prot_P-littoralis_Contig135.63.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig135.63.1
Unique Nameprot_P-littoralis_Contig135.63.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length98
Homology
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BLAST of mRNA_P-littoralis_Contig135.63.1 vs. uniprot
Match: D8LSG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG2_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 3.520e-27
Identity = 50/60 (83.33%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:    1 WLLSPGWFSRAVEGLQQWLADGEEGVIPNFRDAAAAALGERWASTPPGWYDPGGDKPSFV 60
            WLLSPGW SRAVE +Q+WLADG+EGVIP+FRDAAAAA GERWASTP GWY+PGGD PSFV
Sbjct: 1545 WLLSPGWASRAVEEIQKWLADGDEGVIPSFRDAAAAAFGERWASTPSGWYEPGGDMPSFV 1604
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BLAST of mRNA_P-littoralis_Contig135.63.1 vs. uniprot
Match: A0A6H5KSH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH1_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.710e-14
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0 
Query:   13 EGLQQWLA--DGEEGVIPNFRDAAAAALGERWASTPPGWYDPGGDKPSFVTDDDDDNDGTTNGD 74
            E +  WLA  DG+  VIP+FRDAAAAA GERW STP GW+DPGGD PSFV  D +D    ++GD
Sbjct:  183 ESIADWLAPADGDVLVIPSFRDAAAAAFGERWRSTPAGWFDPGGDMPSFVAADLNDEGSESDGD 246
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.63.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSG2_ECTSI3.520e-2783.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSH1_9PHAE1.710e-1460.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig135contigP-littoralis_Contig135:237293..238300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig135.63.1mRNA_P-littoralis_Contig135.63.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig135 237293..238302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig135.63.1 ID=prot_P-littoralis_Contig135.63.1|Name=mRNA_P-littoralis_Contig135.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=98bp
WLLSPGWFSRAVEGLQQWLADGEEGVIPNFRDAAAAALGERWASTPPGWY
DPGGDKPSFVTDDDDDNDGTTNGDNVHLRGRSRFSSSVTTPTMLGRGA
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