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Homology
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: D8LSH2_ECTSI (Lissencephaly protein 1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH2_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.260e-22 Identity = 76/93 (81.72%), Postives = 76/93 (81.72%), Query Frame = 3
Query: 180 MRTDRGSPPLSTASTSXXXXXXXXXXXXXXSRS------SFTPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALR 440
MRTDR SP LSTASTS XXXXXXXXXXX S PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSA DNNLMVWTFRAQLRALR
Sbjct: 1 MRTDRSSPQLSTASTSRSTXXXXXXXXXXXXXXXXXXXXSIFPVDPELERTFRGRGAAVTGVSYSPDMKQLVSSATDNNLMVWTFRAQLRALR 93
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A6H5KSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG1_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 5.780e-13 Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 3
Query: 2310 VDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 2438
VDRGALPEALAGTLDHIVGQLDMLTRTVG+LEQRLTLTEDRLQ
Sbjct: 606 VDRGALPEALAGTLDHIVGQLDMLTRTVGLLEQRLTLTEDRLQ 648
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A835Z3N7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 5.230e-9 Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 3
Query: 2298 GDGGVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQR 2441
G+GGV R LP LAGTLDHIVGQLD++TRT+ +LEQRLTL ED+++R
Sbjct: 442 GEGGVSRDELPAVLAGTLDHIVGQLDIVTRTLAILEQRLTLAEDKIER 489
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A3L6VRZ9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VRZ9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.810e-8 Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 3
Query: 288 PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 443
P+DP L+RTFRG + V +SY+P+M+QL S + D +M+W F+ Q+RA RF
Sbjct: 33 PMDPSLQRTFRGHKSGVECLSYNPNMRQLASGSLDCTVMIWNFKPQMRAFRF 84
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: R1F002_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F002_EMIHU) HSP 1 Score: 67.0 bits (162), Expect = 3.720e-8 Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 3
Query: 288 PVDPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 443
P+DP LER+FRG V+ VS+SP MKQLVS D +MVW F+ Q+RA RF
Sbjct: 6 PMDPALERSFRGHKDGVSSVSFSPTMKQLVSGGLDGTVMVWNFKMQMRAFRF 57
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A3S0ZAS1_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S0ZAS1_ELYCH) HSP 1 Score: 67.8 bits (164), Expect = 4.250e-8 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query: 294 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 443
DP LER FRG VT V +SP+M QL SS+ DNNLMVW F+A++RA RF
Sbjct: 6 DPSLERHFRGHRDVVTAVDFSPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A7S2CER6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CER6_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 6.800e-8 Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 3
Query: 2304 GGVDRGALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRL 2435
G + R LPE L TLDHIVGQLD++TRT+ +LEQR++LTEDRL
