prot_P-littoralis_Contig135.51.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig135.51.2
Unique Nameprot_P-littoralis_Contig135.51.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length243
Homology
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: D7FUI0_ECTSI (Rab32C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI0_ECTSI)

HSP 1 Score: 347 bits (891), Expect = 8.190e-119
Identity = 174/243 (71.60%), Postives = 199/243 (81.89%), Query Frame = 0
Query:    1 MSAATDASPVIKILVVGDAGVGKTSVIQRYINNSFGPKV-PTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELFGPGMRRSAAAFSKRVKERGTPPSGVHLGSRGLRLATAASGNGLTHSKGCCG 242
            MS+A + SPVIKILVVGDAGVGKTSVIQR++N+ F P   PT+GVDFFIKEVAL+  +S S   TTVRVQLWDIAGQDRA+K+NR YFKGALGAL+VYDISRPQTFDSAAKWKQELDA+ITLPNG  LP VLLGNKVDLEVAKVDVSY+D FV+TH FVAWSDVSAKD  N +F++SVACL+ +LLCDEELFGPGMRRSAAAFS R++ R          S+G+RLA +    G   + GCCG
Sbjct:    1 MSSAAETSPVIKILVVGDAGVGKTSVIQRFVNDEFSPTHRPTIGVDFFIKEVALNGDQSESFPGTTVRVQLWDIAGQDRARKMNRAYFKGALGALVVYDISRPQTFDSAAKWKQELDANITLPNGSSLPVVLLGNKVDLEVAKVDVSYIDSFVETHRFVAWSDVSAKDAINGDFEMSVACLIQKLLCDEELFGPGMRRSAAAFSTRLQAREQSAHHTGSSSKGVRLALSTEATGQASNNGCCG 243          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: W2QJV6_PHYPN (Ras-related protein Rab n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2QJV6_PHYPN)

HSP 1 Score: 179 bits (453), Expect = 1.020e-52
Identity = 106/242 (43.80%), Postives = 148/242 (61.16%), Query Frame = 0
Query:    1 MSAATDASPVIKILVVGDAGVGKTSVIQRYINNSFGPKV-PTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELFGPGMRRSAAAFSKRVKERGTPPSGVHLGSRGLRLATAASGNGLTHSKGCC 241
            ++AA DA  VIK+LV+GDA  GKTS+I+RY++++F      T+GVDF +K V +        S TTVR+QLWDIAGQ+  + +NRVY+K ALGAL+VYD+SRP+TFDS  KWK+E+D+ + LPNG+ LP +L GNK DL+   VD  ++D F  T+ F  W D SAK+  N   D +   LV+ +L  +++F    R+S A      K+R              R  +AA+G     S  CC
Sbjct:    6 VNAAQDA--VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTV--------SGTTVRLQLWDIAGQEHFRALNRVYYKDALGALLVYDMSRPETFDSILKWKKEIDSKVELPNGKTLPVILCGNKCDLK-EYVDREFLDEFCNTNNFTGWFDTSAKE--NIHIDDAAKALVTGILQHKDIFE---RKSEA------KKRNDT----------FRPTSAANGGNANQSSWCC 215          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A1V9YUT9_9STRA (Ras-related protein Rab n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUT9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.990e-52
Identity = 95/192 (49.48%), Postives = 132/192 (68.75%), Query Frame = 0
Query:    1 MSAATDASPVIKILVVGDAGVGKTSVIQRYINNSFGPK-VPTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELF 191
            ++AA DA  V+K+LV+GDA  GKTS+I+RY++N F      T+GVDF +K V + NG       TT+RVQLWDIAGQ+  + +NRVY+K ALGAL+VYD+SRP TF+SA KWK+E+D  + LPN + LP +L GNK DL   +VD +++D F +T+GF  W D SAK+  N   D +   LV+ +L   ++F
