mRNA_P-littoralis_Contig1350.9.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1350.9.2
Unique NamemRNA_P-littoralis_Contig1350.9.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: D8LK09_ECTSI (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK09_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.940e-40
Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 1
Query:  874 QKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNKRMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            +K  +K   I K +KD+   K+K  L +A YR  ARAK L  D H+KTIK L+D YDVI++GKI VQ LMS   Q+ +NK  F +LSH+ FRQRL  K  ++   VV QDESYT+Q C +CG LKKD+G AE Y C  C L + RD++   NI++R
Sbjct:    2 EKLRTKSYGILKAIKDSKDDKKKNNLGRACYRVNARAKDLVTDFHFKTIKFLMDNYDVIILGKINVQQLMSMKSQNKTNKDHFRFLSHFLFRQRLLMKTSITPHAVVIQDESYTTQTCVKCGVLKKDVGDAEVYKCSRCNLCMGRDISGASNILLR 157          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A139X085_9CYAN (Transposase n=1 Tax=Scytonema hofmannii PCC 7110 TaxID=128403 RepID=A0A139X085_9CYAN)

HSP 1 Score: 135 bits (340), Expect = 3.990e-31
Identity = 123/420 (29.29%), Postives = 201/420 (47.86%), Query Frame = 1
Query:   94 SWFKTKTYTLPNKSSQNISWPSSMCSPTSCTEAEEGTKIKARRIRLKPREEQEKVLREWMKSARQTYNEALHLVKAKNAKPNLLLNKLVVTSRETDKNSRLERMKSTPADVRKSATRDRVKNFKSARAAYK--ARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            SWF TK YT  N++S  I   S   +   CT++E  T  K+R+I L+    Q+ ++ +W   +R  +N+ + L+K    K N    K  + S   D        K TP  ++  A +D  K   +A++ YK    + +   V F+SR+    S  + K ++S K    +  G      EV   E   +  G       CR+   +G +Y+ IP    V+   + T  + RV+ +DPG+RT FT  S S     LG +   + QK   K   +   +   T  + K +L+KA  R + + K+L  +L  K+I+ L+D +D+I++       +  K  +   +K  R    LSHY F+Q +K+KA   NKVV++ +E+YTS+     G + K+LG A+       G  +DRD+N    I +R
Sbjct:  122 SWFLTKLYTARNQNSPKIYSQSFTYAVAECTDSE-STPRKSRKIYLRLTHVQKILINQWFGVSRFVFNQTIELLKDGVVKANWKAIKGGILSGLPDW------CKDTPYQIKSIAIKDACKAVSNAKSKYKNGGGISR---VNFRSRKDPKQSCYIPKSAVSEKGIYHTILG------EVCYREFLPKNFG------DCRLVLAYGDYYLTIP----VESPQLETENQGRVVALDPGIRTFFTFLSESSFGW-LGKNANVKIQKLCFKLDELCSGI-SKTRGQLKRRLKKAANRLRGKIKNLVDELQKKSIRFLVDNFDIILLPTFETSQMSKKARRRIRSKSVRQMLTLSHYKFKQFIKHKAFEHNKVVLDVNEAYTSKTVSWSGEIVKNLGGAKIIKSSSTGQTMDRDLNGARGIFLR 513          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A2G4EXR4_9CYAN (Transposase n=2 Tax=Tychonema bourrellyi TaxID=54313 RepID=A0A2G4EXR4_9CYAN)

HSP 1 Score: 125 bits (313), Expect = 2.190e-28
Identity = 108/376 (28.72%), Postives = 187/376 (49.73%), Query Frame = 1
Query:  220 RIRLKPREEQEKVLREWMKSARQTYNEALHLVKAKNAKPNLLLNKLVVTSRETDKNSRLERMKSTPADVRKSATRDRVKNFKSARAAYKARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            R+ L P  EQ+ ++++W   +R  YN  +  ++ + AK N +  K  +       NS  E  K  P  ++  A +D     K+A+  +K   Q   + KF+SR+ T  SI + K ++       S  G  +    + T+  FS+           R+   +G +Y+++ ++V+  K    T  + RV+ +DPG+RT  T  S       LG D+    QK   +   +  K+  A  S++K + +KA  R + + K+L+ +LH K  K L+D +DVI++       ++SK+ +   NK  R    LSHY F+  LK+KA  ++++V++ +E+YTS+     G + K+LG A T      GL +DRD+N    I +R
Sbjct:    2 RLFLNP--EQKALIKQWFGVSRFVYNTTIKYLQERGAKANWMTIKTGIL------NSLPEWAKPVPFQIKSIAIKDACSAVKAAKQGFKKDGQLR-QCKFRSRKDTKQSIYVPKSAVKNCGVYHSILGKCQLTESLPTN--FSDG----------RLTLTYGEYYLIVSEEVQPTK----TDKQGRVVALDPGVRTFMTFFSEDSYGW-LGNDSNLYIQKLCFRLDKLVSKISKAP-SRQKRRFKKAASRLRCKIKNLSRELHHKVAKFLVDNFDVILLPTFETSQMVSKSRRKLRNKTVRQMLTLSHYEFKNFLKWKAWENSQLVIDCNEAYTSKTVSWTGEIVKNLGGARTIKSAATGLKMDRDLNGARGIFLR 350          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: UPI0011DFF219 (RNA-guided endonuclease TnpB family protein n=1 Tax=Scytonema hofmannii TaxID=34078 RepID=UPI0011DFF219)

HSP 1 Score: 121 bits (303), Expect = 7.970e-27
Identity = 112/391 (28.64%), Postives = 187/391 (47.83%), Query Frame = 1
Query:  181 CTEAEEGTKIKARRIRLKPREEQEKVLREWMKSARQTYNEALHLVKAKNAKPNLLLNKLVVTSRETDKNSRLERMKSTPADVRKSATRDRVKNFKSARAAYK--ARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            CT++E  T  K+R+I L+    Q+ ++ +W   +R  +N+ + L+K    K N    K  + S   D        K TP  ++  A +D  K   +A++ YK    + +   V F+SR+    S  + K ++S K    +  G      EV   E   +  G       CR+   +G +Y+ IP    V+   + T  + RV+ +DPG+RT FT  S S     LG +   + QK   K   +   +   T  + K +L+KA  R + + K+L  +L  K+I+ L+D +D+I++       +  K  +   +K  R    LSHY F+Q +K+KA   NKVV++ +E+YTS+     G + K+LG A+       G  +DRD+N    I +R
Sbjct:   13 CTDSE-STPRKSRKIYLRLTHVQKILINQWFGVSRFVFNQTIELLKDGVVKANWKAIKGGILSGLPDW------CKDTPYQIKSIAIKDACKAVSNAKSKYKNGGGISR---VNFRSRKDPKQSCYIPKSAVSEKGIYHTILG------EVCYREFLPKNFG------DCRLVLAYGDYYLTIP----VESPQLETENQGRVVALDPGIRTFFTFLSESSFGW-LGKNANVKIQKLCFKLDELCSGI-SKTRGQLKRRLKKAANRLRGKIKNLVDELQKKSIRFLVDNFDIILLPTFETSQMSKKARRRIRSKSVRQMLTLSHYKFKQFIKHKAFEHNKVVLDVNEAYTSKTVSWSGEIVKNLGGAKIIKSSSTGQTMDRDLNGARGIFLR 375          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A7Z9BN03_9CYAN (Transposase n=7 Tax=Microcoleaceae TaxID=1892252 RepID=A0A7Z9BN03_9CYAN)

HSP 1 Score: 113 bits (283), Expect = 1.540e-24
Identity = 93/314 (29.62%), Postives = 157/314 (50.00%), Query Frame = 1
Query:  406 KSTPADVRKSATRDRVKNFKSARAAYKARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            K  P  ++  A +D     K+A+  +KA   K  + KF+SR+    SI + K +I       S  G  K    +   + FS+           R+   +G +Y+ I  KV+     +N+  + RV+ +DPG+RT  T  S +     LG D+  + QK   +   +  ++  A C K+K  L+KA  R + + ++   +LH KT + L++ +DVI++       ++SK+ +   NK  R    LSHY F+Q LK+KA  ++KVV++ +E+YTS+     G +  +LG A+T       L +DRD+N    I +R
Sbjct:   16 KPVPYQIKSIAIKDACLAVKAAKKGFKAD-GKIRQCKFRSRKDVKQSIYIPKSAIKDCGIYHSILGGCKFKELLP--DNFSDG----------RLTLIYGEYYLTISTKVQ----QLNSENQGRVVALDPGVRTFMTFFSETSFGW-LGQDSNLQIQKLCFQLDKLVSQLSKAKC-KQKRNLKKAASRLRCKIQNFVKELHHKTARFLVENFDVILLPTFETSQMVSKSRRKLRNKSVRQMLTLSHYEFKQFLKWKAWENHKVVIDCNEAYTSKTVSWTGEIINNLGGAKTIKSNSTQLKMDRDLNGARGIFLR 310          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A0M1JJY8_9CYAN (Transposase (Fragment) n=5 Tax=Microcoleaceae TaxID=1892252 RepID=A0A0M1JJY8_9CYAN)

HSP 1 Score: 110 bits (275), Expect = 1.380e-23
Identity = 90/312 (28.85%), Postives = 154/312 (49.36%), Query Frame = 1
Query:  406 KSTPADVRKSATRDRVKNFKSARAAYKARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNK-RMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMV 1338
            K  P  ++  A +D     K+A+  +KA   K  + KF+SR+    SI + K +I       S  G  K    +   E FS+           R+   +G +Y+ I  +++     +N+  + RV+ + PG+RT  T  S +     LG D+    QK   K   +  ++  A C K+K  L+KA  R   + K+L  +LH+KT + L++ +DVI +       ++SK+ +  +   R+   LSHY F+Q LK+KA  ++K+V++ +E+YTS+     G +  +LG A+T       L +DRD+N    I +
Sbjct:   16 KPVPYQIKSIAIKDACLAVKAAKQGFKAD-GKIRQCKFRSRKDVKQSIYIPKSAIKDCGIYHSILGKGKFKESLP--ENFSDG----------RLTLTYGEYYLTISTELQ----QLNSENQGRVVALAPGVRTFMTFFSETSFGW-LGKDSNLHIQKLCFKLDKLVSRLSKAKC-KQKRNLKKAASRLGCKIKNLVKELHYKTARFLVENFDVIFLPTFETSQMVSKSRRKRNKSVRLMLTLSHYEFKQFLKWKAWENHKIVIDCNEAYTSKTVSWTGEIINNLGGAKTIKSNSTQLKMDRDLNGARGIFL 308          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A4V0XV77_PLAAG (Transposase n=1 Tax=Planktothrix agardhii CCAP 1459/11A TaxID=282420 RepID=A0A4V0XV77_PLAAG)

HSP 1 Score: 107 bits (267), Expect = 2.680e-23
Identity = 68/198 (34.34%), Postives = 110/198 (55.56%), Query Frame = 1
Query:  754 INTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNK--RMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            +N+  + RV+ +DPG+RT  T  S +     LG D+    QK   K   +  ++  A C K+K  L+KA  R + + K+L  +LH KT K L++ +DVI++       ++SK+ +   NK  R    LSHY F+Q LK+K+  ++KVV++ +E+YTS+     G +  +LG A+T       L +DRD+N    I +R
Sbjct:    4 LNSENQGRVVALDPGVRTFMTFFSETSFGW-LGKDSNLHIQKLCFKLDKLVSQLSKAKC-KQKKNLKKAASRLRCKIKNLVKELHHKTAKFLVENFDVILLPTFETSQMVSKSRRKLRNKSVRQMLTLSHYEFKQFLKWKSWENHKVVIDCNEAYTSKTVSWTGEIINNLGGAKTIKSNSTQLKMDRDLNGARGIFLR 199          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A1Y1QNJ6_9GAMM (Uncharacterized protein n=1 Tax=Thiothrix lacustris TaxID=525917 RepID=A0A1Y1QNJ6_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 4.310e-22