Sbjct: 62 GVISRDMLPEVLTATLDHIVGQLDVVTRTMSILEQRVSLTEDRL 105
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: A0A2C9JD71_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JD71_BIOGL) HSP 1 Score: 66.6 bits (161), Expect = 9.400e-8 Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query: 294 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 443
DP LER FRG VT V ++P+M QL SS+ DNNLMVW F+A++RA RF
Sbjct: 6 DPSLERHFRGHRDVVTSVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: UPI000359547A (POC1 centriolar protein homolog A isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI000359547A) HSP 1 Score: 66.6 bits (161), Expect = 9.560e-8 Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query: 294 DPELERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRF 443
DP LER FRG VT V ++P+M QL SS+ DNNLMVW F+A++RA RF
Sbjct: 6 DPSLERHFRGHRDVVTAVDFNPNMTQLASSSLDNNLMVWNFKAKMRAYRF 55
BLAST of mRNA_P-littoralis_Contig135.88.1 vs. uniprot
Match: UPI0007B7EE92 (POC1 centriolar protein homolog A-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B7EE92) HSP 1 Score: 59.7 bits (143), Expect = 1.380e-7 Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 3
Query: 2322 ALPEALAGTLDHIVGQLDMLTRTVGVLEQRLTLTEDRLQ 2438
++P ALA TL HIVGQLD+LT+TV +LEQRLTLTED+L+
Sbjct: 27 SVPAALASTLQHIVGQLDVLTQTVAILEQRLTLTEDKLK 65
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D8LSH2 |
| Preferred name | POC1A |
| PFAMs | WD40 |
| Model size | 2441 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K16482 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000226,GO:0000278,GO:0000922,GO:0001501,GO:0002062,GO:0002063,GO:0003413,GO:0003416,GO:0003417,GO:0003418,GO:0003431,GO:0003433,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005819,GO:0005856,GO:0005929,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007098,GO:0007275,GO:0007276,GO:0007283,GO:0008150,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010564,GO:0010638,GO:0010824,GO:0010825,GO:0015630,GO:0016043,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0031023,GO:0032501,GO:0032502,GO:0032504,GO:0032886,GO:0033043,GO:0035265,GO:0036064,GO:0040007,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045787,GO:0046605,GO:0046607,GO:0048232,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048589,GO:0048609,GO:0048705,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051216,GO:0051493,GO:0051495,GO:0051704,GO:0051726,GO:0060271,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0061448,GO:0065007,GO:0070507,GO:0070925,GO:0071840,GO:0090068,GO:0098868,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902850,GO:1903047,GO:1905515 |
| Exons | 9 |
| Evalue | 2.05e-23 |
| EggNOG OGs | 2CMZ3@1|root,2QSVJ@2759|Eukaryota |
| Description | growth plate cartilage chondrocyte development |
| Cds size | 2436 |
| COG category | S |
| BRITE | ko00000,ko03036 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789623.1286118-CDS-P-littoralis_Contig135:360297..360525 | 1680789623.1286118-CDS-P-littoralis_Contig135:360297..360525 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 360298..360525 - |
| 1680789623.1396554-CDS-P-littoralis_Contig135:360636..361429 | 1680789623.1396554-CDS-P-littoralis_Contig135:360636..361429 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 360637..361429 - |
| 1680789623.1481364-CDS-P-littoralis_Contig135:361773..362159 | 1680789623.1481364-CDS-P-littoralis_Contig135:361773..362159 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 361774..362159 - |
| 1680789623.156747-CDS-P-littoralis_Contig135:363306..363432 | 1680789623.156747-CDS-P-littoralis_Contig135:363306..363432 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 363307..363432 - |
| 1680789623.1658645-CDS-P-littoralis_Contig135:363952..364127 | 1680789623.1658645-CDS-P-littoralis_Contig135:363952..364127 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 363953..364127 - |
| 1680789623.1774585-CDS-P-littoralis_Contig135:364691..364768 | 1680789623.1774585-CDS-P-littoralis_Contig135:364691..364768 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 364692..364768 - |
| 1680789623.1873443-CDS-P-littoralis_Contig135:366401..366626 | 1680789623.1873443-CDS-P-littoralis_Contig135:366401..366626 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 366402..366626 - |
| 1680789623.1983607-CDS-P-littoralis_Contig135:367701..367940 | 1680789623.1983607-CDS-P-littoralis_Contig135:367701..367940 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 367702..367940 - |
| 1680789623.2089286-CDS-P-littoralis_Contig135:371664..371851 | 1680789623.2089286-CDS-P-littoralis_Contig135:371664..371851 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig135 371665..371851 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789623.2233562-UTR-P-littoralis_Contig135:371851..371856 | 1680789623.2233562-UTR-P-littoralis_Contig135:371851..371856 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig135 371852..371856 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig135.88.1 >prot_P-littoralis_Contig135.88.1 ID=prot_P-littoralis_Contig135.88.1|Name=mRNA_P-littoralis_Contig135.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=812bp
MSQSLPRTEQARRHSAVLPSRCAACETMAFRSSDFGVGTSSSFIGRRSHR RIAGLDQTMRTDRGSPPLSTASTSRSAAAAAATAAAKASRSSFTPVDPEL ERTFRGRGAAVTGVSYSPDMKQLVSSAADNNLMVWTFRAQLRALRFKGHT ATVHHAEFSPDGSLVASASKDRTVRLWTPSARGGSSVLKGHMGGVRHASF SRNGRLLITASEDKTVKIWSLPSQRFVCTLNGHNNWVRCATFSPDSRLAT SCGDDKTVRLWDVQTQDCLRAFFDHDGSVGQARFHPDGTCLAACSEDRTI KVWDARSHQLLQHYPAHDGEVTSISFHESGNFLLSSSTDASVKIWDLREG RLVYTLKGHSGPVSACAFSADGTRFASGGEDGLVMSWRSHLDNRLAGGDS GGGGAARGSMALGAAACDDRIMSMNDGAAVAAAAAAVRGGGSGEGMVTAP GRQRLQQQQQRTALGVRTTNARTSTPGRSGIARQPGAFSSSSSIEGVAAA RRHGYSARKGGISIGGGGGGDGGSYLRTTNASLGPSPGQSRDADQYDHQQ RPRWTAPENRRGNEGYRASEGAQPSPRRQQRQHRQRHFSVEDLEGDVEED GGDGGGGGGSVERESTTVAATRARSASQMDRENNAAVAAAAAAPALRTAA AGWFAGGEDDDVPVYRGSSDWRDFTTAGVGGVAGAAVAGRESPGATATRT FIADAATIGNAAAAFGGGEGALAGGSGAGGGRGNEGTAARGRGGMYGGSG GVSGGGAGASRFKTGDGGVDRGALPEALAGTLDHIVGQLDMLTRTVGVLE QRLTLTEDRLQR back to topmRNA from alignment at P-littoralis_Contig135:360298..371856- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig135.88.1 ID=mRNA_P-littoralis_Contig135.88.1|Name=mRNA_P-littoralis_Contig135.88.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11559bp|location=Sequence derived from alignment at P-littoralis_Contig135:360298..371856- (Pylaiella littoralis U1_48) AATAGATGTCACAGTCTTTGCCTCGGACCGAGCAAGCGAGACGACACAGT
GCGGTGTTGCCGTCGAGGTGTGCAGCGTGCGAGACCATGGCATTCAGATC
ATCGGACTTTGGAGTCGGGACTAGCAGCAGCTTCATCGGGAGAAGAAGCC
ATCGACGCATCGCAGGGCTGGACCAAACGATGCGGACGGATCGTGAGTTT
AGTTCCAACTTCAGAAAACGTGTTCTGTCGTGTGTGATATCATACCTGCT
GTTGTGTACAGCGGTAAGTCGTGCCAAGCATCTACAAGAGTGGACAAAAC
AAACATCCGTGGGGAAGAGCGCTGCTGTTACGGCAGCGGCCCAGTTGGGT
GGGCCCCATCATGTTTCCTGGTAGCGAGAGGATCTTCATGATCGTGCTTG
GCCTTGTTCTGACCAGGATGGGACATCTGTTGTTGTGCATGCTTTGGCAG
AGAACCGCTTGTTCGCGAGAGTTTGAAATTTACGTCCTCGTCTTGAAAAA
CTGACGGTTTGGTTATTATCGAAACTGCAAGTACCGGTTCTCTGTATAAA
TGATTTGATACAGCAGTCAAATACTGCTGCCTCAAAAACTTCTTGATACC
GCTGGTATCTGGAGCTGGAAATATCATGCACCTTGTTCGATGAGCTTGAG
AAATATTGGTTACTGCTGTATAACCAATATTAAATCTAGGGAGTATCATA
CGTAGCTCATTGCAAAGCGTACTGAAAGTCGAAACCGTCAACAAAGCGCT
TGCATGAGGCCGTTTCTTACGGCTCCGTTATTTGGTCCTTCGTTTTTTCT
CCTGAGGTACCCCCCCCCCCCATTACAGAGCCCAAACGGTTGAAAAATCT
ACTTCTTGAGCACAACAGGAGACAGCACCAAGCAGATCTCGACCCCTGGG
ACACCAATCGAGACTATAGCTGTTGGACGGTGCGCTCTAGTGTTCTCAGG
TTGGCCACAGGAAATTTGATGAGTGTGGGCTTTCGCTGTGGCGAGGCTTC
GGCGGCGGAGTGGGGTTGAGGTTGGAAACTCCGATCGAACAAAAAAAACG
CTGTCCGAGCCTGTTTTTTGGCCGGAAAAACAGGAGCGAAGTCTGTTATT
TCGTTTCATCTGTTTTTCATCTCCAACACACACCACCGCCAAAACCTCGC
TCAGCTCGAACCCACTGCCACCTAACTTCCTGTGGCCAACTTGAGTACGT
AGGAGCACACGCTCCATCAGGTTTGATCGTCCTAGGGTCGAGTTCTGGTT
GGTGCTGTCGCATGATGTGTGCAACAGGGTTGTTTGCGGGTGGGGGGGAG
TAGAGGGGTTCTCTAGTTGGATTCTTGTAGGGGGTCAAAAGGCCAGGCCA
AAATGACGTTGACCGTAAGAAACAGCCTGATAAAATAAACCAAAGCGAAA
AGAAAACACATTCGAAGTCAGCACACAGCAGATCTTCGTATACAGCAGTA
GTACAAACCTGCCCGCAAGGAAGAAACTGAGTATCGGCCTGAGGCTGGAT
CTCTTGTTTTGTGACCACCACGAGAGCACGCCATTTCTTATCTACGAAGT
ACGAAGTAGGATTTAGCGTGGGGCCGGCCCCTGGGCCAGTTTTCTTACGC
CAAATTTCTCAAGGCGTACGTGGTGCCGAAGGCAGTGTGATGGTTTTCCA
TCGAAAAGCACGTCGCAGGCGGGAATTTTTTTGAGCGTTACCATCACATG
GATGGGATGAGATTCACTCTGTCGTTGATGGGATGGATATGGGATGGTAA
AATATGGCCAAATGTGTTGATGGCATGGGATGGTAATGTGCGCCAGTTGC
TGATGGGATGGGATGGTAATTGTTGGTGGTACATGATGAGATGGTAAAAT
CATAGATGGTGATGGTGTGATGGTAAAAATCCATTACCTTGGTGATGGTA
TTACCATCATCATGGATTCGGGGGAATGATGGGAAAACTCAACTGCATGT
AGGAAAATTATCATTATTCCATGGTAAAGCAGTGACCGTTCCACTTGTTT
ATCGGTAGTGTAGTGTCCGCAACACACGCCGCAATCTAGCGCCGACGCTG
GTTCGGTATGTGTACAAGTAGTAATAGTGTGCATGATCATCATACTGCTG
TACTTCGTATATAATATCGTGATATCATACGTGTGTATTGTCATCCCATC
TATTCTAGACGCCAGTTTACACCTTTGAGTACACTACGTGGGCGCACATC
ACTTGGGGTCACAGGAGGAAGGTTGACACAGCAGGCATGATATTTATTTT
ACATGATGTTGTTCGTTCAAGAATTTACTGACTGTTATCACGAGTTTTTA
GTTTAAAAACAAAATCTATGACATCGCTTGCACTCACAGCACATTTGCTC
GTTCAGATTCGGACTTGACTTCAAACAACGACACGATATAGATCGTCTTT
GCTTATTTTTATTCCAGACAGACAAACACAAAATACGGGGAAAAAACAAA
GAAAATGACGAGAAGGTTCCTGTGTTCCACCTGAGCTGCTGCTGGTGGTG
TCATCTGATAAAGGCGCTGGGGGTGCTGCGGCCGGTGTGCCGCCTGGGGG
TAGGAGCGGACATCATACAAGAAAGAAAAAAAATCACCCCCCCCCCAAGG
