prot_P-littoralis_Contig135.62.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig135.62.1
Unique Nameprot_P-littoralis_Contig135.62.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length97
Homology
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BLAST of mRNA_P-littoralis_Contig135.62.1 vs. uniprot
Match: D8LSG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG2_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 8.110e-29
Identity = 79/100 (79.00%), Postives = 84/100 (84.00%), Query Frame = 0 
Query:    1 MGSPPGSVETAGGGSXXXXXX--ASLMAALAAERDAAAELEAAEASAAERVAREFREFFANIPRDYRDELGFTDVLVSVVRIRY-RAGPQANAGAAGTTP 97
            +GSPPGS+ETAGGG XXXXXX   SL+AALAAERDAA ELEAAEASAAERVAREFR FF NIPRDYR+ELGFTDVLVSVVRIRY    P+  AGA   TP
Sbjct: 1099 LGSPPGSIETAGGGXXXXXXXXQTSLLAALAAERDAALELEAAEASAAERVAREFRGFFQNIPRDYRNELGFTDVLVSVVRIRYGNNSPKTFAGAGAATP 1198
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.62.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSG2_ECTSI8.110e-2979.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig135contigP-littoralis_Contig135:230917..232279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig135.62.1mRNA_P-littoralis_Contig135.62.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig135 230400..232279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig135.62.1 ID=prot_P-littoralis_Contig135.62.1|Name=mRNA_P-littoralis_Contig135.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=97bp
MGSPPGSVETAGGGSGSGSGQASLMAALAAERDAAAELEAAEASAAERVA
REFREFFANIPRDYRDELGFTDVLVSVVRIRYRAGPQANAGAAGTTP
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