prot_P-littoralis_Contig1003.9.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1003.9.2
Unique Nameprot_P-littoralis_Contig1003.9.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length148
Homology
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BLAST of mRNA_P-littoralis_Contig1003.9.2 vs. uniprot
Match: A0A6H5JSM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM1_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 3.890e-66
Identity = 102/148 (68.92%), Postives = 117/148 (79.05%), Query Frame = 0 
Query:    1 MAAVTPRDARIIAASLSCLLLLFGFQT-VGEMTNMALWGLAGVSMWSWAFTVSGRLKTRGHVEDNVRVVRHQSFVVSALCFGTALVGTIEAMIACYVQPWWLQVPANIGFTLLAFAVGCSVFGFSHDWVSQDPRLEKPLFLLDICVVS 147
            M AVT RDA I+A   S LLLL  F   VG MT+MA+W  AGV+ WSW FTVSGRL+TR  VEDNVRVVRHQSFV+  LC GTA+VGT+EAM+A YV+PWWLQ+ AN GFT LAF VGC +FG SH+WV +DP LEKPLFLLD+CVVS
Sbjct:    1 MVAVTGRDASIVAL-FSYLLLLCAFPAYVGRMTSMAVWSAAGVAGWSWGFTVSGRLRTRDPVEDNVRVVRHQSFVIWTLCCGTAVVGTMEAMVASYVRPWWLQIMANAGFTFLAFVVGCGIFGHSHEWVLRDPNLEKPLFLLDVCVVS 147
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1003.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JSM1_9PHAE3.890e-6668.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1003contigP-littoralis_Contig1003:21901..27258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1003.9.2mRNA_P-littoralis_Contig1003.9.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1003 21223..27275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1003.9.2 ID=prot_P-littoralis_Contig1003.9.2|Name=mRNA_P-littoralis_Contig1003.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=148bp
MAAVTPRDARIIAASLSCLLLLFGFQTVGEMTNMALWGLAGVSMWSWAFT
VSGRLKTRGHVEDNVRVVRHQSFVVSALCFGTALVGTIEAMIACYVQPWW
LQVPANIGFTLLAFAVGCSVFGFSHDWVSQDPRLEKPLFLLDICVVS*
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