TTCTACATTTGGTTTTATGCACAGAGTATTTCTCTGCAGAAAATATTAAA
CGCAGGGGTATATCATCGGGGTATACTTGCTGGGAAAATGTGAAACGTGG
GAAAATGATTGTTGTATGATGGTATCGGCGGTGGGTGTCGCAGAGTTCAG
TGGGATGGTAGAAAGTTCATGTTTTGGGTTGTGGGTGGGATGGGAGGTAA
CTCCGGGTCCTGGGATGTGAAAGCCGATGGGATGGGAGATGCAGATACAC
CAGCGGATGGGAATTGATGGGTTCGACAAATCGGTGGGATTGTGATGGAA
TGTTAATTGTGATGGGAAATAAATTCCTCGGCCCATCCCATCATTTTACC
ATCCCATCCCATCGTTGATGGCGTCGTTGACGGTATTTACAACCAATTTC
ATTACCACGTACGACCTTGGAATTTCTTAATTTTTCAAAATCTCAGCCTG
ATTTTCTTGCTAGTGCATTTCCTTTGCGGGCCGGTACTGCTGTATACTCC
GCATCTTCTTCCATTGTTTCGTGTTTTGTCCTACAGTAGACAGCGCCCAG
AATCGTCGTCTCCTGGAGGTCAATCATTGGCGTAGTATGGAGCTATGCCG
AGCATGAGTGGAGAACTAACGGGCTCAGCGTGTATTATTGATGTCTTCAT
GCACGAACTTGTTTGTACACATACAGAAATTCAGCAGTGCAGCAGTAGTA
GGCGGCCCGATGTGAGGACACCTATTGTCAGGAGGGCAAATTGTTCTTAT
TCAGGGAGGTGTCCTTATCCTTCAATGGGGACAATGTCCTCATTGCTCAA
TGGTGACATTCTGTCCTTATTGAAGATGAAAGTCAACCATATGATGAACT
CAAGTACATTGGTGGCGGCAACTTGGTGGAGAGTTGTCTGTTGAACAGGC
GGGGGCTCCGTGAGAGCAGTACAATGCACCCCGACATAGGGACAACTTGT
CCTCATATCGACTCGATATAAGGACAAGTTGTTCCTATATCGGGGTGCGT
TGGTGTCGAGCAATTTTCGTGTTCTGAAAGAGGGAAAATCCTTATTGAGT
TTGCCCTAGTACTGCGTGTAGGATACAGCGTAGTCACGCTGCTGTTGTCA
ATGCTTTGAAGTTGATGTGTGCAAATCGCAGGTAAAACGTACTTCGTGCA
AGCCGTATAAGCCAGGCACGTACCGTCAATACATCAAAGAGACACAGGCG
TGCTCTCCCCGTTCGATTGCGCCATGGCTACATGCCAAACCAACCCAACC
CGACGGCCGCTACCGCACCCAAAAAATACAACGTCAAACGGTGTGCCCAT
ATGGAACACCTGGCAGGCGGTTCCCCTCCTCTATCCACCGCGAGCACGAG
CCGAAGCGCCGCCGCCGCCGCCGCTACCGCCGCCGCCAAAGCCTCGCGCT
CCTCCTTCACGCCTGTGGATCCGGAGCTGGAGCGGACTTTTCGGGGGCGC
GGGGCGGCGGTAACCGGCGTCTCGTACTCCCCAGACATGAAGCAGCTCGT
GTCCTCGGCGGCCGACAACAACCTCATGGTCTGGACGTTCCGGGCGCAGC
TGAGGGTGAGAAATTACGTACACCGCTGACAGCAGCAGTAGTAGTAGTAG
TTGTCCCTGCCCTTTATAGGACACCCTCATGTGAGGGACCCCCCCCCCCC
ACCCCCTCCTGAGCCGCTTCAACGACACGACTTTTTTCGCCAAAGCCAAC
ATGACCCGCGGAATATACACGTTGTATGTGTATGATTTCATACGATGTTG
ACGATGGAATTCATTGAATATTGCGCTTGCCAGGAAAGGGAACTTTTTCC
GGCCCGTGCCCGGGGGTGCCCTACGAGCGGGGTCGACTGTCGGATGCGTG
CGTGCGTATCACATGATATGCGCGTGGTATGCATGATATAACAATATTTA
GCCAGCGAGGTAAGGCAGGAAGGGAAGGGGGCGGCGTACAAAAGTGCTCT
TACTCCTTTGACCGTTATATCTCTTTCTGCGCACTGCTGATTTCGGTACT
CCGTATTGTGAAGTATGGTTTCATATCATACCGCTCCGACTTATCGTACA
TGGGTCTACTACGGCTTGCTGCATGCGCCATAAAGCTCTCATTAAAAACT
GTTTGTGCCAGCACCAAACGAGTGTATCAGGATTTCGTGCCTGCCGTTTA
GGTGGATTGGCCGTATGATGGCACACCTGTGTTTGGTGAAGCCCGGGATC
CGGGATAAAAGGAGCACGTTGTCGGGTTTTGCGCCGACCAGGCAGGGATG
AAGAGGGAGGGGGGGGGGGGGAGGGTTCAAGAGGAATTCCAGCAATTTTG
GCCTGCCATTGGTGATTGCAAGAGCGTCAAACGGTTGTGTCACAGTAGTG
TTTCGCTCGTGCACCCCCCGGCGTCTCTCCTCTGGACAACCTACGCGAGT
ACTGAACAGAGCCCTCTTGAAGAGGTGTGTTACATCTCTCTCTTTACTTT
TACGCTCTACACGTCATACATACCGAAGCAAACCAAGCCCGACGAAGGCA
ACCGTACCCAACACCTACACCTACACCTACATCAATACCGAACCCCAACA
CCAAATACCAAACCGCTGCCGCTGCCGCTGCCGCTGCCGCCGCTGAAAAA
ATGCCTGAAAAAATTCTTCCCTTTTTGAAGGCCCTGAGGTTCAAGGGCCA
CACCGCTACCGTCCACCACGCCGAGTTTTCGCCAGATGGGTCTCTAGTAG
CCTCCGCGTCGAAAGACCGCACGGTGAGGCTGTGGACGCCCTCGGCTAGG
GGCGGGTCGAGCGTCCTGAAGGGGCACATGGGGGGCGTGCGGCACGCGTC
GTTCTCGAGGAACGGGCGGCTTCTGATCACCGCCTCGGAAGACAAGACTG
TCAAGGTGATATGATGAGTGTTGTACCGGGCATGCGTGTTTGTTTGTTTG
TTGTTGTTGTTGTTGTTGTTGTTCGTGTTCTTGTTGTCGATGTCGTTGTT
GTCGTTGTTGTCGTTGTTGTTGATGTTTTTGATGTCCTCACGTTTGGTCA
CCGCTAAAGTCCAGCGCGTGGTCACAAACCAGGCATACCTCGCGCTAGGG
AGGAAATTAAAAAACAAAATAAAATTGGATTGAAAGAAGGCCATACTTAC
ATAGGTGTATACAGTATCTCCTGTAGGCCAAAATAAAAAAATACAGACAT
ATAGACTTGAAGGTATTGAGAAAGCAAACGAAAGCGAAATGCCCAGGAAG
GAGGTAGCAGTCCGTGAATAAGCGAAGACGACACAGCAGTAGAGAGGAAC
AAAGATACGGAAGAAAAATATCGAAAGAGGAATGGAGAAAAAAGGGGGAA
AATGAAGGTAGTACAAGAGAAAGGGGAATAGGTGCTTGGTTGTACACACG
ATCAGTCGTAAAGATGACTCGCCGCAAGGTTTTCCTGCTCACGCTTGCTC
TCGTCCCACGCACTCTTGCCTCCTGTTACTCCTACTACCACCGCACACTG
TTACCTCTGCCCTACCGGTCCTCTACATATCTAGCAGCAACAAACCACCC
CGCGACTTCTGCCTTACAGTTTATTTTACTCCTACCATCCCGCAGCTTGG
TTGCTTATTCTGTCTTGAAACTTTGCGTGTAAGTATGATATGTACGGAGT
ATATACGAAAAGTAATGTATGCATGTATGTCTGTAGTACCGGTATGTGTG
TAAATGTACCTGTGTACCGGTGTATGTACACGTTCAATGTAAACACGGCT
TGAAGGGACGGGGTGAATTACCCCCTCCCCCGCCCCCCCTTCCGCTTTTT
TATTTTCGTAGACAGTTGGCTACGCGAGGTTACACAATAGTATGATATGT
CCAAACATACACCAGGTACACCGTTAGGAATTGGTTTTAAGCCCCCCCCC
CCCCCTCGTGGGTGACTCGTGAGTACATTTCTAGACATGGTGGTGCACTG
CCGTTGTGTATGCATGCGATAAGCATGAGCTTTTCGTGCTATTTTTTGGC
CCACACACGCCCTACTGCTGTAGCCGGCAGGAGGTCTCTCGCCGAAATGG
CGCCGCCGCCTCCCACCACTCGATTTGCACCGCCGCTCGGCGTGATGTTA
TCCTCGACGTGTTTGGGGAAAGGAATGACAGGCCGGGCGGGTCCTTTTAC
TTTGGGTGAATGAGATGTGGCAAAATCTTTAATCACACGTGCCCTCTCTT
ACGCAACCAAACTATAATACTTCGAAGTATGATACAGCAGAACAGCACAG
TACAGTACAGCACAATACAACAAACAACGACACGACACAATATAATACGA
AACAAAACAAAACAAAACAGTACAAAACAAAACAATTAAAAACACGGCTG
CTGTTGCTGCTGCTGCTATGTTCCCTGATGTCTCAAAACAAAATCAATCC
GTATCAGAGATATTTTTGGAACTCAAAAGAACTTCGCCCCCCCCCGCCTC
CCCCGCGCAGCTACAAGTGTAGGGATTATTTTCGGTGGGATCGATCCTTC
TGCCTTGTTGTTGTTGATGTTGTCGTCACGTCCTTCAGATCTGGTCGCTG
CCCTCGCAGAGATTCGTCTGCACCCTCAACGGACACAATAACTGGGTCCG
CTGCGCTACGTTTAGGTATGCATGCGTCTATGAAGGCGGGCCGCGTCTCT
TTCTGTTGGTAGTGTGCAGTTGCTCGTTTTGGGGCTTTTGGCTCTCGGAT
TCGTCGTGGTTTGAGGTCGGCTGAACTGTTTTGTTTTGTGTTTGGGCAGT
TGGGGCGGGAGTGCATACATTCATGCCCGGAGACTGCAGCCGGAAGAAAC
GACGGCATCCACGATGGCTTGCGTGCTGCAAGCGGGAACGGTTTGAAAGC
TTTTTGTTTTCGGGCGGTACCCAATGAAGTAGTACATAAAAAAGAATGTT
GTCATGTTTTTTGTTCTCGCCTCGTGAAGCGGAGTACCGTGTTTGCTGTT
CCTCCGACCTGCCACCTCCAGTCTGCCACGCAGCGCCTGGAACGCTTCTC
ACCCATGACGTGCGTACGGATCAATGTTCTTGTCATGGTCGCAACCAATT
ATCATGCGTGGTTGTATGATATGATACCACACACGCATGTACACATGTGA
TACCTCGAAGTATGTGTGATACAAGTGTATGGTATCATGTTCACTTTTTA
TTTTATTTTTTTGTGATGTGAATTTGCAGCCCCGACTCTCGGCTGGCCAC
CTCCTGCGGGGACGACAAGACGGTGCGGCTGTGGGACGTGCAGACCCAGG
ACTGCCTGAGAGCCTTCTTCGACCACGACGGGTCCGTGGGGCAGGCGCGC
TTCCACCCGGACGGAACTTGCCTGGCGGCGTGCTCGGAGGACCGAACCAT
CAAGGTAAGGTATCTGCCATGACGAGGATGACATCATGGGGTTGATATCA
TATGACTGAATGTATTCCATGGTCTCTGTGTGTCGTGGAGTAGAGGTAGC
TTTCATCCAGGTGTGTACTGTGCAAGTAGAGCTCTGTTTTGTGTTCTATC
TGAGGGGCCGGCCGCAGAAGCATGGCCGTGACTTTGTTGGTTAGCCGATC
ATGGGCAGCTATGTATGCTTGTGCGTGCGTGTGGTTGGCTCTATTGATGC
CATTCGATTTCGATGACAACTGGGAGGACCTACACCACGTCGAGGTGTGC
GTGTGCGTGTGCGTGTGCGTGTGTGCGTGTGTGTGTGTTTCGCTTCGTAC
TTGTTTATTTGGAGTCAACACTTTCACTGGCTGCTGTCAGAATTTTCCAC
ACGAAATCTCGGCGAACTGCCCGAAATGGTCAAAGGCGTGATTGTTTACT
TGTTTTGCAAATGGTATCGTACATACCGCACGTACATGATACTAAGTACG
TTTTTACCTTCTGCGGCACGCCAGGTGTGGGATGCACGTTCCCACCAGCT
GCTCCAGCACTACCCCGCCCACGACGGCGAGGTGACATCGATAAGCTTCC
ACGAGTCGGGAAATTTCCTTCTGTCGTCGTCCACTGACGCCAGTGTTAAG
GTACGATGACGACGATACAGGGCGCACAAACCATATGTTTCGTTCTTTAA
TATTGCGATATTATTATCCATATTATTATTACTATTTTTGTTATAAAGTT
ACGGATTTTTCGTTGTTATTGTTATTTATTTGCATATTTTACGTTTCTTT
CTTCAGCTTGCGGTTCATTTTTTCCTCGGATAAAAAAAAAACTTTTTTTT
TTTTGCTTAGCAGCTCGAAGATGGCAATGCTGTATCGAAGTCCTTTACCT
GCACTGAAATTGTTATGGTAGCTCCAAGCTCTGGTGTGTTTGGTGTGCGT
CTCGAGTACCTGCTGGTACGGCTGTTGTGAAATGTTTATGTTCGTTGAAG
GAAAACAAAAAAAAGGTGGTCGGATTCTCTTGTAAATCTGTGTGGGTAGC
TAGGATTTTCATGAGTTTATTCGATTTGGGTAGTTAGCCGGTGACCACGG
AAATCCTCCCCCCTTTGAGATGAGTTTCAGCAGTAGCAGAAATAATATTT
TCGTACGGTAATGAGCAGTGACCGGAACAGGTTTGTGATGCTAAAGAGAG
GCCTGCTTTTCACATCGTGCCATCGCCGTTTTTATTTGTATCCAATACAT
GGTACTTCCGTAAAATATACGGAGTACTCCGTACGAAGTAAATTATACTT
CTATCTTTCATGACGTAAACGGTGAATCAAATTGTTTGAACGCAGGACAT
TTTACGCAGGACAGTAAACTTTATTTCAAGCGATAGAGTAAATCGGGCTG
CTCTCCTCAGTGAAAAGCAGCAGCTTTTTTTTTCATTGGGTCCCTTGTCC
CCGAAGGTAAGGTTGTAGTTCTGTGCTCCCAAACGCATTCGCACGACGTT
ATTTGGATGTCGTAGGACCTAAGCAATGCGTTGAGACAACCTTGTTTTTA
GCAGGTGCTGTTCAGGTACTAATACTTCCGTCGATCTTTCTCGCGATGCT
TTTCCTGCCTTTGAGTCAATGGTACGTAGTCTCAATGAAGCCTCTCTTAC
TTTTTTTCGCACCAGCATCCCAAAATCACCGGTATGATTGGAGTTGATGT
CGCCGTCACCCGAAGGTAAGCTCAAGCTTCATGTGAGCACGCATATCACA
GCAATGACCCAAAGCCCTTACTCGTCTCTCGCTCGCCATCGTGGAAGATT
TGGGATCTGCGCGAAGGGCGGCTGGTGTACACCCTCAAGGGTCACTCCGG
CCCCGTGTCTGCGTGCGCCTTCAGCGCCGATGGCACCCGGTTCGCCTCCG
GAGGTGAAGATGGCCTGGTCATGTCTTGGAGGAGCCACCTCGATAATCGC
CTCGCCGGCGGCGACAGTGGGGGTGGTGGCGCCGCCAGAGGTTCGATGGC
GTTGGGGGCGGCGGCATGCGATGACAGAATTATGAGCATGAACGATGGTG
CTGCTGTCGCGGCGGCGGCGGCGGCGGTCCGGGGAGGGGGGTCGGGAGAA
GGCATGGTGACCGCCCCTGGAAGGCAGCGACTGCAGCAGCAGCAGCAGCG
CACTGCGCTCGGCGTTCGGACGACAAATGCGAGGTGAGACTTTGGTTGCC
TGTTGGTTTTTGTCACGGTTGAAGGCGGATGTTCTATTTGATAGGTTGGG
ATGGGTCGATTGGTCGGTCTTGCGTGTGTGTGGCGAGTTGGTTCATTTTT
GGTTGCGGCGTCGTTTAGCACGACGTTGATAGGCACATGTGTAGGATGCG
TTTGCTGAGATTGCTGTTGTTTTTGTGACGCGCTGTGTATGCACATAACA
TATGGTGATGGCAGGTGCTCTTGCTCGCGCTGTTCTACGTACCCGTTTCC
TTGTCCATTCGTGTCACCTCCTCCTCCTCCTCCTCCTCCTCGCCCTCCCT
CCCTCCTCCCGTACCTCTTCACTGCAGGACCTCAACCCCGGGGAGATCCG
GCATCGCACGGCAGCCCGGTGCGTTCTCGTCGTCGTCGTCTATCGAAGGT
GTGGCGGCAGCAAGACGACACGGATATTCAGCGCGAAAGGGCGGCATCAG
CATCGGCGGCGGCGGCGGCGGCGACGGCGGTTCGTACCTTCGGACTACGA
ACGCCTCTCTAGGGCCGTCGCCTGGGCAATCCCGCGATGCAGATCAATAC
GACCACCAGCAGCGACCCCGCTGGACAGCCCCCGAAAACCGGCGGGGGAA
TGAAGGCTACAGAGCTAGCGAGGGAGCGCAGCCTTCCCCTCGGCGGCAGC
AACGGCAGCATCGGCAACGTCACTTTTCTGTGGAGGACCTTGAGGGTGAC
GTGGAAGAAGACGGCGGTGATGGCGGTGGCGGTGGCGGGTCAGTCGAACG
CGAAAGCACGACGGTGGCTGCGACGAGAGCGCGGAGTGCCTCTCAGATGG
ACCGTGAAAACAACGCCGCAGTCGCGGCGGCAGCCGCTGCTCCAGCACTT
AGAACGGCAGCGGCGGGGTGGTTCGCGGGCGGCGAGGACGACGACGTCCC
TGTGTACCGTGGCTCTTCCGACTGGAGAGATTTCACCACGGCAGGGGTGG
GGGGGGTTGCAGGGGCGGCGGTGGCAGGACGAGAATCGCCAGGCGCTACT
GCAACCAGAACATTCATAGCAGATGCCGCCACGATCGGGAATGCGGCTGC
AGCATTCGGCGGCGGCGAGGGAGCGCTAGCCGGCGGGAGCGGTGCCGGCG
GAGGTCGCGGGAATGAAGGTGTGTTTGGCTTGACCGGCGCGACTGGGAAT
ACGGCGGCGGTGGCGGCGGTGGATGACCGGAGGGGGGGGACAGCAGCAAG
CCCACACGGTACCAGCTGGCTGCAGCAGGAGACGGCAGCGAGGGGGAGAG
GAGGGATGTACGGCGGTAGTGGTGGTGTCAGCGGCGGCGGCGCGGGGGCA
TCGCGATTCAAGACCGGTGACGGGGGGGTCGACCGGGGGGCTCTGCCGGA
AGCGTTGGCCGGGACTCTTGACCACATTGTGGGCCAACTAGATATGCTGA
CGAGGACGGTGGGGGTGTTGGAGCAGCGTCTTACGCTAACGGAGGATAGG
CTTCAGCGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig135:360298..371856- >mRNA_P-littoralis_Contig135.88.1 ID=mRNA_P-littoralis_Contig135.88.1|Name=mRNA_P-littoralis_Contig135.88.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2436bp|location=Sequence derived from alignment at P-littoralis_Contig135:360298..371856- (Pylaiella littoralis U1_48) ATGTCACAGTCTTTGCCTCGGACCGAGCAAGCGAGACGACACAGTGCGGT GTTGCCGTCGAGGTGTGCAGCGTGCGAGACCATGGCATTCAGATCATCGG ACTTTGGAGTCGGGACTAGCAGCAGCTTCATCGGGAGAAGAAGCCATCGA CGCATCGCAGGGCTGGACCAAACGATGCGGACGGATCGCGGTTCCCCTCC TCTATCCACCGCGAGCACGAGCCGAAGCGCCGCCGCCGCCGCCGCTACCG CCGCCGCCAAAGCCTCGCGCTCCTCCTTCACGCCTGTGGATCCGGAGCTG GAGCGGACTTTTCGGGGGCGCGGGGCGGCGGTAACCGGCGTCTCGTACTC CCCAGACATGAAGCAGCTCGTGTCCTCGGCGGCCGACAACAACCTCATGG TCTGGACGTTCCGGGCGCAGCTGAGGGCCCTGAGGTTCAAGGGCCACACC GCTACCGTCCACCACGCCGAGTTTTCGCCAGATGGGTCTCTAGTAGCCTC CGCGTCGAAAGACCGCACGGTGAGGCTGTGGACGCCCTCGGCTAGGGGCG GGTCGAGCGTCCTGAAGGGGCACATGGGGGGCGTGCGGCACGCGTCGTTC TCGAGGAACGGGCGGCTTCTGATCACCGCCTCGGAAGACAAGACTGTCAA GATCTGGTCGCTGCCCTCGCAGAGATTCGTCTGCACCCTCAACGGACACA ATAACTGGGTCCGCTGCGCTACGTTTAGCCCCGACTCTCGGCTGGCCACC TCCTGCGGGGACGACAAGACGGTGCGGCTGTGGGACGTGCAGACCCAGGA CTGCCTGAGAGCCTTCTTCGACCACGACGGGTCCGTGGGGCAGGCGCGCT TCCACCCGGACGGAACTTGCCTGGCGGCGTGCTCGGAGGACCGAACCATC AAGGTGTGGGATGCACGTTCCCACCAGCTGCTCCAGCACTACCCCGCCCA CGACGGCGAGGTGACATCGATAAGCTTCCACGAGTCGGGAAATTTCCTTC TGTCGTCGTCCACTGACGCCAGTGTTAAGATTTGGGATCTGCGCGAAGGG CGGCTGGTGTACACCCTCAAGGGTCACTCCGGCCCCGTGTCTGCGTGCGC CTTCAGCGCCGATGGCACCCGGTTCGCCTCCGGAGGTGAAGATGGCCTGG TCATGTCTTGGAGGAGCCACCTCGATAATCGCCTCGCCGGCGGCGACAGT GGGGGTGGTGGCGCCGCCAGAGGTTCGATGGCGTTGGGGGCGGCGGCATG CGATGACAGAATTATGAGCATGAACGATGGTGCTGCTGTCGCGGCGGCGG CGGCGGCGGTCCGGGGAGGGGGGTCGGGAGAAGGCATGGTGACCGCCCCT GGAAGGCAGCGACTGCAGCAGCAGCAGCAGCGCACTGCGCTCGGCGTTCG GACGACAAATGCGAGGACCTCAACCCCGGGGAGATCCGGCATCGCACGGC AGCCCGGTGCGTTCTCGTCGTCGTCGTCTATCGAAGGTGTGGCGGCAGCA AGACGACACGGATATTCAGCGCGAAAGGGCGGCATCAGCATCGGCGGCGG CGGCGGCGGCGACGGCGGTTCGTACCTTCGGACTACGAACGCCTCTCTAG GGCCGTCGCCTGGGCAATCCCGCGATGCAGATCAATACGACCACCAGCAG CGACCCCGCTGGACAGCCCCCGAAAACCGGCGGGGGAATGAAGGCTACAG AGCTAGCGAGGGAGCGCAGCCTTCCCCTCGGCGGCAGCAACGGCAGCATC GGCAACGTCACTTTTCTGTGGAGGACCTTGAGGGTGACGTGGAAGAAGAC GGCGGTGATGGCGGTGGCGGTGGCGGGTCAGTCGAACGCGAAAGCACGAC GGTGGCTGCGACGAGAGCGCGGAGTGCCTCTCAGATGGACCGTGAAAACA ACGCCGCAGTCGCGGCGGCAGCCGCTGCTCCAGCACTTAGAACGGCAGCG GCGGGGTGGTTCGCGGGCGGCGAGGACGACGACGTCCCTGTGTACCGTGG CTCTTCCGACTGGAGAGATTTCACCACGGCAGGGGTGGGGGGGGTTGCAG GGGCGGCGGTGGCAGGACGAGAATCGCCAGGCGCTACTGCAACCAGAACA TTCATAGCAGATGCCGCCACGATCGGGAATGCGGCTGCAGCATTCGGCGG CGGCGAGGGAGCGCTAGCCGGCGGGAGCGGTGCCGGCGGAGGTCGCGGGA ATGAAGGTACGGCAGCGAGGGGGAGAGGAGGGATGTACGGCGGTAGTGGT GGTGTCAGCGGCGGCGGCGCGGGGGCATCGCGATTCAAGACCGGTGACGG GGGGGTCGACCGGGGGGCTCTGCCGGAAGCGTTGGCCGGGACTCTTGACC ACATTGTGGGCCAACTAGATATGCTGACGAGGACGGTGGGGGTGTTGGAG CAGCGTCTTACGCTAACGGAGGATAGGCTTCAGCGG back to top
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