTTATTAACTGTTCCTGACAGAAGCACGAGATT
ATTTACCGCTCGCAAGAAGCAGCGTTTACAGCGGAGTGCTCCTATGTTAC
GGGTGGCAACATCGACCAATCGGCGGGTGGGAGCACGCGTCATTGCGGGT
GTGTGTACGTTTGTTGTTGACGGTGGGGGAGACGATATCTCAGTTCGATG
AAGCAAACGCCTATAAAAACAAATGACCTACGTAGTGTTCGTAGGGAGAG
CAAAAAATATCTTCAAATAACCAAAAGCGTCGGCGCTTTTTATGTGTAGA
AACAACTTTTTTTCTGGGAGACGGTCGATTCCTACCTTGCCCTTTTCTGA
AAGTGTAGTCAACGCATACCGTAGAGAACGGCTTAAACGCCTCCGGTCGC
ATTCATCAAGACGCGTCGAACGTGACGACCCCCGTGGGGCAAATACCCGG
GTCATTGTAACTGTCAATCAAAGCATCCTTTCCCGGGTGATTCAAGAACA
TGTCGCTACCGTAGGTTACCTCATGGGTGAGGGATATCTCCATGCTCAAG
CTTGAAGCGCCCCGGGGTGTCTGTCATGGTCGGTGCGGGTCCGTTCTTTA
CAATTTGGTGCTGCTGTAGGCTGTTTTCTTGCGAATGAAATAACTTCGTA
GGTACCTCGATGAATCAACCTTGTGGTGGTGCGCGAGCACTACTGGGAGG
ATGGGTTGGCTCGCCTACATCGAAGTTGAGAAGGCATGGCGTGGGCAGGA
AGAAATGGGAGCACGCAATGCTCAACCCCACGCGCCCTGACCACCCCCTT
CTTTGCCCTTCCCGTGTGTATACATCAACCGGCGATATATCCCTAAGAAT
GATTAATATTTTATGCCGTTGAAAAATCAACAACATCGAAAAAATAGATT
CGGTGTCTCATCAAGACTCAAGAAGAAATGAGGCGGCTTTACGCGTTGGA
GAGGGTCGAGCACGAACGCAGGGTGCGCGAAGAGAGGCACAAGGTCTGGC
GCCAGCACACGGCTGTCCGACTCCTCTGCACGAGCGTAGACAGCTTGTTC
CTCTTCTTCGCGCAGCGCCTCGCCAACCTAGCCGGGTCTCGGCGGACCCA
CAACGACGCGTTGCGCGCGAACGGCGAGTACAACCTCCAGAAACAGTATC
AGTATCAGTAGCAGTAGCAGTAGCAGTAGGAGCAGCAGCAGCAGCAGCAG
CAGCAGTCGACCTGTGAGGGTGTCTTCTCTTGTCGGTCATCGGGGAGTCC
TTAGTGTACGTACGGTGCATTTCCTTCGCCTACGCTGGGTTTTGGTGCAG
TCACCGGCAATCATATCGTGGTTGGGGGGGAGCAATTAGTTGTTGCGACG
CGTTGAAGTGAAGGGGGGGTTGTCTCTCGCCGTCCATGATATTCTATGAT
AGACGTACACGTGGCTTTTCTCACGACGATGAACGAAGACTTCACGCACG
CATGGTTGTGCGATAATGCGCATTAAGGGATGGCGTTTTCACGGAATACA
GTGATGAGGAGCGCGGCCTCGCATGTTGCCGGATGACATCACCTCGATAT
CGGCCAGATAGATAGACGACTGCTTTGACAGTCGAAACCAAGTTACAAAT
ACTTTCGTTGCGGAATGTTATGCGTCCACCACCTGGTCTGTACTGCTTCC
TAGCAACTTATGTGCTAAACGCGCCCTCGACGGACCTGAGATTCCTTCCC
CAAGCAGCGTTCAAACCAATTTCTACAATGTTTGCCACCGCAACTCCCAT
TTCGCGTGACGGGTGGCCCTGAACAGGTGCGGTGAAGGTGTTGGCTGCTT
TATGTCGTGGCCCTCGCAAGGATCTCCGACGACTCGCGGCACGAGCGTCA
GGAGCACTAGGTTGGAATGGCCGAACCGAGGTATAACGCGAATGCTCCTT
AGTATAGACTTCAGGCACTGTAGTCCGGAAGAAGCGTGGACACAGACAGT
GTGCCTTCTCACCTCTAGAACCAAAGTTCCCTTTTTTGTGTAAAATGTTT
TGGAATTATGTTGAGTAGGATTTGCATGTTTGGGGATACGAACGGCCTTT
TTTTCAAGCAGGCACGACGTTGCTGGGTGTCAAGTCAGCAAGCACGCCAT
ACCCGCAGGTTTGCAGTTGGTCATAAACACGGCGTTGCCATATAGGGTCT
CTGCGTAGACATAAAGTAGTTTATTCCCGGGGCTGTTCCTCTCCAATATA
CCTGTGAACGCAGAAACGGTGAGCGCGCGTACTAGCCTCGCGAGATGGGG
CACAGCTCAGTAGATTGTAAAAATGTAAAAAAATGGATAGGTCAAGACAT
CGGAACTTAAAAAAACGGAGCGTGATATTGAAACCTCTACGTGTAGGGTC
ACGATATATTCACTACCCCGTCCCACCGAAGACGAAACGATTTGTGGCAT
TCCTCGCACCAAAGAAACGTCTAAACTCTTGAGCTTGTTCAACGAAAACA
AGCACAAACGAATCATCGAGAGATGGATCATTGACAAGTATCAGTCTCAT
TTGCTCTTTTCACCAAACAAATAAAAAAAATAAACAGGCGCGGGTGCTGG
CTTGGGACATTCATCGTCACTGGAATCTCTGGGTGCAGTCGTGCTGCCCC
GCTGAGGAGGCGCGGCTGCGAGAGAGGGGACGGACCTTCGAAGATCCCGA
AGAATTCAGGCATGCCGATCAGATATCTATGCCCCTGTCTTCTTCTGGTC
CTTCTTATACCCCGCGAGAAGAACAAGCCAGAAGCACCCCCACCAGAAGT
CAACTCCTCTCTGAAGAGCAAGGCCTGGTGACGACAACGCAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1355:15375..24066- >mRNA_P-littoralis_Contig1355.5.2 ID=mRNA_P-littoralis_Contig1355.5.2|Name=mRNA_P-littoralis_Contig1355.5.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1806bp|location=Sequence derived from alignment at P-littoralis_Contig1355:15375..24066- (Pylaiella littoralis U1_48) GCTATTTTGGCGAGGGAGATCGCTGAGGAAGCTCAGGCGCACGGCTGGCT TCTACGTCTTCAGATGGAGCTATCCGATGCCCTCATCGGCAAGGAGGCGC TGGAGCGGCTGCCGGACGCCGCGCTCAACCGGCTGGACTCGCTGCGGTGG GAGAAACAGCGTGCGGACAGGATGATCGAGTCCCGAAGGCGCGTTGCCGA GCTCCGAGAAGGCCTGGTGGAGGAGGGGAGGCGGCGACGGCAGCTGTACG GCGAGAGGAAGTGGGCCGCACAGTCGGAGCTGAGGAGGGTGCTGGCCGAG AGGGCGGCGGTCGGGGAGAAAGGGGGAATGCTGCGTTTGCTTTTGAAGGT AGGAGACGCGACACTTATCGCGCGAGGGTCCACCCTCGAGGCCAAGATGA AAGAGGCGGCCGAGGATATGGAAGGGATTGGGACGGAGGGGACAGTGGTC CCCGGAGAGGCGTTTTCTGCCGAGAGAGAATGGGTCAGCGAGGAGTTCCA GGAGGCGAACGCAGAACTAAAAGGCTGGGAAGAAAAGCTGGCAGAGATGG TGCAAGTTAGAGTGCTGACTCGAAGGCGCGAGACCACAGTGGGCGAGCTC GTCCTAGGCGCTGCCAGGGGAGCGTTGCCCCCGCCCCACCCAGACCAGTG GCTACCGAAGGCGGACCTGCAACGGCACGAGGATGAGGTACGCCTCCTGC TTGAAAGGCACGAGAGAGAGCTGCGCGCCGAGCAGGAGGCGGTGGAAGCT TCCCGCGTGGAAGTTCGCGAGGCTATCCGAGACGCCGCCATCCTCAGGGC CAAGCTGGGGGCGATCGAGGGCTGGAGGGACCACGAGATACTCGTGTTGA GGACTGCGGGACGGGACGCTGTCGACAGTCTCAAGGACCTTCTGGAGAAG CAGAGGAAAGAGTCCGCACTTCGCATCGACAAGCTCGAGCAAGCCCTTTC AAATCTCCGCAAGGAGTACAACGAGGTTCGTGCTGAGCTGACCGCCCGTA TCGAGCGGCTAAATCGAGGGCATTCCAACACGGAGGCGTGGGTGAAGGCT CTGCGGCACGATCTTGCTGAGGAGAGGGCTACGAGGGAGAACGCCGAAGA ACGGCTGGCGGTTCAAACCGGCCGCGCCAAGGTGTCGGGCGAGAAGCTGA GGTCAGAGCTGCGCGCGGAGAGGATGCACTCACTGAGACTGGAACTCTGG ATTGCTGCCCCGCACGACGAGATTCGGTGTCTCATCAAGACTCAAGAAGA AATGAGGCGGCTTTACGCGTTGGAGAGGGTCGAGCACGAACGCAGGGTGC GCGAAGAGAGGCACAAGGTCTGGCGCCAGCACACGGCTGTCCGACTCCTC TGCACGAGCGTAGACAGCTTGTTCCTCTTCTTCGCGCAGCGCCTCGCCAA CCTAGCCGGGTCTCGGCGGACCCACAACGACGCGTTGCGCGCGAACGGTG CGGTGAAGGTGTTGGCTGCTTTATGTCGTGGCCCTCGCAAGGATCTCCGA CGACTCGCGGCACGAGCGTCAGGAGCACTAGGTTGGAATGGCCGAACCGA GGCGCGGGTGCTGGCTTGGGACATTCATCGTCACTGGAATCTCTGGGTGC AGTCGTGCTGCCCCGCTGAGGAGGCGCGGCTGCGAGAGAGGGGACGGACC TTCGAAGATCCCGAAGAATTCAGGCATGCCGATCAGATATCTATGCCCCT GTCTTCTTCTGGTCCTTCTTATACCCCGCGAGAAGAACAAGCCAGAAGCA CCCCCACCAGAAGTCAACTCCTCTCTGAAGAGCAAGGCCTGGTGACGACA ACGCAG back to top
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