Identity = 120/435 (27.59%), Postives = 191/435 (43.91%), Query Frame = 1
Query:   94 SWFKTKTYTLPNKSSQNISWPSSMCSPTSCTEAEEGTKIKARRIRLKPREEQEKVLREWMKSARQTYNEALHLVKAKNAKPNL------LLNKLVVTSRETDKNSRLERMKSTPADVRKSATRDRVKNFKSARAAYKARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGR-------WYIVIPDKVRVDKANINTSAEARVIGIDPGLRT--AFTCSSSSGDVLELGID--TRFRFQKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNKRMFSYLS--HYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            SWF       PNK+   I  PS M S    TE E     +AR+I++ P  +QEK+L  WM   R  YNE + ++  +   PN       L+ +LV     T++          P  +R  A ++ V+   +A A +K R  +   V +KSR+    S                F    K + + R   V   E G+ + ++S   +   GR       WY+ +P+  + D A      + R+  +DPG+RT   F      G + E  +   TR  F  +      +  +   AT  ++K+ L KA  R      +L  +LHWKT + L D +DVI++       ++ K  +   +K + S L+  HY+F QRL+ K     KV++   E+YTS+     G +  +LG  +T   +  G V+DRD N    I +R
Sbjct:  118 SWFSVTVKENPNKNLPKIYSPSFMSSLADFTECEI---TRARKIKMLPTRQQEKLLNAWMGIYRFIYNETVWMLNGRYVAPNWMAITKWLIPELVYLYPWTEQ---------LPRAMRDGAVQEAVQAVLNAIAKFK-RTNEVQRVSYKSRKDAQQSF---------------FLRNDKWSKDRRGFSV--RELGKIRFAESLPDSLRDGRVVKDGIYWYVALPETKKRDLAE----NQGRLCALDPGVRTFQTFFSDHHCGHLGEQDVQRITRLAFHLD-----DLTSRRDKATNKRKKSALTKAMARIGNAVSNLIDELHWKTARFLTDNFDVILLPTFESSQMVIKADRKIRSKTVRSMLTLKHYTFSQRLEQKCFERGKVLIRVCEAYTSKTASWTGEIIHNLGGRKTI--KSGGFVVDRDENGARGIFLR 511          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A146M4Q7_LYGHE (Putative transposase R104 n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146M4Q7_LYGHE)

HSP 1 Score: 103 bits (257), Expect = 1.180e-20
Identity = 95/317 (29.97%), Postives = 152/317 (47.95%), Query Frame = 1
Query:  412 TPADVRKSATRDRVKNFKSARAAYKARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFFGTSKHASEVRTSEVFSEESGRHKPSQSCRIA---YCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTSIAKKMKDATCSKRKT-KLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQSTSNKRMFSYL--SHYSFRQRLKYKAG-LSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            TP D+R  A  D +K +    A   A  +K F V+FK +R   +SI L  K   +K   V F  T      +++SE   E+       Q  R+     C  R  ++ P+  R +K +    + ARVI +DPG+RT  T    SG + E+G +   R  +       +  K        RK  K ++A  R + + ++L  + H KT + L + YD+I++     Q + ++  +   +K   S L  SHY FR+RL  K    ++  V+  DES+TS+ C  CG+L + LG ++ + C  C    DRD N+  NI++R
Sbjct:   49 TPYDIRDEAMNDVLKAY----ATNFAMKRKEFTVRFKKKRAEHNSITLLAKH--WKKCGV-FHPTEWGKEPLKSSEPLPEKLSYDARLQRTRLGEFYLCIPRPLVLRPENQRPEKDD--GVSGARVIALDPGVRTFCTGYDPSGKIFEIGKNDIGRVNRLCHALDKLQSKWTQKDVRHRKRYKYQRAARRIRKKIRNLVGEFHKKTSRWLCESYDLILLPHFETQQMTTRATRRIGSKSARSMLTWSHYGFRKRLVEKTREFTHCKVILCDESFTSKTCSECGNLNERLGPSKIFKCPMCKQESDRDFNASRNILLR 356          
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Match: A0A0W8DZT6_PHYNI (Transposase IS605 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DZT6_PHYNI)

HSP 1 Score: 100 bits (250), Expect = 1.030e-19
Identity = 96/331 (29.00%), Postives = 148/331 (44.71%), Query Frame = 1
Query:  415 PADVRKSATRDRVKNFKSARAAYKARLQKPF-----EVKFKSRRLTSDSIELEKKSISFKNNMVSF----FGTSKHASEVRTSEV----FSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKANINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRF--------QKEHSKKTSIAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVIVIGKIGVQSLMSKTGQ-STSNKRMFSYLSHYSFRQRLKYKAGLSNKVVVEQDESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR 1341
            P +V  S  RD  K  K +RA +KA  +K       E++FKS++  S SIE   + I   N +V F    FG SK+   +   ++    FS    R +            ++Y+ IP +V+V K   +T    R   IDPG+R+  T     G  L LG+D    +         +  S++T    K K     KR TK+         R K + AD+H K    L   Y  +++       + S+  + S+   R     SHY F+  L YK   S   ++E +E YT++ C  CG +   + + + + C  C LVIDRDVN+  NI ++
Sbjct:   53 PEEVMDSTYRDFTKALKLSRALFKALKKKDKKTSFPELRFKSKKDNSSSIEFRNRGIKSANGLVQFKPRYFGFSKNEGFLIKEKMPDLQFSVRLLRTRDE----------KFYLCIP-RVKVFKQTTST----RTCAIDPGVRSFITMYDQDG--LTLGVDDANEYIFRRCLTIDRLISRRTRETNKRKRYRMGKRLTKMFN-------RVKAMIADMHHKVSSWLSKNYKQVLLPSFQTSDMTSRQKRISSKTSRAILTWSHYKFKMMLAYKMERSGGRMIECEEHYTTKTCSCCGRINYGITSQKVFDCNHCNLVIDRDVNAARNIFLK 359          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1350.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK09_ECTSI1.940e-4050.00OrfB_Zn_ribbon domain-containing protein n=1 Tax=E... [more]
A0A139X085_9CYAN3.990e-3129.29Transposase n=1 Tax=Scytonema hofmannii PCC 7110 T... [more]
A0A2G4EXR4_9CYAN2.190e-2828.72Transposase n=2 Tax=Tychonema bourrellyi TaxID=543... [more]
UPI0011DFF2197.970e-2728.64RNA-guided endonuclease TnpB family protein n=1 Ta... [more]
A0A7Z9BN03_9CYAN1.540e-2429.62Transposase n=7 Tax=Microcoleaceae TaxID=1892252 R... [more]
A0A0M1JJY8_9CYAN1.380e-2328.85Transposase (Fragment) n=5 Tax=Microcoleaceae TaxI... [more]
A0A4V0XV77_PLAAG2.680e-2334.34Transposase n=1 Tax=Planktothrix agardhii CCAP 145... [more]
A0A1Y1QNJ6_9GAMM4.310e-2227.59Uncharacterized protein n=1 Tax=Thiothrix lacustri... [more]
A0A146M4Q7_LYGHE1.180e-2029.97Putative transposase R104 n=2 Tax=Lygus hesperus T... [more]
A0A0W8DZT6_PHYNI1.030e-1929.00Transposase IS605 n=1 Tax=Phytophthora nicotianae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1350contigP-littoralis_Contig1350:17655..19076 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4950.XP_003678658.1
PFAMsHTH_OrfB_IS605,OrfB_IS605,OrfB_Zn_ribbon
Model size1341
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.21e-31
EggNOG OGsCOG0675@1|root,2S61S@2759|Eukaryota,3A84T@33154|Opisthokonta,3P6H3@4751|Fungi,3R2Z2@4890|Ascomycota,3RW77@4891|Saccharomycetes,3S28D@4893|Saccharomycetaceae
DescriptionProbable transposase
Cds size1341
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789624.158547-CDS-P-littoralis_Contig1350:17654..184941680789624.158547-CDS-P-littoralis_Contig1350:17654..18494Pylaiella littoralis U1_48CDSP-littoralis_Contig1350 17655..18494 -
1680789624.1753898-CDS-P-littoralis_Contig1350:18575..190761680789624.1753898-CDS-P-littoralis_Contig1350:18575..19076Pylaiella littoralis U1_48CDSP-littoralis_Contig1350 18576..19076 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1350.9.2prot_P-littoralis_Contig1350.9.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1350 17655..19076 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1350.9.2

>prot_P-littoralis_Contig1350.9.2 ID=prot_P-littoralis_Contig1350.9.2|Name=mRNA_P-littoralis_Contig1350.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=447bp
VSTKLICRTGIDSVDSLSTFANDQEGGGTHDSWFKTKTYTLPNKSSQNIS
WPSSMCSPTSCTEAEEGTKIKARRIRLKPREEQEKVLREWMKSARQTYNE
ALHLVKAKNAKPNLLLNKLVVTSRETDKNSRLERMKSTPADVRKSATRDR
VKNFKSARAAYKARLQKPFEVKFKSRRLTSDSIELEKKSISFKNNMVSFF
GTSKHASEVRTSEVFSEESGRHKPSQSCRIAYCFGRWYIVIPDKVRVDKA
NINTSAEARVIGIDPGLRTAFTCSSSSGDVLELGIDTRFRFQKEHSKKTS
IAKKMKDATCSKRKTKLRKAWYRCQARAKHLAADLHWKTIKHLLDRYDVI
VIGKIGVQSLMSKTGQSTSNKRMFSYLSHYSFRQRLKYKAGLSNKVVVEQ
DESYTSQACFRCGHLKKDLGAAETYLCRECGLVIDRDVNSGYNIMVR
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mRNA from alignment at P-littoralis_Contig1350:17655..19076-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1350.9.2 ID=mRNA_P-littoralis_Contig1350.9.2|Name=mRNA_P-littoralis_Contig1350.9.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1422bp|location=Sequence derived from alignment at P-littoralis_Contig1350:17655..19076- (Pylaiella littoralis U1_48)
GTGTCGACGAAGTTGATATGCCGCACCGGGATAGACTCTGTGGATTCGCT TTCGACTTTTGCGAATGACCAAGAAGGAGGAGGAACTCACGACTCATGGT TCAAGACCAAAACATACACTCTGCCGAACAAGAGCTCGCAGAATATCTCG TGGCCATCATCTATGTGTTCTCCTACAAGCTGCACGGAAGCAGAAGAAGG TACAAAGATAAAGGCCCGAAGGATACGCCTCAAACCACGAGAGGAGCAGG AGAAAGTGCTCCGGGAGTGGATGAAGTCTGCACGACAAACCTACAATGAA GCCCTACATCTCGTCAAGGCCAAGAACGCAAAACCTAACCTACTTCTGAA TAAACTCGTCGTCACCTCTCGTGAAACGGACAAGAATTCGAGACTAGAAC GCATGAAGTCAACCCCAGCTGATGTCAGGAAGTCGGCCACGCGAGACCGT GTGAAGAACTTCAAGAGCGCTCGTGCTGCGTACAAAGCCCGACTACAGAA AGTCAAGTTCGGGAAGGCGAGAATCAAGAAGATGCGCAAGTCGGGGAAGT TCAAGGGAAGACGCCGCTACAAAAAGAGGAAGCCGTTCGAGGTGAAGTTC AAATCCCGGCGTCTCACATCCGATTCCATTGAGCTGGAAAAGAAATCAAT CTCGTTTAAGAACAACATGGTTTCCTTCTTCGGAACGAGCAAGCATGCGT CGGAAGTTCGTACGAGCGAGGTGTTTTCGGAAGAATCTGGTCGACATAAA CCGTCTCAGAGCTGTAGGATAGCCTACTGTTTTGGGAGGTGGTATATCGT CATACCCGACAAAGTACGAGTCGACAAGGCGAATATCAACACATCCGCCG AAGCACGAGTCATCGGGATAGACCCTGGACTTCGAACTGCCTTTACATGT TCTTCTAGCTCCGGTGACGTCTTGGAGCTAGGAATCGACACTCGGTTCCG CTTCCAGAAAGAACACTCCAAGAAAACCTCCATCGCCAAGAAGATGAAGG ATGCAACATGCTCGAAGAGAAAGACAAAGCTAAGAAAAGCTTGGTACCGC TGTCAAGCGAGAGCCAAGCATCTCGCAGCCGACCTACACTGGAAAACCAT CAAGCATCTCCTGGATAGATACGACGTCATTGTGATAGGGAAGATCGGCG TCCAATCTCTCATGTCCAAGACAGGACAGTCTACCAGCAATAAGAGGATG TTCTCGTACTTGAGCCACTACTCTTTTCGACAAAGGCTGAAGTATAAAGC TGGGCTTTCCAACAAAGTAGTGGTTGAACAGGATGAGTCGTACACGTCCC AGGCATGTTTCCGATGTGGCCACCTTAAGAAGGACCTTGGTGCGGCAGAG ACTTATCTCTGTAGAGAGTGTGGACTTGTGATAGATCGGGATGTTAATTC TGGGTACAACATCATGGTTCGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1350:17655..19076-

>mRNA_P-littoralis_Contig1350.9.2 ID=mRNA_P-littoralis_Contig1350.9.2|Name=mRNA_P-littoralis_Contig1350.9.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1341bp|location=Sequence derived from alignment at P-littoralis_Contig1350:17655..19076- (Pylaiella littoralis U1_48)
GTGTCGACGAAGTTGATATGCCGCACCGGGATAGACTCTGTGGATTCGCT
TTCGACTTTTGCGAATGACCAAGAAGGAGGAGGAACTCACGACTCATGGT
TCAAGACCAAAACATACACTCTGCCGAACAAGAGCTCGCAGAATATCTCG
TGGCCATCATCTATGTGTTCTCCTACAAGCTGCACGGAAGCAGAAGAAGG
TACAAAGATAAAGGCCCGAAGGATACGCCTCAAACCACGAGAGGAGCAGG
AGAAAGTGCTCCGGGAGTGGATGAAGTCTGCACGACAAACCTACAATGAA
GCCCTACATCTCGTCAAGGCCAAGAACGCAAAACCTAACCTACTTCTGAA
TAAACTCGTCGTCACCTCTCGTGAAACGGACAAGAATTCGAGACTAGAAC
GCATGAAGTCAACCCCAGCTGATGTCAGGAAGTCGGCCACGCGAGACCGT
GTGAAGAACTTCAAGAGCGCTCGTGCTGCGTACAAAGCCCGACTACAGAA
ACCGTTCGAGGTGAAGTTCAAATCCCGGCGTCTCACATCCGATTCCATTG
AGCTGGAAAAGAAATCAATCTCGTTTAAGAACAACATGGTTTCCTTCTTC
GGAACGAGCAAGCATGCGTCGGAAGTTCGTACGAGCGAGGTGTTTTCGGA
AGAATCTGGTCGACATAAACCGTCTCAGAGCTGTAGGATAGCCTACTGTT
TTGGGAGGTGGTATATCGTCATACCCGACAAAGTACGAGTCGACAAGGCG
AATATCAACACATCCGCCGAAGCACGAGTCATCGGGATAGACCCTGGACT
TCGAACTGCCTTTACATGTTCTTCTAGCTCCGGTGACGTCTTGGAGCTAG
GAATCGACACTCGGTTCCGCTTCCAGAAAGAACACTCCAAGAAAACCTCC
ATCGCCAAGAAGATGAAGGATGCAACATGCTCGAAGAGAAAGACAAAGCT
AAGAAAAGCTTGGTACCGCTGTCAAGCGAGAGCCAAGCATCTCGCAGCCG
ACCTACACTGGAAAACCATCAAGCATCTCCTGGATAGATACGACGTCATT
GTGATAGGGAAGATCGGCGTCCAATCTCTCATGTCCAAGACAGGACAGTC
TACCAGCAATAAGAGGATGTTCTCGTACTTGAGCCACTACTCTTTTCGAC
AAAGGCTGAAGTATAAAGCTGGGCTTTCCAACAAAGTAGTGGTTGAACAG
GATGAGTCGTACACGTCCCAGGCATGTTTCCGATGTGGCCACCTTAAGAA
GGACCTTGGTGCGGCAGAGACTTATCTCTGTAGAGAGTGTGGACTTGTGA
TAGATCGGGATGTTAATTCTGGGTACAACATCATGGTTCGC
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