Sbjct:    7 VAAAQDA--VVKVLVLGDAATGKTSIIKRYVHNVFSDHHKTTIGVDFALKPVTV-NG-------TTLRVQLWDIAGQEHFRALNRVYYKDALGALVVYDMSRPDTFESAIKWKKEIDTKVELPNKKPLPVILCGNKCDL-AGEVDRAFLDEFCETNGFAGWFDTSAKE--NKNIDEANKALVAAILAHRDIF 185          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: H3HAQ4_PHYRM (Ras-related protein Rab n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3HAQ4_PHYRM)

HSP 1 Score: 177 bits (450), Expect = 2.900e-52
Identity = 107/242 (44.21%), Postives = 149/242 (61.57%), Query Frame = 0
Query:    1 MSAATDASPVIKILVVGDAGVGKTSVIQRYINNSFGPKV-PTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELFGPGMRRSAAAFSKRVKERGTPPSGVHLGSRGLRLATAASGNGLTHSKGCC 241
            ++AA DA  VIK+LV+GDA  GKTS+I+RY++++F      T+GVDF +K V + NG       TTVR+QLWDIAGQ+  + +NRVY+K ALGAL+VYD+SRP+TFDS  KWK+E+D+ + LPNG+ LP +L GNK DL+   VD  ++D F +T+ F  W D SAK+  N   D +   LV+ +L  +++F    R+S A      K+R              R   AA+G     S  CC
Sbjct:    6 VNAAQDA--VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTV-NG-------TTVRLQLWDIAGQEHFRALNRVYYKDALGALLVYDMSRPETFDSVLKWKKEIDSKVELPNGKPLPVILCGNKCDLK-EDVDREFLDEFCKTNNFTGWFDTSAKE--NIHIDDAAKALVTGILEHQDIFE---RKSEA------KKRNDT----------FRPTGAANGGNANQSSWCC 215          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.900e-52
Identity = 86/164 (52.44%), Postives = 113/164 (68.90%), Query Frame = 0
Query:    8 SPVIKILVVGDAGVGKTSVIQRYINNSFGPK-VPTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSN 170
            S V+K+LV+GD   GKTS+I+RY++N F      TVGVDF +K++ +          T VR+QLWDIAGQDR   + RVY+K A GA++VYD++RP TF+  +KWK+E+D  ++LPNG  +P VLLGNK DLE AKVD  Y+D F + HGFV W D SAK   N
Sbjct:    7 SLVLKVLVLGDPATGKTSIIKRYVHNFFSTHHKTTVGVDFALKQLHV--------RGTDVRLQLWDIAGQDRFGAIARVYYKDAFGAMLVYDVTRPPTFEMVSKWKEEIDTKVSLPNGEPIPVVLLGNKSDLEKAKVDTEYLDEFCKQHGFVGWFDTSAKTNQN 162          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A1V9YVF5_9STRA (Ras-related protein Rab n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YVF5_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.140e-52
Identity = 88/183 (48.09%), Postives = 127/183 (69.40%), Query Frame = 0
Query:   10 VIKILVVGDAGVGKTSVIQRYINNSFGPK-VPTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELF 191
            V+K+LV+GDA  GKTS+I+RY++N F  +   T+GVDF +K V ++N        TT+RVQLWDIAGQ+  + +NRVY+K ALGAL+VYD+SRP TF+SA KWK+E+D  + LPN + LP +L GNK DL  + +D +++D F +T+GF  W + SAK+  N   D +   LV+ +L   ++F
Sbjct:   12 VVKVLVLGDAATGKTSIIKRYVHNVFSDQHKTTIGVDFALKPVTVNN--------TTLRVQLWDIAGQEHFRALNRVYYKDALGALVVYDMSRPDTFESALKWKKEIDTKVELPNKKPLPVILCGNKCDL-ASDIDRAFLDGFCETNGFAGWFETSAKE--NTNIDEANKALVAAILAHRDVF 183          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A7S2APD4_9STRA (Ras-related protein Rab n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APD4_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.220e-51
Identity = 90/203 (44.33%), Postives = 130/203 (64.04%), Query Frame = 0
Query:   10 VIKILVVGDAGVGKTSVIQRYINNSFGPKV-PTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELFGPGMRRSAAAFSKRVKERGT 211
