prot_P-littoralis_Contig1350.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1350.3.1
Unique Nameprot_P-littoralis_Contig1350.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length201
Homology
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: D8LP41_ECTSI (Mannuronan C-5-epimerase (Partial) (Fragment) n=2 Tax=root TaxID=1 RepID=D8LP41_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.710e-51
Identity = 91/147 (61.90%), Postives = 111/147 (75.51%), Query Frame = 0
Query:   55 SGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGNVFPASVKYVFSDSCVNTASDVGFAEVCDNA 201
            SGIAFLESS G+VYNNTVR NVHGIR SVGSR  VVA NTFE N+G+D+Y Y G+D VVE +S N TG++ + N+FSGN GG+RLDDS+DTQ + NSV DW  +E+  S N L+ GN FP  + Y  S SC+N+ASDV F EVC +A
Sbjct:  339 SGIAFLESSGGLVYNNTVRENVHGIRFSVGSRQNVVAENTFEANSGYDLYQYAGSDEVVEVDSGNPTGNVIYANLFSGNVGGARLDDSIDTQLIINSVEDWASIEMVDSMNTLVQGNSFPDDMMYTSSGSCINSASDVSFGEVCTDA 485          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: A0A6H5KU33_9PHAE (MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU33_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 4.620e-49
Identity = 91/147 (61.90%), Postives = 107/147 (72.79%), Query Frame = 0
Query:   55 SGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGNVFPASVKYVFSDSCVNTASDVGFAEVCDNA 201
            SGIAFLESS G+VYNNTVR NVHGIR SVGSR  VVA NTFE+NTG D+Y Y G D VVE +S N T ++ F N FSGN GG+RLDDSV TQ V+N+V DW   ++  S N LI GN FP  + Y  S SC+N+ASDV F ++C NA
Sbjct:  634 SGIAFLESSGGLVYNNTVRENVHGIRFSVGSRQNVVADNTFEENTGHDLYQYAGNDAVVEVDSGNPTSNVIFANQFSGNTGGARLDDSVGTQLVANTVEDWASFDMGDSVNTLIEGNTFPVDMMYTSSGSCINSASDVTFGDICTNA 780          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 3.090e-23
Identity = 73/207 (35.27%), Postives = 108/207 (52.17%), Query Frame = 0
Query:    1 MFNCGNHGLIISKYYDNTVIASNHIHDNG--GVGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSN--SVGDWERVELRGSD--NLLIVGNVFPASVKY---VFSDSCVNTASDVGFAEVC 198
            ++N G HG+I SK  +   I  N ++       GIF H  SDDA +  N V +NGD+G+A LES    V  NT  NN +G+R+SVG  D V + N   +N+ ++ YTY G+D      S     ++F  N FSG     ++ ++  TQF+ N   VGD + + +R  D  N ++ GN       +   V +DSC +  SD G+  VC
Sbjct:  306 VYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.770e-22
Identity = 72/208 (34.62%), Postives = 109/208 (52.40%), Query Frame = 0
Query:    1 MFNCGNHGLIISKYYDNTVIASNHIHDNG--GVGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSN--SVGDWERVELR---GSDNLLIVGNVFPASVKY---VFSDSCVNTASDVGFAEVC 198
            ++N G HG+I SK  +   I  N ++       GIF H  SDDA +  N V +NGD+G+A LES    V  NT  NN +G+R SVG  D V + NT  +N  ++ Y+Y GTD      S     ++F  N FSG     ++ ++  TQF+ N   VGD + + +R    ++NL+  GN      ++   V +D+C +  +D G+  VC
Sbjct:  302 VYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLM-QGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: A0A6H5JTN9_9PHAE (MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN9_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.170e-20
Identity = 63/174 (36.21%), Postives = 95/174 (54.60%), Query Frame = 0
Query:   32 GIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSN--SVGDWERVELRGSDNL--LIVGNVFPASVKY---VFSDSCVNTASDVGFAEVC 198
            GIF H  SDDA +  N V +NGD+G+A LES    V +NT  NN +G+R SVG  D V + NT  +N+ ++ Y+Y G+D      S     ++F  N F+G A   ++ ++  TQF+ N   VGD + + +R  D    L+ GN      ++   V +DSC +  SD G+  +C
Sbjct:   19 GIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRFSVGCADNVFSENTISNNSKYNAYSYLGSDEPDVVSSGRSQNNVFSQNSFAGAAETIKIKEADGTQFLDNVFEVGDADGLVVRFDDATGNLMKGNTGLDDGEFELKVTNDSCFDEESDSGYEPLC 192          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.340e-20
Identity = 64/201 (31.84%), Postives = 99/201 (49.25%), Query Frame = 0
Query:    1 MFNCGNHGLIISKYYDNTVIASNHIHDNGG--VGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGNVFPASVKY-VFSDSCVNTASDVGFAEVC 198
            ++N GNHG+I SK  +                VGIF H  SDDA +  N   +NGD+G+A +ES    V NN   +N +G+R+SVG  D V + N   D++ ++VYTY G+D     +S     +IF DN  +G     +L  +  T+F+ N+    + V    + + ++ GN    S    V   +C +  SD  +  VC
Sbjct:  125 VYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 325          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.680e-17
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = 0
Query:    1 MFNCGNHGLIISKYYDNTVIASNHIH--DNGGVGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGNVFPA-SVKYVFSDSCVNTASDVGFAEV 197
            ++N G HG+I SK  +   I  N ++   +G  GIF H  SD+  +  N V +NGD+G+A LES    V +NT  NN +G+RLSVG    + + N    +  F+ ++Y G D     +S     ++F +N   G      L ++  TQF+ N+  D   +    +   L+ GN   A S   V   +  + +SD GF  +
Sbjct:  273 VWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSDHGFEPI 472          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 2.890e-17
Identity = 57/169 (33.73%), Postives = 85/169 (50.30%), Query Frame = 0
Query:   31 VGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGNVFPASVKY-VFSDSCVNTASDVGFAEVC 198
            VGIF H  SDDA +  N    NGD+G+A +ES    V NN   +N +G+RLSVG  D V + N   D++ ++VYTY G+D     +S     +IF DN  +G     +L  +  T+F+ N+    +      ++  L+ GN    S    V   +C +  SD  +  VC
Sbjct:  334 VGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.190e-16
Identity = 57/200 (28.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:    1 MFNCGNHGLIISKYYDNTVIASNHIHD--NGGVGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGNVFPASVKY-VFSDSCVNTASDVGFAEV 197
            +++ G HG+I SK  +   I  N ++   +   GIF +  SDDA +  N V +NGD+G+A +ES    V +N   NN +G+R+SVG    + + N    +T ++ Y+Y GTD     +S     + F +N   G     ++ D+  T+F+ NS  D   +    +   ++ GN      K  V + +  +  +D GF  +
Sbjct:   66 VYDNGYHGIIASKRCNGVSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGNTGLTDTKLKVHNGASFDKRADYGFEPI 265          
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 85.9 bits (211), Expect = 4.650e-16
Identity = 64/202 (31.68%), Postives = 96/202 (47.52%), Query Frame = 0
Query:    1 MFNCGNHGLIISKYYDNTVIASNHIHDNGG--VGIFPHFISDDAQISHNVVENNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTGFDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSNSVGDWERVELRGSDNLLIVGN--VFPASVKYVFSDSCVNTASDVGFAEVC 198
            ++N GNHG+I SK  +                VGIF H  SDDA +  N V +NGD+G+A +E+    V NN   +N +GIR+SVG  D V + N    ++ ++VYTY G+D     +S             SG     +L  +  T+F+ N+    + +        L+ GN  +  AS+K V   SC +  SD  +  VC
Sbjct:  299 VYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLK-VTDGSCFDKKSDSAYKPVC 499          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1350.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LP41_ECTSI1.710e-5161.90Mannuronan C-5-epimerase (Partial) (Fragment) n=2 ... [more]
A0A6H5KU33_9PHAE4.620e-4961.90MEP9 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FXE4_ECTSI3.090e-2335.27Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.770e-2234.62Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A0A6H5JTN9_9PHAE1.170e-2036.21MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ9_9PHAE1.340e-2031.84Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ8_9PHAE2.680e-1731.00Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAK2_9PHAE2.890e-1733.73Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
Q7XAK0_9PHAE2.190e-1628.50Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA4.650e-1631.68Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 85..105
e-value: 72.0
score: 12.2
coord: 39..61
e-value: 3.1
score: 16.8
coord: 15..37
e-value: 700.0
score: 8.3
coord: 62..83
e-value: 16.0
score: 14.4
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 44..76
e-value: 3.6E-6
score: 24.6
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 3..151
e-value: 1.1E-14
score: 54.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..128
e-value: 4.1E-26
score: 93.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1350contigP-littoralis_Contig1350:9348..9950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1350.3.1mRNA_P-littoralis_Contig1350.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1350 9348..10744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1350.3.1 ID=prot_P-littoralis_Contig1350.3.1|Name=mRNA_P-littoralis_Contig1350.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp
MFNCGNHGLIISKYYDNTVIASNHIHDNGGVGIFPHFISDDAQISHNVVE
NNGDSGIAFLESSRGVVYNNTVRNNVHGIRLSVGSRDAVVAGNTFEDNTG
FDVYTYGGTDPVVEAESSNITGSIFFDNVFSGNAGGSRLDDSVDTQFVSN
SVGDWERVELRGSDNLLIVGNVFPASVKYVFSDSCVNTASDVGFAEVCDN
A
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR022441Para_beta_helix_rpt-2
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence