mRNA_P-littoralis_Contig135.105.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: A0A6H5L8P8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P8_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 1.520e-120 Identity = 895/2076 (43.11%), Postives = 1033/2076 (49.76%), Query Frame = 1
Query: 1033 LQGVLEMHAERLEDQAGEREELWKAIEGLRLAEPSDITGFTEIDRAGLTFGSGMPLGGFGMCVEALWHGSRVSVKQLLPPTRTRGAAPRVVAXXXXXXXXXASAASEMRRQVRLLQALRFEFLVPIFGACTAPPDGVSVVMPLAPFGSLHAFLHQGAGTAAAAAETMT-GRDRGGGVLRRGITRSTSYGXXXXXXXXXXXDSGESQRVAGGGXXXXXXXGGAXXAXXAXXXXXXXXXXXXXXXXXXXXKGRYPHLSAGLKAAMAFDVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAK----NISSPPTYIDASGSHHR--------------GWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLPNAPMSPGGTSATATATATGLPESKRDGQEATGAVTAVSGVAGSSY----------ALASPSHRRSSSSLSS---------------------PETRLGEHGXXXXXXXXX------------------AGWVPRVPSRVEAHPAQVQLMQRCLRHERELRPGGFYVIVSFLHDLVKSLGGDERRANALSLGSNSNAPPELRVPRAPGELVPAGAXXXXXXXXXXXXXXXXNG-GEATRSQQERNWSAEERQAAFDAQARLERQLAESEARCALLEEAERKAXXXXXXXXXXXXXXXXXXXXXXXXXFG----SGXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAAKAEAKLXXXXXXXXXXXXXXXXXXPETVEXXXXXXXXXXXXXX------KKLSVANGGA-----VLPESVLRAFGG-----------YDAESDDGLSRRRKSRERARAIGFLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRGSESTGKRALKALLREAQEKEKAMQKEVEEVRAREETMRAELRNGVSGAHKIHAQLEKVHKREQELREWNAILQGVIQAAD----GKDGKKNQSDTAFSPSRKFRSAPVNRAEAPASTXXXXXXXXXXXXXXXXTQAAETT-SGESRAGSH----------------------EATATSTPVSIST-------HPYSS-PHSSSTQASASNTIASATGDRSGPSGTSGVASSKASPXXXXXXXXXXXSARDSSECSQTASVASVDGXXXXXXXXXXXXXXXXXXXXAYGRNSEKGRSAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADELDGSASLPLGKESRREIKEWERRVAEVLSAIERRPAPCESEPIDASASP--------------------------------------------------------GGEEAARGTAEGRTNRHQILEKSE--EGGGPSRAKTPGLLEDAXXXXXXXXXXXXXXXGKRSSLDGKRERTTD---GSLSRRDAGVLDSSGXXXXXXXLRESEEASEPRKSGRVSSRDKERQRRKQYKREKHAARAEIARLKGGLSKDASLDSATAAGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFASNGDGAGSIDVDAAAAAAVVARMTEGGTEAGTGILAPSLVDPGGGTGXXXXXXXXXXXXXXXXGFAAAFGGSVSGDRRASAAAVGGREAPSVTAISDTSAVSTASVSTVGGSAGRAGSVREQGSSTLGQAAAVEGVADNVRSSLLRSGHGGGMLSSVSRTRSLASAPVSSVGGDGKGNQESKSICSSGLLAAYPIPMGLTVQQXXXXXXXLLREQRYAPRITASAAAASMVASFAGEPDGGDRAALAITFRNCHGPQWLRRFGWADEGADEKYGVAWTTRKLRVLKLELGTNRVEGYIPKELGVMAHLLCLXXXXXXXXXXXXXXXXXXSSLQQXXXXXXXXXXXXXXXXXXXXXXRYLGLNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQYVNLGFNGGGNNLTGEVPVKAFARLPHLAWLSMTDNPGLAVKRGRFVTTTQSLLKKVLPPKCDVYL 6687
+Q +LEMH+ERLED+ EREELWKAIEGLRLAEPSDITGFTEIDRA LTFGSGMPL +C ++ + LP +AAS MRRQ+RLLQAL FEFLVPI+GACTAPP+GVS+VMPLAP GSLHAFLH+GAGT AA R RG GVLRR ++ + S GGG XXXXXX A R+P LSAGLKAAMAFDVARGMLHLHENGFLHGALKPKN+LVFDNLRLMVSDYGLL K NI+S + +GS H XXXXX GE+ W APEV +DGEEH+ +SD+FSYGG+L E L L + TA P + Q S + +++ +L SP+ + L+ P + +GXXXXXXXXX AGWVPRVP+ VEAHP QVQLMQRCLRHERELRPGGFY IV FLHDLVKSLGGDERR NAL LG + XXXXXXXXXX G G +QER+WSA+ERQA RLERQLAES+ARCA L+EAERKA XXXXXXXXXXXXXXXXXXXXX FG SG XXXXXXX A+ A A XXXX XXXXX K S NGG LPE V+RAFG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX RGS + + L LREA+ KEKAM +E+EE+RARE+TMR EL NG++GA KI+AQL++ +REQELR N+ILQ I ++ G+ ++ K S+ N A A A+T + + T SG + G + +TS P +++T P+++ P +++T ++A A DR G +G ++ XXXXXXXXXXX + A++ G S+K S V XXXXXXXXXXXXXXXXXXXXXXXXXX S P +ESRREI EWE VLS+ D+ ASP K++ G P G+ E G+R++ KRE + + GS SR+ G S XXXXXXX E S K KERQ RKQY+ EK A AEIARLK L +A AA +A XXXXXXXXXXXXXX AS G G V +R G G++ G+GXXXXXXXXXXXXXXXX AVG AA G G + R + P SS ++ + AAYP+PMGL T + AASM + FA EPDGGDRAALAI F++CHG +WLRR GW D +D ++GVAWTT RVLKLELG NR+EGYIP+ELGVM+ L XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +NG GN+LTGE+P+KAFA++P+LAWLS+TDNP L VKRGRFVTTTQS+LKKVLP KCDV L
Sbjct: 1 MQRLLEMHSERLEDRVEEREELWKAIEGLRLAEPSDITGFTEIDRAHLTFGSGMPL----VCHFSISRDCGGGGSRALP----------------------TAAASAMRRQIRLLQALHFEFLVPIYGACTAPPNGVSLVMPLAPLGSLHAFLHEGAGTVAAXXXXXXXARGRGSGVLRRVLSGTVP----------------PSGGFVGGGAXXXXXXXRAGGGDSGRGKDE-----------------RHPRLSAGLKAAMAFDVARGMLHLHENGFLHGALKPKNVLVFDNLRLMVSDYGLLSVKAENNNINSNNVRVGGNGSKHHQLPPAGYPSPVAXXXXXXXXXXXXVDGSAGPPPMVSSGGPGEECWIAPEVCIDGEEHSYESDVFSYGGVLREALLRLLSVVMV--------VTAMVAAQPRQPQQYQFLNHMRPHDSNINTANHVHPRDRTQQRSLVSPTPSTACQLLAEELLQAAPGGILPPGMSAMQRQPAVSMSANGXXXXXXXXXXXXXXXXXXXXXXXXXXXAGWVPRVPAGVEAHPGQVQLMQRCLRHERELRPGGFYPIVLFLHDLVKSLGGDERRNNALWLGPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPEGVGGAGGVEAGRQERDWSAQERQA------RLERQLAESQARCAELQEAERKASXXXXXXXXXXXXXXXXXXXXXVMAFGNDDGSGRPRSVERLLKAXXXXXXXTAEERVGEGAMAASAATAPATTSEDESVAGDSLSXXXXXXXXXXXXXXIDGDSERGGSVEVLVKTPSQRNGGGGGAGFELPEKVVRAFGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVGAXXXXXXXXXXRGSADS-QMLLSTRLREARAKEKAMLREMEEMRAREQTMRGELVNGLAGARKIYAQLKEGRQREQELRATNSILQAKIASSSFSSTGEGERQEGGAVVPRTPEKMPSSSKNGAAATAATSGSDRHPGASMPPSHSSATSATPFSGAAGTGXXXXXXXXXXXXXXXXXXXIAVLSSSRSTSPPPAMTTPRGAVPLKPFATRPPTAATVSTA------AAADRGGELEVNGADDTQRQXXXXXXXXXXXXXXXXXXXXXDLMASATL-------------------VKDKVGTVSDKPSSEVPSAXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXSPPQSQESRREIVEWE-----VLSSTG-----------DSLASPEDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNDVPRGSPPEAGGGLGVSE-----------------GERAAAAIKRENSGNESIGSKSRKSKGHRRRSXXXXXXXXXXGKERVSLELK--------KERQLRKQYEEEKSTAEAEIARLKAALDAATKTTTAVAATSAATRALPAVDKKPAAAGEAENAVSNXXXXXXXXXXXXXXTGGASAGAG-------------VASRRNSGRDN---GVI---------GSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAVG--------------------------------------------FAAXXXXXXXXXXXXXPKGKG----AEEERPALQRAMPTSS---------------AAAIFAAYPLPMGLAAGVPGHNS-------------TVAREAASMASKFAAEPDGGDRAALAILFQSCHGLRWLRRAGW-DGDSDRRHGVAWTTENARVLKLELGNNRLEGYIPRELGVMSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNGVGNDLTGEIPIKAFAKMPNLAWLSITDNPRLTVKRGRFVTTTQSVLKKVLPSKCDVML 1829
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: D8LSH3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH3_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.720e-24 Identity = 70/140 (50.00%), Postives = 86/140 (61.43%), Query Frame = 1
Query: 5653 GKGNQESKSIC--------SSGLLAAYPIPMGLTVQQXXXXXXXLLREQRYAPRITASAAAASMVASFAGEPDGGDRAALAITFRNCHGPQWLRRFGWADEGADEKYGVAWTTRKLRVLKLELGTNRVEGYIPKELGVMA 6048
GKG++E + ++ + AAYP+PMGL T + AASM + FA EPDGGDRAALAI FR+CHG +WLRR GW D +D ++GVAWT RVLKLELG NR+EGYIPKELGVM+
Sbjct: 961 GKGSEEERPALQHAVPMSSAAAMFAAYPLPMGLAAGVPGHNS-------------TVAREAASMASKFAAEPDGGDRAALAILFRSCHGLRWLRRAGW-DGDSDGRHGVAWTAENARVLKLELGNNRLEGYIPKELGVMS 1086
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: A0A836CHI2_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI2_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 2.070e-8 Identity = 42/125 (33.60%), Postives = 61/125 (48.80%), Query Frame = 1
Query: 1825 DVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLP 2199
DV RG+ LH + LHG LK NIL+FDN+R ++D+GL AK S+ T A+G+ G +W APE+ G HT +D+FS +++ELL+ +P
Sbjct: 1 DVTRGVAFLHASKVLHGDLKSPNILIFDNMRAKLTDFGL--AKVTSAASTCATAAGA-------------------------ASPKGTWAWMAPEIGA-GARHTAAADVFSGAMVMFELLSGRVP 97
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: A0A6H5L5H1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H1_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 2.610e-8 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 1807 KAAMAFDVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLPNA 2205
KAAM +DVARG+ LH +HG LK N+LVF+N RL VSD+GL+ + S GG G +W APEV LD + + SD++S+G +++E+LT+ +P A
Sbjct: 447 KAAMLYDVARGLHFLHVKRMVHGNLKSTNVLVFENNRLKVSDFGLIALRESQSVV-------------GGGMV-------------------GSVAWTAPEV-LDDQNPSVLSDVYSFGVLVHEVLTQRVPFA 546
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: D7FM46_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM46_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 3.050e-8 Identity = 46/133 (34.59%), Postives = 67/133 (50.38%), Query Frame = 1
Query: 1807 KAAMAFDVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLPNA 2205
KAAM +DVARG+ LH +HG LK N+LVF+N RL VSD+G++ + S GG G +W APEV LD + + SD++S+G +++E+LT+ +P A
Sbjct: 238 KAAMLYDVARGLHFLHVKRMVHGNLKSTNVLVFENNRLKVSDFGMIALRESQS--------------LGGGDTV------------------GSAAWTAPEV-LDDQNPSVLSDVYSFGILVHEVLTQRVPFA 337
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: A2DAP2_TRIVA (TKL family protein kinase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DAP2_TRIVA) HSP 1 Score: 70.1 bits (170), Expect = 5.590e-8 Identity = 41/142 (28.87%), Postives = 67/142 (47.18%), Query Frame = 1
Query: 1792 LSAGLKAAMAFDVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLPNAPMSP 2217
L+ +++ +A D+ARG+ +LH G +H +K NIL+ +N R + D+G + +KN ++P T + G W APEV L + K D++SY +L+ELLT P + M+P
Sbjct: 297 LTPTIRSLIALDIARGLEYLHSKGVIHRDMKSLNILIDNNYRARICDFGFVRSKNQATPMTGL---------------------------------IGTAHWMAPEVLLSSPNYDEKVDVYSYAILLWELLTNEPPFSGMNP 405
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: UPI001C348480 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C348480) HSP 1 Score: 65.9 bits (159), Expect = 6.730e-7 Identity = 48/130 (36.92%), Postives = 59/130 (45.38%), Query Frame = 1
Query: 1816 MAFDVARGMLHLHENG--FLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLP 2199
MA DVARGM +LH +H LK N+LV N + V D+GL KN T++ A G W APEV L E KSD+FSYG IL+EL+TES+P
Sbjct: 321 MALDVARGMNYLHRRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKN----STFLTARSGR----------------------------GTPQWMAPEV-LRNEPSNEKSDVFSYGVILWELMTESIP 417
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: M0ZTM4_SOLTU (Map3k delta-1 protein kinase n=4 Tax=Solanum TaxID=4107 RepID=M0ZTM4_SOLTU) HSP 1 Score: 66.2 bits (160), Expect = 6.800e-7 Identity = 49/146 (33.56%), Postives = 67/146 (45.89%), Query Frame = 1
Query: 1786 PHLSAGLKAAMAFDVARGMLHLHENG--FLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLPNAPMSP 2217
P L + MA DVARGM +LH +H LK N+LV + + V D+GL K+ T++ A+ G W APEV L E T KSD+FS+G IL+EL+TES+P ++P
Sbjct: 481 PPLDLKRRLRMALDVARGMCYLHRRNPPIVHRDLKSSNLLVDKSWTVKVGDFGLSKLKHA----TFLTANSGR----------------------------GTPQWMAPEV-LRNEPSTEKSDVFSFGVILWELMTESIPWKDLNP 593
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: A0A4S8LI49_DENBC (Kinase-like protein (Fragment) n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8LI49_DENBC) HSP 1 Score: 65.1 bits (157), Expect = 8.310e-7 Identity = 37/128 (28.91%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 1816 MAFDVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLP 2199
+++D+A G+L+LHE +HG LK +N+L+ R ++D+GL N S + + ++G GGS W APE ++G T SD++++GG+ YE+ T +P
Sbjct: 233 LSYDIACGLLYLHEKKVIHGDLKAENVLITPTGRAAIADFGLSRVAN--SEALNWSSLSTSNQGRGGSAR-----------------------WLAPECLIEGNNVTYASDVYAFGGVCYEVFTGLIP 335
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Match: A0A7I8KY89_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KY89_SPIIN) HSP 1 Score: 64.7 bits (156), Expect = 8.580e-7 Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = 1
Query: 1786 PH-LSAGLKAAMAFDVARGMLHLHENGFLHGALKPKNILVFDNLRLMVSDYGLLPAKNISSPPTYIDASGSHHRGWGGSXXXXXXXXXXXXXXXXXXXXXGEDSWAAPEVALDGEEHTPKSDLFSYGGILYELLTESLPNAPMSP 2217
PH L L ++ D+ARGM +LH G LH LK +N+L+ +++ + V+D+G+ + +++ +G+ G+ W APE+ + G+ HT K D++S+G +L+ELLT P + M+P
Sbjct: 151 PHSLPLKLVVKLSLDIARGMSYLHSQGILHRDLKSENLLLAEDMSVKVADFGI----------SCLESQCGDAKGFTGTYR-----------------------WMAPEM-IKGKHHTRKVDVYSFGIVLWELLTALTPFSDMTP 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.105.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig135.105.4 >prot_P-littoralis_Contig135.105.4 ID=prot_P-littoralis_Contig135.105.4|Name=mRNA_P-littoralis_Contig135.105.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2110bp MAGVSPSGDSIAATSSTRGSSGGSRNGAGAFMQSESCERPIGLNIVAVVGback to top mRNA from alignment at P-littoralis_Contig135:396723..436432+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig135.105.4 ID=mRNA_P-littoralis_Contig135.105.4|Name=mRNA_P-littoralis_Contig135.105.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=39710bp|location=Sequence derived from alignment at P-littoralis_Contig135:396723..436432+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig135:396723..436432+ >mRNA_P-littoralis_Contig135.105.4 ID=mRNA_P-littoralis_Contig135.105.4|Name=mRNA_P-littoralis_Contig135.105.4|organism=Pylaiella littoralis U1_48|type=CDS|length=6330bp|location=Sequence derived from alignment at P-littoralis_Contig135:396723..436432+ (Pylaiella littoralis U1_48)back to top |