prot_P-littoralis_Contig135.54.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig135.54.3
Unique Nameprot_P-littoralis_Contig135.54.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length277
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig135.54.3 vs. uniprot
Match: D7FUI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI2_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 5.000e-16
Identity = 63/136 (46.32%), Postives = 81/136 (59.56%), Query Frame = 0 
Query:   64 LIVNFTTATGRRPPDRVDSIAIEHGKFLQGLRRLRRELLKKLQGKTYDNKKRGQRSLVCG-GGPESSPAS-NSSSLPILSLCRNHSGTIVRGEKTNRRHSIDADVVARALAKVDRAASSYDTRRIDNLRQADLSRV 197
            +IVNF+    R+       I+IEHG+F Q   RLRR+LLKK QG          +SL+ G  GPESS  S ++SSLP+LSL R+  G + R E  N   ++DAD + RALAKVDRAA SYD RR   L  +   R+
Sbjct:    1 MIVNFSKKRCRQGGS---IISIEHGEFSQAFLRLRRDLLKKEQGNGCGKTAHKPKSLIDGIRGPESSKTSRDTSSLPLLSLRRSLPG-MTRVEDGNLHRAVDADTINRALAKVDRAAWSYDPRRTVRLTSSAFGRI 132
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.54.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUI2_ECTSI5.000e-1646.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig135contigP-littoralis_Contig135:207277..209807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig135.54.3mRNA_P-littoralis_Contig135.54.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig135 205491..209822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig135.54.3 ID=prot_P-littoralis_Contig135.54.3|Name=mRNA_P-littoralis_Contig135.54.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=277bp
MAVPRQRILRSALDKAGEVALRLTLEVSAGVKAFDGPPLKPRDVKDLFLR
NFRVRVSTSEAEALIVNFTTATGRRPPDRVDSIAIEHGKFLQGLRRLRRE
LLKKLQGKTYDNKKRGQRSLVCGGGPESSPASNSSSLPILSLCRNHSGTI
VRGEKTNRRHSIDADVVARALAKVDRAASSYDTRRIDNLRQADLSRVTSP
RTFGGALLARFDVRVDPLEQSELVSLLQDEKGTVDIERFRTYFLGIIEEY
SRASENPKKGAFLPPLRAAIDSDRSL*
back to top