mRNA_P-littoralis_Contig1350.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: B5LWM8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM8_9PHYC) HSP 1 Score: 201 bits (512), Expect = 6.090e-62 Identity = 92/165 (55.76%), Postives = 127/165 (76.97%), Query Frame = 1
Query: 1 PQKEKVPKTTWKETVQCWKNGKNLPKIKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTK-LNGKTTPVSFYNLDKSATLVSPPDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYVSALKN 492
P + + + TW + V W G +LP++KSSVF ETSR + GS F QK AA+R+LP++M GD+S FTK L G+T+PVSFYNL+++A LV+PPD+GKNF+H+ F+K+ + QER+ LWR+VA + KK++KGE VYVSTHGT +PWLH+R++T PKYYVS LK+
Sbjct: 123 PSRPRKTRATWNDVVAKWYGGIDLPQVKSSVFWETSRISADGSSTFKQKQVAASRDLPMSMVGDSSAFTKYLYGQTSPVSFYNLNRTAVLVAPPDTGKNFAHLGLFYKNSTTQERKQLWRKVAEEIMKKIRKGESVYVSTHGTNIPWLHIRLDTVPKYYVSDLKH 287
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: Q8QN82_ESV1K (EsV-1-207 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN82_ESV1K) HSP 1 Score: 173 bits (438), Expect = 8.220e-52 Identity = 83/154 (53.90%), Postives = 112/154 (72.73%), Query Frame = 1
Query: 28 TWKETVQCWKNGKNLPKIKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTK-LNGKTTPVSFYNLDKSATLVSPPDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYVSAL 486
TW + ++ WK GK+LP IK SVF ETS A +GG F QKT +AAR LP+T+ D ++F+ + K TPV+F N L+ PPD+GKNFSH+ATF+KH S E+ LW++VAV +++KLK+GE VYVSTHGTGV WLHVR+ + P YYV+++
Sbjct: 52 TWNDVIKAWKAGKDLPDIKGSVFWETSVATAGGDSPFRQKTKSAARALPMTLPADPAVFSHHMKNKKTPVAF-NSFGGTLLIIPPDTGKNFSHLATFYKHGSDAEKRALWKKVAVELQRKLKRGETVYVSTHGTGVSWLHVRLASRPMYYVTSV 204
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: Q6XLX1_9PHYC (FirrV-1-C7 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLX1_9PHYC) HSP 1 Score: 164 bits (414), Expect = 4.630e-48 Identity = 80/155 (51.61%), Postives = 110/155 (70.97%), Query Frame = 1
Query: 22 KTTWKETVQCWKNGKNLPKIKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTK-LNGKTTPVSFYNLDKSATLVSPPD-SGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYVS 480
K TWK+ ++ WK GK+LPKIK SVF ETS +GG E+ +KT +A ELP+ M+ D+S F++ L+GK PVSF N + TLV PPD S + FSH+ F+K+ S + LW++VA+ +EK +KK + VYVSTHG G+PWLHVRI +PKY+V+
Sbjct: 56 KKTWKDVLKSWKAGKDLPKIKGSVFWETSAIKNGGDVEYKEKTKSARSELPIHMRSDSSSFSEYLDGKLGPVSFNNSGGTCTLVCPPDGSDQEFSHLGQFYKNASKNQISALWKKVAMEIEKMMKKHKTVYVSTHGKGIPWLHVRICKSPKYFVT 210
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: D7FZG8_ECTSI (EsV-1-207 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG8_ECTSI) HSP 1 Score: 159 bits (403), Expect = 2.700e-46 Identity = 80/143 (55.94%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 61 GKNLPKIKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTK-LNGKTTPVSFYNLDKSATLVSPPDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYVSAL 486
GK+LP IK SVF ETS A +GG F QKT +AAR LP+T+ D ++F + K TPV+F N LV PPD+GKNFSH+ATF+KH S E+ LW++VAV +++KLK+GE VYVSTHGTGV WLHVR+ + P YYV+++
Sbjct: 80 GKDLPDIKGSVFWETSVATAGGDSPFRQKTKSAARALPMTLPADPALFAHHMKNKKTPVAF-NSFGGTLLVIPPDTGKNFSHLATFYKHSSDAEKRALWKKVAVELQRKLKRGETVYVSTHGTGVSWLHVRLASRPMYYVTSV 221
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: D7G321_ECTSI (EsV-1-207 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G321_ECTSI) HSP 1 Score: 148 bits (374), Expect = 8.390e-43 Identity = 77/146 (52.74%), Postives = 97/146 (66.44%), Query Frame = 1
Query: 52 WKNGKNLPKIKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTK--LNGKTTPVSFYNLDK-SATLVSPPDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYVS 480
WK G+ LP+IKSSVF E S A++GG F K +AAR LP D + F + PVSF + S TLV PPDSGKNFSHI F+KH ++ ER+ LWR+VA+ +EKKL +GE VYVSTHG GV W+HVR+ TP+Y V+
Sbjct: 2 WKEGRMLPEIKSSVFWECSPAYNGGDSLFHSKIKSAARVLPAKTPADRNPFAMHLRRARGVPVSFRSSSTPSTTLVIPPDSGKNFSHIGNFYKHSTLGERKALWRKVAIELEKKLARGETVYVSTHGGGVHWVHVRLSLTPRYNVT 147
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: A0A6T6WIS4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6WIS4_9EUKA) HSP 1 Score: 80.5 bits (197), Expect = 5.890e-16 Identity = 39/92 (42.39%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 208 KLNGKTTPVSFYNLDKSATLVSPPDSGKN---FSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYY 474
KL G + F NL + A L+ P S KN F+H+A F ++ +++ LW + + + L++ + V+VSTHGTGV WLHVRI+T PKYY
Sbjct: 74 KLKGSNSVSVFPNLGRDAYLIVPAQSTKNAQTFAHLAAFVRNAPEDQKQALWEKTGKTFQTVLEQNKTVWVSTHGTGVYWLHVRIDTRPKYY 165
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: A0A6C0HMK7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HMK7_9ZZZZ) HSP 1 Score: 79.7 bits (195), Expect = 9.080e-16 Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 31 WKETVQCWKNGKNL--PK-IKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTKLNGKTTPVSFYNLDKSATLVSP-PDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYV-SALKN 492
W + + W+NG L PK +K TS + G+ F Q + + K D + + + VSF NL K LV P P GKN++ + F + ++++ W+ VA +K + + V++S HG GV + HVRI T PKYY + LKN
Sbjct: 3 WSDVLTNWENGITLKYPKNVKGKFQWNTSVLKNDGNVAFTQTFRTNEKLAQIQNKKDFEEYIEKSQNKYVVSFPNLSKDTMLVIPMPIQGKNYATLRDFIDNAPKTQQQEFWKHVAKVAKKFMNEKGKVWISVHGLGVNYTHVRISTRPKYYFDNELKN 161
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: A0A6C0E4B2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E4B2_9ZZZZ) HSP 1 Score: 78.6 bits (192), Expect = 2.530e-15 Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 31 WKETVQCWKNGKNL--PK-IKSSVFGETSRAHSGGSCEFIQKTTAAARELPVTMKGDNSIFTKLNGKTTPVSFYNLDKSATLVSP-PDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYY 474
W E + W+NG L PK +K TS + G ++Q + K D + K + VSF NL+K LV P P GKN++ + F + S ++++ W++VA +K + + V++S HG GV + HVRI T+PKYY
Sbjct: 3 WSEILANWENGIVLKYPKNVKGKFQWNTSVLKNDGKVAYLQTFRTNNKLAQRQNKKDFQEYFKNSQNKYVVSFPNLNKDTMLVVPMPVRGKNYATLRDFIDNASEIQQQEFWKKVAEVAKKFMNEKGKVWISVHGLGVDYTHVRISTSPKYY 154
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: A0A7Y1XFB4_9GAMM (Uncharacterized protein n=1 Tax=Pseudomonadales bacterium TaxID=1891229 RepID=A0A7Y1XFB4_9GAMM) HSP 1 Score: 76.3 bits (186), Expect = 3.870e-14 Identity = 41/109 (37.61%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 163 RELPVTMKGDNSIFTK-LNGKTTPVS-FYNLDKSATLVSP--PDSGKNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYYV 477
+++ + + D++ F + L G T V+ F NL + A L++P P +G +++H+A F ++ + E LW+QV +V +L + ++++ GTGVPWLHVRI+T PKYYV
Sbjct: 79 KDISLERRADSAAFEEHLTGSTAAVAAFPNLGRDAFLLAPTDPGNGADYAHLAAFLRNAPGPQIEALWQQVGQAVSLRLNV-KPIWLNCAGTGVPWLHVRIDTRPKYYV 186
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Match: UPI00034D4F44 (hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034D4F44) HSP 1 Score: 74.3 bits (181), Expect = 2.010e-13 Identity = 37/119 (31.09%), Postives = 66/119 (55.46%), Query Frame = 1
Query: 133 EFIQKTTAAARELPVTMKGDNSIFTKLNGKTTP---VSFYNLDKSATLVSPPDSG--KNFSHIATFHKHCSVQEREDLWRQVAVSVEKKLKKGEGVYVSTHGTGVPWLHVRIETTPKYY 474
EF+ ++P D++ F K P ++F NL K A L+ P G ++ H+A+F +H +++ +LW++V ++K L ++++T G GVPWLH+R+++ PKYY
Sbjct: 73 EFVVLDNPLLNKIP-----DSTAFNNYLVKNAPESIITFANLGKDALLIVPSQQGAKSSYGHLASFIRHAPEEQKHNLWQKVGAVMQKNLSDAP-IWLNTAGGGVPWLHIRLDSRPKYY 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1350.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1350.7.1 >prot_P-littoralis_Contig1350.7.1 ID=prot_P-littoralis_Contig1350.7.1|Name=mRNA_P-littoralis_Contig1350.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=166bp PQKEKVPKTTWKETVQCWKNGKNLPKIKSSVFGETSRAHSGGSCEFIQKTback to top mRNA from alignment at P-littoralis_Contig1350:16019..16516+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1350.7.1 ID=mRNA_P-littoralis_Contig1350.7.1|Name=mRNA_P-littoralis_Contig1350.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=498bp|location=Sequence derived from alignment at P-littoralis_Contig1350:16019..16516+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1350:16019..16516+ >mRNA_P-littoralis_Contig1350.7.1 ID=mRNA_P-littoralis_Contig1350.7.1|Name=mRNA_P-littoralis_Contig1350.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=498bp|location=Sequence derived from alignment at P-littoralis_Contig1350:16019..16516+ (Pylaiella littoralis U1_48)back to top |