mRNA_P-littoralis_Contig1355.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: A0A6H5KXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK7_9PHAE) HSP 1 Score: 322 bits (826), Expect = 2.770e-99 Identity = 180/314 (57.32%), Postives = 229/314 (72.93%), Query Frame = 1
Query: 1171 APLLFDEKSGQRRNIRSYAGDEDGGEN-SPRQQRRLGNAAEGGSTPLCGPGGLLSPWRVRILLLLQCFVLMVEVGFYMTYPLWLLASREHGGLQWSVPKVGKVLGWSGVGSALFQFVAYPFMVRTIGIIRLLRCSGVFCAVLFLFIPDVQRLKWSEQASYVVGVLTIVLVLSCASVAETAVNLASANAVPVKMRGKVGGVFAVAAAVGKVIGPAALSSLLAWSLNVAPGRGRSINVLVDYHALFVVLMVLMVVVIMLGLKALTLESLTVPVEDRHGEEYLSVSQSIS-----SSDSFAEATITDSRVDNGQRRR 2094
+PLL +K G RRNI +Y+ +E+ G++ SPR R G+ A G + LCGPGGLL+P RVR+L+L+QC V +++ GF YPLWLLAS++ GGL+W VPK+GKVLGWSGVG LFQF YP + +TIGI+ LLR SG+ A F+F+PD+QR WSE SYVVGV ++ + SC SV ETA+NLASANAVPV MRGK+GG+FAVA++ G+VIGPA L +LLAWSL +S NVL+DYHA+FVV MVLM V+ +LG LTLE+LT+PVEDR G EY S+S S + SS A T+ S+VDN RRR
Sbjct: 59 SPLL--DKKGHRRNISNYSAEEECGDDASPRHLRWSGSTARDGESSLCGPGGLLTPRRVRLLVLMQCLVSIMDAGFVQMYPLWLLASKDSGGLEWPVPKIGKVLGWSGVGQLLFQFFVYPALCKTIGIVWLLRGSGLLAAAGFIFVPDIQRANWSENGSYVVGVAIVIFIGSCISVVETAMNLASANAVPVPMRGKMGGIFAVASSFGRVIGPAGLCTLLAWSL-------QSSNVLMDYHAVFVVEMVLMSVMFVLGRNVLTLEALTIPVEDRRGAEYESISVSSTDITNTSSQVLAGDTMVTSKVDNRPRRR 363
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: D8LP15_ECTSI (Transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP15_ECTSI) HSP 1 Score: 270 bits (689), Expect = 6.080e-81 Identity = 147/250 (58.80%), Postives = 182/250 (72.80%), Query Frame = 1
Query: 1360 LQCFVLMVEVGFYMTYPLWLLASREHGGLQWSVPKVGKVLGWSGVGSALFQFVAYPFMVRTIGIIRLLRCSGVFCAVLFLFIPDVQRLKWSEQASYVVGVLTIVLVLSCASVAETAVNLASANAVPVKMRGKVGGVFAVAAAVGKVIGPAALSSLLAWSLNVAPGRGRSINVLVDYHALFVVLMVLMVVVIMLGLKALTLESLTVPVEDRHGEEYLSVSQSIS-----SSDSFAEATITDSRVDNGQRRR 2094
+QC V M++ GF YPLWLLAS++ GGL+W VPK+GKVLGWSGVG LFQF YP + +TIGI+ LLR SGV A F+F+PD+QR WSE S VVG ++ + SC SV ETA+NLASANAVPV MRGK+GG+FAVA++ G+VIGPA L +LLAWSL +S NVL+DYHA+FV+ MVLM V+ +LG K LTLE+LT+P+EDRHG EY SVS S + SS T+ S+VDN RRR
Sbjct: 1 MQCLVSMMDAGFVQMYPLWLLASKDSGGLEWPVPKIGKVLGWSGVGQLLFQFFVYPALCKTIGIVWLLRGSGVLAAASFIFVPDIQRANWSENWSCVVGAAIVIFLGSCISVVETAMNLASANAVPVPMRGKIGGIFAVASSFGRVIGPAGLCTLLAWSL-------QSSNVLLDYHAVFVIEMVLMSVMFVLGRKVLTLEALTIPIEDRHGAEYESVSVSSADITNTSSQILPGDTMATSKVDNRPRRR 243
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 255 bits (652), Expect = 1.360e-71 Identity = 185/590 (31.36%), Postives = 298/590 (50.51%), Query Frame = 1
Query: 262 LLVHTVAVTSLTTYMGVYVQQLLGLATLDMAGYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPKHAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPETLTTERSGGRGD--RSTAKDRCAVVDSSIGRSSRVAEDGTVSSEYGSNGGIMLVDSQATVDSPPKYAYSSRNL-----------CNLSRSPSGRTAPTSAN-PRSNISGSGNGHERDLGKTTSSKDPAPLLFDEKSGQRRNIRSYAGDEDGGENSPRQQRRLGNAAEGGSTPLCGPGGLLSPWRVRILLLLQCFVLMVEVGFYMTYPLWLLASREHGGLQWSVPKVGKVLGWSGVGSALFQFVAYPFMVRTIGIIRLLRCSGVFCAVLFLFIPDVQRLKWSEQASYVVGVLTIVLVLSCASVAETAVNLASANAVPVKMRGKVGGVFAVAAAVGKVIGPAALSSLLAWSLNVAPGRGRSINVLVDYHALFVVLMVLMVVVIMLGLKALTLESLTVPVEDR 1989
+ ++ A+ +L Y+G V+ LL L T++ G+YA ++ S+F G LS Y WG D GRKPV+IIG+ + ++++ FG+SE+ + A+ +RF G+ N I P R E+ GP+H V+G+ ++ G+RAI ++G IGG LAQPAL +P+ FS TGLF +PFLLPNLV A+L+ L +V+F +PET + D R+ + D +S GRSSR GS+ ++S +SP + ++ R G AP + + ++G + KTT + DE S + GDE+ G L GPGGLL+ V+++L L C + + +GF YPL+ L++ GGL W+ ++G+V+ +G+ A+ Q V +P ++ +GI R FL +P + + W + + + V+ L++ A++L S VP +MRGK+GG++ A ++G+ GP ++ AWS V+P + VDYH +F + +VVV ++ + LT+ESL DR
Sbjct: 1 MTLNMYALVNLFPYVGTLVKTLLKLETMNEVGFYAGYVASSFTFGRFLSGYVWGSATDIIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPETKDYNKRRFSRDSVRTASTDPRRSPSASPGRSSR--------KNCGSS--TSAINSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRREKGEGAPLYQHLSQEPLAGDASFPASAAEKTTDGSKSSTCATDELSA------AEQGDEEQG--------------------LFGPGGLLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWS--VSPSTLEAFGGWVDYHLVFCASALALVVVGVMAWRTLTVESLMSEELDR 552
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 232 bits (591), Expect = 4.110e-62 Identity = 190/606 (31.35%), Postives = 287/606 (47.36%), Query Frame = 1
Query: 226 FPWAPLMAVSSCLLVHTVAVTSLTTYMGVYVQQLLGLATLDMAGYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPKHAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPETLTTERSGGRGDRSTAKDRCAVVDSSIGRSSRVA--EDG-------------TVSSEYGSNG--GIMLVDSQATVDSPPKY-----AYSSRNLCNLSRSPSGRTAPTSANPRSNISGSGNGHERDLGKTTSSKDPAPLLFDEKSGQRRNIRSYAGDEDGGENSPRQQRRLGNAAEGGSTPLCGPGG----------------LLSPWRVRILLLLQCFVLMVEVGFYMTYPLWLLASREHGGLQWSVPKVGKVLGWSGVGSALFQFVAYPFMVRTIGIIRLLRCSGVFCAVLFLFIPDVQRLKWSEQASYVVGVLTIVLVLSCASVAETAVNLASANAVPVKMRGKVGGVFAVAAAVGKVIGPAALSSLLAWSLNVAPGRGRSINVLVDYHALFVVLMVLMVVV 1929
FPW P++A++ L+ H+ A+TSL Y+G VQ L D AGYYA ++ SAFM+G + SSY WG FAD GR PV+ G+ + V +I FGLS S AL RF G+ N + +++ M E+ G +H G+ ++ G +IG ++GP +GG LA+PA +P+ FS +GLFGR P+LLPN+V A +A LP V F + ET + RGD S +V ++ + A E+G T+ S+ +G I+L D +A +Y S C GR + + R +S SG D +D A F G++ N + + R +RL A G + G G LL+ R R ++ + V +G YPLW L++ GGL WS ++G+ L G+ FQ + YP + + IG R R + +FL P + L+ +E+ ++ + L + A+ V LA+ NAV RG + G+ ++ K GP SS+ AWS++ GR R + DYH F +L + MV+V
Sbjct: 26 FPWLPMLAIAIGLVSHSYALTSLFPYVGYMVQHLGVTDDKDEAGYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLGCASIGLVIGPGLGGLLAEPATHYPTVFSQSGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNN--RGDSSGEFKLLSVSEAGTVETHEAATVEEGGMVEMTPTARTQNTLESDTNGSGRDNILLADRRAEGSRAVRYDGGIEGRSGTADCYDIDEDHGRNSGEQS--RQLLSASGRSSNDDYVDDGDERDEA-AAFGAGGGRKSNRERFR-------TTTRALQRLEKAKGFGDSDSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALFSFVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSID---GRRRPFPL--DYHLAFYLLALGMVLV 614
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.230e-52 Identity = 152/500 (30.40%), Postives = 228/500 (45.60%), Query Frame = 1
Query: 355 GYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPK-HAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPETLTTERSGGRGDRSTAKDRCAVVDSSIGRSSRVAEDGTVSSEYGSNGGIMLVDSQATVDSPP---KYAYSSRNLCNLSRSPSGRTAPTSANPRSNISGSGNGHERDLGKTTSSKDPAPLLFDEKSGQRRNIRSYAGDEDGGENSPRQQRRLGNAAEGGSTPLCGPGGLLSPWRVRILLLLQCFVLMVEVGFYMTYPLWLLASREHGGLQWSVPKVGKVLGWSGVGSALFQFVAYPFMVRTIGIIRLLRCSGVFCAVLFLFIPDVQRLKWSEQASYVVGVLTIVLVLSCASVAETAVNLASANAVPVKMRGKVGGVFAVAAAVGKVIGPAALSSLLAWSLN 1842
G+YA ++ AF +G LS Y WG +D GR+PV+++G+ AT V ++TFGLS + A++SRF GI N I P R E+ G H V + ++ G+RA + G +GG L QP +PS FS+TGLFGR PFLLPNLV +A + LP V+ VPET E++ R + +A PP K AY S ++S A A ++ SG A ++GG ++ R+ N E G LCGPGGLLS RV+ LL L C V + GF +PLW L++ GGL W ++GKVL SG + Q +P +++ +G + +R + FL P+ + W+ + V ++ + C + A+ +AS + VP ++RGK+ G++ A + G+ L AWS++
Sbjct: 7 GFYAGYVAGAFTLGRFLSGYLWGYVSDSVGRRPVILVGLSATAVLSLTFGLSTTYEVAISSRFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKDFEKTRSRSXXXXXXXXXXXXXXXXXXXXXXSP----------------ARHRAVARHPPQGGKLAYRSLEDGDVS-------AQQEAQETRGVNDSG--------------------------------GRAKHKEGGLHA-REPPVTSNREEQG---LCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSIS 447
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: A0A835Z5M2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M2_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.250e-44 Identity = 173/581 (29.78%), Postives = 252/581 (43.37%), Query Frame = 1
Query: 355 GYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPKHAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPETLTTERSGGRGDRSTAKDRCAVVDSSIGRS-----SRVA--EDGTVSSEYGSNGGIMLVDSQATVDSPPKYAYSSRNLCNLSRSPSGRTAPTSANPRSNISGSG----------------------NGHERDLGKTTSSKDP----------------APLLFDEKSGQRRNIR-----SYAGDEDGGENSPRQQRRLGNAAEGGSTPLCGPGGLLSPWRVRILLLLQCFVLMVEVGFYMTYPLWLLASREHGGLQWSVPKVGKVLGWSGVGSALFQFVAYPFMVRTIGIIRLLRCSGVFCAVLFLFIP------DVQRLKWSEQASYVVGVLTIVLVLSCASVAETAVNLASANAVPVKMRGKVGGVFAVAAAVGKVIGPAALSSLLAWSLNVAPGRGRSINVLVDYHALFVVLMVLMVVV 1929
GYYA ++ AFM+G SSY WG F+D++GRKP L+IG + V+++ FGLS L A+ R G N ++ E+ G H V G+ ++ G +I ++GP +GG LA P +P F G F R P+LLPN + ++ ++L V F+VPET G RST A SS G++ RVA E G GSN I D A P K+ L R G + +SA S +G +R+ G A F Q ++R GD + GE Q+ G+ GG+ G LLS R +L++ + ++ + F TYPLW L++++ GGL W +G+VL +GV ALFQF+ YP + R +G +R+L+ V L+ P D L W VG +++ T++ L N+V RG + G+ A + K IGP ++L A+S+ G LVDYH FVV VL + V
Sbjct: 4 GYYAGFIAGAFMLGRFASSYPWGRFSDKYGRKPALLIGAASVCVFSLGFGLSTELWVAVLMRLLLGALNGTVSTCKVCVSEICGKAHEVKGMGYITGCWSISFVIGPALGGLLADPCNQYPGVFPRGGAFERFPYLLPNALASIFGVLSLVTVWFMVPET--------SGPRSTLLPSAAPAGSS-GKNLKYKFQRVATTEGGVAGGGGGSNFTIEDADDDALSALPAKHP-----AVELPRYHGGSSGGSSAQHSLRSVASTXXXXXXXXXXXXXXXXHDGRRLDGMQRNGGSXXXXXXXXXXXXXXXXXXRNGAGAMAPFGRHLSQHGSVRHALLDGSEGDLEKGEGRG-QKGDGGDVGGGGAGHRSGVLALLSVAPARRVLVVYMVLSLLVIMFDETYPLWALSTQQVGGLDWQPGTIGQVLSMAGVFMALFQFLVYPHVARALGYVRMLKVVSVVVIPLYALFPMCSLLRDRPALLWPAMVCIKVG----------SNMIFTSIFLIVNNSVEGDQRGGLNGLAMTAGSAAKAIGPPLGATLFAYSI-----AGAHSLPLVDYHLTFVVCAVLSIAV 554
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: D8LET2_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET2_ECTSI) HSP 1 Score: 166 bits (420), Expect = 9.240e-42 Identity = 134/393 (34.10%), Postives = 193/393 (49.11%), Query Frame = 1
Query: 211 GASSGFPWAPLMAVSSCLLVHTVAVTSLTTYMGVYVQQLLGLATLDMAGYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPK-HAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPETLTTERSGGRGDRSTAKDRCAVVDSSIGRSSRVAEDGTVSSEYGSNGGIMLVDSQATVDSPPK---YAYSSRNLCNLSRSPSGRTAPTSANPRS-NISGSGNGHERDLGKTTSSKDPAPLLFDEKSGQRRNIRSYAGDEDGGENSPRQQRRLGNAAEGGSTPLCGPGGLLSPWRVRILLLLQCFV 1374
G S FP ++ ++ C +VH+ SL Y+G ++LL L + + +G+YA ++ SA+M+G LS Y WG +D GRKPV+++G+ A V ++TFGLS + A++SRF G+ N I P R E+ H V + ++ G++A+ + G +GG L QP +P+ FS TGLFGR PFLLPNLV LA + LP+V+ VPET E + R S+ A S + S A D T+ V PPK AY+S ++S + PRS N SGS H ++ G T ++P PL+ R+++RL CGPGGLLS RV+ LL L C V
Sbjct: 13 GNVSTFPIRTIVVLALCAVVHSYTSISLFPYVGTMAKELLDLESTNTSGFYAGYVASAYMLGHFLSGYLWGYASDSVGRKPVILVGLLAVAVLSLTFGLSTTYELAISSRFVLGVMNGIMPAIRTTVYEVCTTNSHVVQAMAYIDGAKAVTIVFGSAMGGLLVQPVDHYPNVFSGTGLFGRFPFLLPNLVGVGLALLILPIVIACVPETKDFEDTCSRSRFSSVSSGEAT--SGLSAESSPARDRTI------------------VRRPPKGGALAYTSLGDEDVS------AQQAAQEPRSVNDSGSRAAH-KEGGLDT--REP-PLI-----------------------RKREEQRL-----------CGPGGLLSVPRVKPLLFLVCVV 341
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.750e-40 Identity = 90/216 (41.67%), Postives = 134/216 (62.04%), Query Frame = 1
Query: 199 IDDRGASSGFPWAPLMAVSSCLLVHTVAVTSLTTYMGVYVQQLLGLATLDMAGYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPKHAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPETLTTE 846
+D RG + FPW P++A++ L+ H+ + +SL Y+G VQ L D AGYYA L SAFM+G +S ADR+GR PV+ IG+ + GV ++ FGLS + AL RF G N++ +++ M E+ G +H +G+ ++ G + G ++GP GG LAQPA +P+ FS +GLFGR+P+LLPN+V A +A LP+V F + ETL +
Sbjct: 64 LDARGMETPFPWLPMLALAIGLVSHSYSFSSLFPYVGYMVQHLGVTDDRDEAGYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMGYVTGCSSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETLNLD 279
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: D8LP14_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP14_ECTSI) HSP 1 Score: 150 bits (379), Expect = 3.470e-39 Identity = 71/102 (69.61%), Postives = 92/102 (90.20%), Query Frame = 1
Query: 241 LMAVSSCLLVHTVAVTSLTTYMGVYVQQLLGLATLDMAGYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFF 546
++A+SSCLL TVAVTSL+TY+GVYVQQL+GLA+ DMAGYY+SWLL ++ +G LLSSY WGIFADRFGRKPV++IGVC TG+++I FG+SE+LA+A+ SR+F
Sbjct: 1 MVAISSCLLAQTVAVTSLSTYIGVYVQQLVGLASADMAGYYSSWLLISYTVGGLLSSYPWGIFADRFGRKPVMLIGVCGTGLFSIAFGMSETLAAAMISRYF 102
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 159 bits (402), Expect = 7.810e-38 Identity = 84/203 (41.38%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 226 FPWAPLMAVSSCLLVHTVAVTSLTTYMGVYVQQLLGLATLDMAGYYASWLLSAFMIGTLLSSYAWGIFADRFGRKPVLIIGVCATGVYAITFGLSESLASALASRFFFGIANSIFPMARIMAVELLGPKHAVIGIVFLPGSRAIGAIVGPTIGGQLAQPALFHPSHFSSTGLFGRHPFLLPNLVVALLAAVTLPVVLFLVPET 834
FPW P++A++ L+ H+ +++SL Y+G VQ L D AGYYA +L SAFM+G ADR+GR PV+ IG+ + GV ++ FGLS + AL RF G N + +++ M E+ G +H +G+ ++ G + G ++GP GG LAQPA +P+ FS +GL+GR+P+LLPN+V A +A LP+V F + ET
Sbjct: 37 FPWLPMLALAIGLVSHSYSLSSLFPYVGYMVQHLGVTDDKDEAGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVTGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLYGRYPYLLPNVVGASIAFSGLPMVFFFLKET 239 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1355.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1355.1.1 >prot_P-littoralis_Contig1355.1.1 ID=prot_P-littoralis_Contig1355.1.1|Name=mRNA_P-littoralis_Contig1355.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=643bp MELQIIDDRGASSGFPWAPLMAVSSCLLVHTVAVTSLTTYMGVYVQQLLGback to top mRNA from alignment at P-littoralis_Contig1355:351..9768+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1355.1.1 ID=mRNA_P-littoralis_Contig1355.1.1|Name=mRNA_P-littoralis_Contig1355.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9418bp|location=Sequence derived from alignment at P-littoralis_Contig1355:351..9768+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1355:351..9768+ >mRNA_P-littoralis_Contig1355.1.1 ID=mRNA_P-littoralis_Contig1355.1.1|Name=mRNA_P-littoralis_Contig1355.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1929bp|location=Sequence derived from alignment at P-littoralis_Contig1355:351..9768+ (Pylaiella littoralis U1_48)back to top |