            V+K+LV+GD   GKTS+I+RY++N F      TVGVDF +K++ + N        T VR+QLWDIAGQDR   + RVY+K A GA +VYD+SR +TF++ +KWK+E+DA + LPNG  LP VLL NK D+   ++D + ++RF + HGFVAW + SAK     + D +   LV ++L  +++F    R       +RV  RG+
Sbjct:   27 VLKVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLQVYN--------TVVRLQLWDIAGQDRFGAIARVYYKDAFGAFLVYDLSRQRTFETVSKWKKEIDAKVVLPNGHPLPVVLLANKCDIAGVELDAAELNRFCEDHGFVAWFETSAKTAH--KIDAAARFLVEKILSHQDIFNDKRRNQEDTTDRRVLSRGS 219          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.270e-51
Identity = 98/237 (41.35%), Postives = 140/237 (59.07%), Query Frame = 0
Query:    8 SPVIKILVVGDAGVGKTSVIQRYINNSFGPKV-PTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELFGPGMRRSAAAFSKRVKERGTPPSGVHLGSRGLRLATAAS--GNGLTHSKGCC 241
            S V+K+LV+GD   GKTS+I+RY++N F      TVGVDF +K++ + N          VR+QLWDIAGQDR   ++RVY+K ALGA +VYD++RP TFD+  KWK E+DA + LPN   LP VLL NK D+E  K+D   +D+F + HGF+AW + SAK  ++ + D +   L+  +L  E++           F+++ K+R        L  R  R A+A     +    S GCC
Sbjct:    6 SQVLKVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVRN--------QLVRLQLWDIAGQDRFGAISRVYYKDALGAFLVYDLARPATFDTVVKWKGEIDAKVVLPNHEPLPVVLLANKCDIEGVKIDSDALDKFCEEHGFIAWFETSAK--TDHKIDAAARFLLENILEHEDI-----------FAEKAKQRQRQEQNDPLRLRAQRSASAGEQQDDAFYASAGCC 221          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A8K1C4T0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T0_PYTOL)

HSP 1 Score: 176 bits (445), Expect = 1.640e-51
Identity = 95/192 (49.48%), Postives = 133/192 (69.27%), Query Frame = 0
Query:    1 MSAATDASPVIKILVVGDAGVGKTSVIQRYINNSFGPKV-PTVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELF 191
            +SAA DA  VIK+LV+GDA  GKTS+I+RY++++F      T+GVDF +K V + NG       TTVR+QLWDIAGQ+  + +NRVY+K +LGAL+VYDISRP+TF+S  KWK+E+D+ + LPN + LP +L GNK DL    VD +++D F +T+GF  W + SAK+  N   D +   LVS +L   ++F
Sbjct:    6 VSAAQDA--VIKVLVLGDAATGKTSIIKRYVHDAFTEHHRTTIGVDFALKAVTV-NG-------TTVRLQLWDIAGQEHFRALNRVYYKDSLGALLVYDISRPETFESVIKWKKEIDSKVELPNNKPLPVILCGNKCDLS-GDVDRAFLDAFCETNGFAGWFETSAKE--NKNIDEAAKALVSSILEHRDIF 184          
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Match: A0A836CJ20_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ20_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.140e-51
Identity = 94/188 (50.00%), Postives = 129/188 (68.62%), Query Frame = 0
Query:    1 MSAATDA-SPVIKILVVGDAGVGKTSVIQRYINNSFGPKVP-TVGVDFFIKEVALDNGRSGSSSATTVRVQLWDIAGQDRAK--KVNRVYFKGALGALIVYDISRPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDRFVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRL 184
            M++++DA +P +K+LV+GD+  GKTS+I+R+    F   +  TVGVDF +KEV +            VRVQLWDIAGQDR+    +NRVY++GA GALIVYDI+RP TFD  AKWK +LDA + L +G+ LPAVL+GNK DLE+A VD  +++R+    GFV W D SAKD  + EF  +V+ L+  +
Sbjct:    1 MASSSDAPAPTLKLLVIGDSASGKTSLIKRFCLGDFDEDLQATVGVDFTLKEVQI--------LGLNVRVQLWDIAGQDRSGGGTMNRVYYQGACGALIVYDITRPATFDGVAKWKADLDAKVLLEDGKSLPAVLIGNKKDLEIAIVDGDFMNRYCGESGFVTWKDTSAKDPEDTEFQSAVSVLIEEI 180          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.51.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUI0_ECTSI8.190e-11971.60Rab32C, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
W2QJV6_PHYPN1.020e-5243.80Ras-related protein Rab n=3 Tax=Peronosporaceae Ta... [more]
A0A1V9YUT9_9STRA1.990e-5249.48Ras-related protein Rab n=1 Tax=Thraustotheca clav... [more]
H3HAQ4_PHYRM2.900e-5244.21Ras-related protein Rab n=17 Tax=Peronosporaceae T... [more]
A0A7S2V4T6_9STRA3.900e-5252.44Ras-related protein Rab n=1 Tax=Fibrocapsa japonic... [more]
A0A1V9YVF5_9STRA5.140e-5248.09Ras-related protein Rab n=3 Tax=Saprolegniaceae Ta... [more]
A0A7S2APD4_9STRA1.220e-5144.33Ras-related protein Rab n=1 Tax=Dictyocha speculum... [more]
A0A7S2S186_9STRA1.270e-5141.35Ras-related protein Rab n=1 Tax=Rhizochromulina ma... [more]
A0A8K1C4T0_PYTOL1.640e-5149.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A836CJ20_9STRA2.140e-5150.00P-loop containing nucleoside triphosphate hydrolas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 11..32
score: 41.15
coord: 59..81
score: 29.67
coord: 125..138
score: 46.02
coord: 33..49
score: 24.45
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 16..234
e-value: 0.002
score: 0.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 11..183
e-value: 1.8E-34
score: 130.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 8..182
e-value: 2.0E-6
score: -18.3
NoneNo IPR availablePANTHERPTHR24073:SF862RAS-RELATED PROTEIN RAB-32coord: 10..195
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 10..195
NoneNo IPR availablePROSITEPS51419RABcoord: 6..241
score: 22.392605
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 13..183
e-value: 7.7E-6
score: -42.9
IPR001806Small GTPasePFAMPF00071Rascoord: 12..172
e-value: 7.9E-34
score: 116.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 6..178
e-value: 1.4E-41
score: 143.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..170
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..172
e-value: 1.2E-19
score: 68.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig135contigP-littoralis_Contig135:191804..196727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig135.51.2mRNA_P-littoralis_Contig135.51.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig135 191742..196879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig135.51.2 ID=prot_P-littoralis_Contig135.51.2|Name=mRNA_P-littoralis_Contig135.51.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=243bp
MSAATDASPVIKILVVGDAGVGKTSVIQRYINNSFGPKVPTVGVDFFIKE
VALDNGRSGSSSATTVRVQLWDIAGQDRAKKVNRVYFKGALGALIVYDIS
RPQTFDSAAKWKQELDASITLPNGRGLPAVLLGNKVDLEVAKVDVSYVDR
FVQTHGFVAWSDVSAKDMSNAEFDISVACLVSRLLCDEELFGPGMRRSAA
AFSKRVKERGTPPSGVHLGSRGLRLATAASGNGLTHSKGCCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom