prot_P-littoralis_Contig1354.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1354.1.1
Unique Nameprot_P-littoralis_Contig1354.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length90
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1354.1.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 2.680e-20
Identity = 47/90 (52.22%), Postives = 50/90 (55.56%), Query Frame = 0 
Query:    1 HARSEEEWPEQYKYHYPKIFDGSAGPCKFLIRETRDRDRERKRWLKLSRDEKVTGNKRQASQKVYRDKCFPIDGTDVGERPCVIFECDET 90
            HAR+EE+WP QYKYHYPKIFDGSAGPCK                                   VYRDKCFPI GTDVGER CV FEC +T
Sbjct:  178 HARTEEKWPGQYKYHYPKIFDGSAGPCK-----------------------------------VYRDKCFPIGGTDVGERDCVNFECGDT 232
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1354.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKD9_9PHAE2.680e-2052.22ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1354contigP-littoralis_Contig1354:1260..2418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1354.1.1mRNA_P-littoralis_Contig1354.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1354 1260..2418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1354.1.1 ID=prot_P-littoralis_Contig1354.1.1|Name=mRNA_P-littoralis_Contig1354.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp
HARSEEEWPEQYKYHYPKIFDGSAGPCKFLIRETRDRDRERKRWLKLSRD
EKVTGNKRQASQKVYRDKCFPIDGTDVGERPCVIFECDET
back to top