prot_P-littoralis_Contig135.88.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig135.88.1
Unique Nameprot_P-littoralis_Contig135.88.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length812
Homology
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 1.250e-22
Identity = 76/93 (81.72%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   59 MRTDRGSPPLSTASTSXXXXXXXXXXXXXXSRS------SFTPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALR 145
            MRTDR SP LSTASTS   XXXXXXXXXXX         S  PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSA DNNLMVWTFRAQLRALR
Sbjct:    1 MRTDRSSPQLSTASTSRSTXXXXXXXXXXXXXXXXXXXXSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 93          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.770e-13
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0
Query:  769 VDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 811
            VDRGALPEALAGTLDHIVGQLDMLTRTVG+LEQRLTLTEDRLQ
Sbjct:  606 VDRGALPEALAGTLDHIVGQLDMLTRTVGLLEQRLTLTEDRLQ 648          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A835Z3N7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.220e-9
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0
Query:  765 GDGGVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQR 812
            G+GGV R  LP  LAGTLDHIVGQLD++TRT+ +LEQRLTL ED+++R
Sbjct:  442 GEGGVSRDELPAVLAGTLDHIVGQLDIVTRTLAILEQRLTLAEDKIER 489          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A3L6VRZ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRZ9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.810e-8
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   95 PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 146
            P+DP L+RTFRG  + V  +SY+P+M+QL S + D  +M+W F+ Q+RA RF
Sbjct:   33 PMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRF 84          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: R1F002_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F002_EMIHU)

HSP 1 Score: 67.0 bits (162), Expect = 3.710e-8
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   95 PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 146
            P+DP LER+FRG    V+ VS+SP MKQLVS   D  +MVW F+ Q+RA RF
Sbjct:    6 PMDPALERSFRGHKDGVSSVSFSPTMKQLVSGGLDGTVMVWNFKMQMRAFRF 57          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A3S0ZAS1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZAS1_ELYCH)

HSP 1 Score: 67.8 bits (164), Expect = 4.240e-8
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   97 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 146
            DP LER FRG    VT V +SP+M QL SS+ DNNLMVW F+A++RA RF
Sbjct:    6 DPSLERHFRGHRDVVTAVDFSPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A7S2CER6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CER6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.790e-8
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  767 GGVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRL 810
            G + R  LPE L  TLDHIVGQLD++TRT+ +LEQR++LTEDRL
Sbjct:   62 GVISRDMLPEVLTATLDHIVGQLDVVTRTMSILEQRVSLTEDRL 105          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A2C9JD71_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JD71_BIOGL)

HSP 1 Score: 66.6 bits (161), Expect = 9.380e-8
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   97 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 146
            DP LER FRG    VT V ++P+M QL SS+ DNNLMVW F+A++RA RF
Sbjct:    6 DPSLERHFRGHRDVVTSVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: UPI000359547A (POC1 centriolar protein homolog A isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359547A)

HSP 1 Score: 66.6 bits (161), Expect = 9.540e-8
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   97 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 146
            DP LER FRG    VT V ++P+M QL SS+ DNNLMVW F+A++RA RF
Sbjct:    6 DPSLERHFRGHRDVVTAVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55          
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: UPI0007B7EE92 (POC1 centriolar protein homolog A-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B7EE92)

HSP 1 Score: 59.7 bits (143), Expect = 1.380e-7
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 0
Query:  773 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 811
            ++P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L+
Sbjct:   27 SVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLK 65          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSH2_ECTSI1.250e-2281.72Lissencephaly protein 1-like n=1 Tax=Ectocarpus si... [more]
A0A6H5KSG1_9PHAE5.770e-1397.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3N7_9STRA5.220e-968.75WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A3L6VRZ9_9STRA1.810e-850.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
R1F002_EMIHU3.710e-857.69Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A3S0ZAS1_ELYCH4.240e-862.00Uncharacterized protein n=1 Tax=Elysia chlorotica ... [more]
A0A7S2CER6_9STRA6.790e-865.91Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A2C9JD71_BIOGL9.380e-860.00Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
UPI000359547A9.540e-860.00POC1 centriolar protein homolog A isoform X1 n=2 T... [more]
UPI0007B7EE921.380e-771.79POC1 centriolar protein homolog A-like n=1 Tax=Sin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 333..347
score: 38.35
coord: 207..221
score: 37.13
coord: 291..305
score: 39.11
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 181..220
e-value: 2.4E-7
score: 40.4
coord: 349..388
e-value: 1.1E-9
score: 48.2
coord: 265..304
e-value: 5.0E-10
score: 49.3
coord: 139..178
e-value: 1.4E-7
score: 41.2
coord: 97..136
e-value: 4.2E-5
score: 33.0
coord: 307..346
e-value: 7.7E-10
score: 48.7
coord: 223..262
e-value: 1.9E-10
score: 50.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 267..304
e-value: 1.4E-6
score: 28.9
coord: 187..220
e-value: 7.2E-7
score: 29.8
coord: 309..346
e-value: 1.1E-7
score: 32.4
coord: 146..177
e-value: 3.7E-7
score: 30.7
coord: 227..262
e-value: 7.1E-9
score: 36.2
coord: 101..135
e-value: 0.016
score: 16.1
coord: 350..387
e-value: 2.8E-6
score: 27.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 314..355
score: 17.827036
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 146..177
score: 15.253835
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 230..271
score: 16.089291
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 272..313
score: 14.05078
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 188..229
score: 15.287253
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 356..387
score: 12.546961
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 104..138
score: 11.64467
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 99..263
e-value: 4.1E-51
score: 175.6
coord: 264..426
e-value: 5.3E-44
score: 152.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..488
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..565
NoneNo IPR availablePANTHERPTHR44019WD REPEAT-CONTAINING PROTEIN 55coord: 771..811
NoneNo IPR availablePANTHERPTHR44019WD REPEAT-CONTAINING PROTEIN 55coord: 97..393
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 771..811
NoneNo IPR availablePANTHERPTHR44019:SF1POC1 CENTRIOLAR PROTEIN HOMOLOG Bcoord: 97..393
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 230..265
score: 12.446495
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 314..351
score: 13.448307
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 188..221
score: 12.103769
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 356..387
score: 10.442869
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 146..177
score: 12.578312
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 272..307
score: 11.022865
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 104..138
score: 9.731054
NoneNo IPR availableCDDcd00200WD40coord: 100..388
e-value: 4.34298E-89
score: 281.146
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 333..347
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 291..305
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 249..263
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 96..387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig135contigP-littoralis_Contig135:360298..371851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig135.88.1mRNA_P-littoralis_Contig135.88.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig135 360298..371856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig135.88.1 ID=prot_P-littoralis_Contig135.88.1|Name=mRNA_P-littoralis_Contig135.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=812bp
MSQSLPRTEQARRHSAVLPSRCAACETMAFRSSDFGVGTSSSFIGRRSHR
RIAGLDQTMRTDRGSPPLSTASTSRSAAAAAATAAAKASRSSFTPVDPEL
ERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRFKGHT
ATVHHAEFSPDGSLVASASKDRTVRLWTPSARGGSSVLKGHMGGVRHASF
SRNGRLLITASEDKTVKIWSLPSQRFVCTLNGHNNWVRCATFSPDSRLAT
SCGDDKTVRLWDVQTQDCLRAFFDHDGSVGQARFHPDGTCLAACSEDRTI
KVWDARSHQLLQHYPAHDGEVTSISFHESGNFLLSSSTDASVKIWDLREG
RLVYTLKGHSGPVSACAFSADGTRFASGGEDGLVMSWRSHLDNRLAGGDS
GGGGAARGSMALGAAACDDRIMSMNDGAAVAAAAAAVRGGGSGEGMVTAP
GRQRLQQQQQRTALGVRTTNARTSTPGRSGIARQPGAFSSSSSIEGVAAA
RRHGYSARKGGISIGGGGGGDGGSYLRTTNASLGPSPGQSRDADQYDHQQ
RPRWTAPENRRGNEGYRASEGAQPSPRRQQRQHRQRHFSVEDLEGDVEED
GGDGGGGGGSVERESTTVAATRARSASQMDRENNAAVAAAAAAPALRTAA
AGWFAGGEDDDVPVYRGSSDWRDFTTAGVGGVAGAAVAGRESPGATATRT
FIADAATIGNAAAAFGGGEGALAGGSGAGGGRGNEGTAARGRGGMYGGSG
GVSGGGAGASRFKTGDGGVDRGALPEALAGTLDHIVGQLDMLTRTVGVLE
QRLTLTEDRLQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf