mRNA_P-littoralis_Contig135.38.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig135.38.1
Unique NamemRNA_P-littoralis_Contig135.38.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: D8LSG7_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG7_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 8.200e-155
Identity = 367/605 (60.66%), Postives = 408/605 (67.44%), Query Frame = 1
Query:  268 MAGFLVVMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEGFCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRLTKAWENGSLAPPAAPVXXXXXXXXXXXXXXEPGASAGAAPEVKTLVPVAAAGGEGRGGGVSXXXXXXXXDGXXXXXXXXXXXXXXXXXXXYIDVEGDEDDAISSLAGAAAADNVDIAIDTTASSGTGLRRRGGGQRESGDISGSGQQGFSGDTTAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLPDNIYDSGMWGNLMEVLFPRSLRKDGKDKALPYRDPFRLSHKPYWVPA 2082
            MAGFLVVM +NV+LL  AI+LMFFADP+S G+ GQ YRLVCEG PR+ SAG+R VFG+ CAG+V+ECGN+V+NKPNR+MQGFYMVIVN SFICFI EGFPRLPN+VL WPYH A GY+VMAACI SFV ACN  PG V+   A G    XXXXXXXXXXXX                         RHAGLYPHDGVVFVEGFC TC+V+KPARSKHXXXXXXXXXXXXXXXXXXXXX GEENYR FLLFL+IHSSMLWYG VL YGILKS+V +RKL++ARFY + +K+YVRGSYSV+ QYL++H+GKLCGLLAL+ TMA+VLTGFLSYHVYL+LKGTTTNESAKWGE            E    AP +APV XXXXXXXXXXXXX                                           XXXXXXXXXXXXXXX   I VE             A      +     A+ GTG+RR                                          XXXXXXXXXXXXXXXXXXXXXXXXXGPLPDNIYD+GMW NLMEVLFPRSLRK+GK KALP+RDPFRLS+KPYWVPA
Sbjct:    1 MAGFLVVMSINVLLLVLAIFLMFFADPESHGYGGQLYRLVCEGGPRMLSAGMRLVFGEACAGKVSECGNWVMNKPNRLMQGFYMVIVNCSFICFIFEGFPRLPNDVLPWPYHTATGYLVMAACIGSFVLACNVPPGSVRAPAAEGASNRXXXXXXXXXXXXAPGRNAGGG----------------RHAGLYPHDGVVFVEGFCKTCQVAKPARSKHXXXXXXXXXXXXXXXXXXXXXXGEENYRIFLLFLIIHSSMLWYGTVLTYGILKSVVMKRKLLTARFYHKRSKTYVRGSYSVVLQYLMHHYGKLCGLLALSATMALVLTGFLSYHVYLLLKGTTTNESAKWGETG----------EGQPAAPASAPVDXXXXXXXXXXXXXX------------------------------------------XXXXXXXXXXXXXXXGGDIGVEXXXXXXXXXXXAGA------VDSSAAATGGTGMRRX-----------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXGPLPDNIYDNGMWANLMEVLFPRSLRKEGKGKALPHRDPFRLSYKPYWVPA 490          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: A0A6H5L085_9PHAE (Palmitoyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L085_9PHAE)

HSP 1 Score: 464 bits (1193), Expect = 1.650e-149
Identity = 251/369 (68.02%), Postives = 286/369 (77.51%), Query Frame = 1
Query:  268 MAGFLVVMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEGFCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRLTKAWENGSLAPP 1374
            MAGFL+VM +NV+LL  AI+LMF ADP+S G+ GQ YRLVCEG PR+ S G+R VFG+ CAGRV+ECGN V+NKPNR+MQGFYMVIVN SFICFI EGFPRLPN+VL WPYH    Y+VMAACI SF+ ACN  PG V+   A G                                         RHAGLYPHDGVVFVEGFC TC+V+KPARSKHXXXXXXXXXXXXXXXXXXXXX GEENYR FLLFL++HSSMLWYG VL YGILKS+V +RKL++ARFY + +K+YVRGSY V+ QYL++H+GKLCGLLAL+ TMA+VLTGF SYHVYL+LKGTTTNESAKWGEAKD+HRRLTKAWENGSL PP
Sbjct:    1 MAGFLLVMSINVLLLVLAIFLMFIADPESHGYGGQLYRLVCEGGPRMLSTGMRLVFGEACAGRVSECGNLVMNKPNRLMQGFYMVIVNCSFICFIFEGFPRLPNDVLPWPYHTVTSYLVMAACIGSFLLACNVPPGSVRAPAAEGASNRRRGGAGEEGVAAAPGQNAGGG----------------RHAGLYPHDGVVFVEGFCKTCQVAKPARSKHXXXXXXXXXXXXXXXXXXXXXXGEENYRIFLLFLIVHSSMLWYGTVLTYGILKSVVMKRKLLTARFYHKRSKTYVRGSYGVVLQYLMHHYGKLCGLLALSATMALVLTGFFSYHVYLLLKGTTTNESAKWGEAKDFHRRLTKAWENGSLVPP 353          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: A0A835ZHT4_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHT4_9STRA)

HSP 1 Score: 219 bits (559), Expect = 3.010e-59
Identity = 134/362 (37.02%), Postives = 184/362 (50.83%), Query Frame = 1
Query:  268 MAGFLVVMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEG-FCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRLTKAW 1350
            M G L V+  N +++G+  YL+F ADP +   +  A  L+  G  ++  A    VFGDR         N+    PN ++Q FY+V+VN  F+ F++ G+P LPNE +  P H  + ++VMAACI +F  AC   PG + V  A                                                YP DGV+F+ G  C TC+V K ARSKH                     VGE NYR FLLFL+ H +MLWY A L+ GIL S+   ++L SA F   +T +      +VI Q+  +HH +LC LL LAG M  VL+GF +YH +L  +GTTTNE+AKWG+A+ YHRRL +A+
Sbjct:    1 MVGILTVLAFNTVVVGSVGYLLFCADPQT---NRLARALLHTGPNKLLGAATA-VFGDR----PERLYNFCCFTPNPLLQIFYLVLVNGGFLMFMVHGYPLLPNEYMG-PVHLVLPFLVMAACILTFTLACTVEPGHLTVQNAAAYDN-------------------------------------------YPADGVIFLPGKVCPTCKVPKLARSKHCRVCNRCVSRFDHHCGWLNQCVGERNYRFFLLFLVTHVAMLWYAAALLGGILLSVANAKRLWSATFVHPATGARAPPGAAVIAQWFAFHHAQLCALLLLAGAMGAVLSGFTAYHAWLAARGTTTNEAAKWGDARAYHRRLARAY 310          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: W7TTJ0_9STRA (Palmitoyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ0_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.500e-38
Identity = 107/346 (30.92%), Postives = 160/346 (46.24%), Query Frame = 1
Query:  286 VMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEG-FCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAK 1320
            ++ V + L+   I++   ADP+S    G+   L+ E +P   +  LRR    +    +A+  +Y++ + N I+Q  Y+++   SF  ++ EG+ R+P   L      A+   ++ AC+ SFV AC+   G +  S                                                  Y  D V++V G  C TC V K ARSKH                     VGE NYR+FL FL +HS    YG+  ++GIL+  + + KL  A FY  S+   V  S  V+ QYL+ H G +CG+LALA  MA+VL GFL YH++L  + TTTNE+ KW E +
Sbjct:    6 ILVVYMTLIAFLIWVCVLADPNSDTLGGRLNVLLTEEIPTRITFNLRRRLPSKVFDALAKAYDYIVRQRNPILQCLYLLLFLGSFATYLYEGWGRIPLGDL------ALSVALVLACLASFVVACSVPAGTISPST-------------------------------------------WERYDNYKPDNVIYVAGRVCPTCDVVKLARSKHCRLCGVCQSRFDHHCGWLNQCVGEVNYRHFLFFLALHSCTFLYGSSRLWGILRREMIKNKLWDATFYSPSSGQTVGSSPLVVCQYLVVHEGAVCGVLALAFVMAIVLAGFLLYHLWLAGQNTTTNETFKWAEVR 302          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: A0A7S2PPS5_9STRA (Palmitoyltransferase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPS5_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.720e-34
Identity = 105/358 (29.33%), Postives = 153/358 (42.74%), Query Frame = 1
Query:  271 AGFLVV-MGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEG-FCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRL 1338
            A +LVV + + V+   +  Y+   ADP           L+    P  F+ G++ + G+   G++    +Y  N+P+  MQ  Y  IV   +      GF  +PN  +   YH+  GYVV   CI S+V     SPG +                                                     Y +D ++F  G  C T  + K ARSK+                     +GEENYR F+ FL++H+ MLWYG VL   I KS  A   L  A FY    +  +R SY ++ QYL+  H  L  LL L   MA++++GFL +H+YL+ +G TTNE  KW E +  H+ L
Sbjct:    4 ASYLVVAITLYVVCFASLTYICIIADPRK----NPVANLIMHKAPNKFADGVKWLMGETIKGKLDSFTHYCANEPHPFMQVVYCFIVFGGWTVMFHYGFTLVPNTYVGG-YHKYNGYVVFLLCISSYVTVVKASPGTITAMTLTKYDN-------------------------------------------YDYDKIMFHPGQTCPTVGIRKLARSKYDRMTRRHVPRFDHYCGWLNNTIGEENYRLFIWFLIVHTGMLWYGVVLTVLIFKSEAATLNLKYAAFYDNRGRP-LRTSYVIVVQYLIQEHNMLAALLLLMFVMALIVSGFLCFHIYLISRGMTTNEFYKWNEIQKRHKIL 312          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: A0A8J5XF01_DIALT (Palmitoyltransferase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF01_DIALT)

HSP 1 Score: 128 bits (322), Expect = 7.340e-28
Identity = 97/358 (27.09%), Postives = 143/358 (39.94%), Query Frame = 1
Query:  280 LVVMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEGFCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRLTKAWE 1353
            L ++GV V+L      +M F  P S G  G+ +R VC G    F   + R+ G  C  R+    +YV  +PN ++   Y+ I+       +   FP +PNE + W  H  +   ++A  +      C  +PGV+                                                  A  +P+DGV++   FC TCR+ +PARSKH                      GE NYR FL FL  H  +  YGA ++  I   +      +   +Y     ++V  S +V  QYL+  H  +  +L  A  M  V+  F  YH YLV  G TTNE+ KW +     RR  +A E
Sbjct:    6 LYLLGVYVLLAVVFCVVMLFG-PSSDGPIGRVHRGVC-GCLANFRQTVERIVGQACCQRLETAEDYVCWRPNPLLASLYVSIMLAFAFAVVRFLFPLVPNERVPW-VHRPLSLAIIAGGVALHQLCCYANPGVITCETVA------------------------------------------EFADGFPYDGVMYTPKFCETCRIVRPARSKHCAICDRCVAKFDHHCPWINTCAGERNYRLFLAFLAYHVFVCAYGAAMLVRIGAWLAFDVHKLHDAYYLDERGAHVAVSVTVGVQYLMALHPAVFSMLFFASIMGCVICAFFGYHAYLVGSGLTTNETYKWADLHAEQRRQRRARE 318          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: A0A7R9US56_DIALT (Palmitoyltransferase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9US56_DIALT)

HSP 1 Score: 126 bits (316), Expect = 7.960e-28
Identity = 95/352 (26.99%), Postives = 140/352 (39.77%), Query Frame = 1
Query:  280 LVVMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEGFCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRR 1335
            L ++GV V+L      +M F  P S G  G+ +R VC G    F   + R+ G  C  R+    +YV  +PN ++   Y+ I+       +   FP +PNE + W  H  +   ++A  +      C  +PGV+                                                  A  +P+DGV++   FC TCR+ +PARSKH                      GE NYR FL FL  H  +  YGA ++  I   +      +   +Y     ++V  S +V  QYL+  H  +  +L  A  M  V+  F  YH YLV  G TTNE+ KW +     RR
Sbjct:   26 LYLLGVYVLLAVVFCVVMLFG-PSSDGPIGRVHRGVC-GCLANFRQTVERIVGQACCQRLETAEDYVCWRPNPLLASLYVSIMLAFAFAVVRFLFPLVPNERVPW-VHRPLSLAIIAGGVALHQLCCYANPGVITCETVA------------------------------------------EFADGFPYDGVMYTPKFCETCRIVRPARSKHCAICDRCVAKFDHHCPWINTCAGERNYRLFLAFLAYHVFVCAYGAAMLVRIGAWLAFDVHKLHDAYYLDERGAHVAVSVTVGVQYLMALHPAVFSMLFFASIMGCVICAFFGYHAYLVGSGLTTNETYKWADLHAEQRR 332          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: B8BUP3_THAPS (Palmitoyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUP3_THAPS)

HSP 1 Score: 124 bits (311), Expect = 7.740e-27
Identity = 90/355 (25.35%), Postives = 150/355 (42.25%), Query Frame = 1
Query:  304 ILLGAAIYLMF-----FADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEGFCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRLTKAWE 1353
            IL+  A++  F      ADP+S    G       + +P +    L R+ G +    V +         +R +Q  Y+V+V  S+      G+  +         H+  GY V AAC+ S+  AC+TSPG V  S  +                                               YP+D +++    C T  + K ARSK+                     VGE NYR FLLFL++H  M +YG   +  +L   V  + L++A F+   T + V   Y ++  Y++  + ++CG+L L   M+V+L+ FL +H+Y+  +  TTNE  KW   + +H+++ + +E
Sbjct:    7 ILIFTALFAFFTYACIIADPESSTIAG----FFMKDLPSLLFQQLERIIGKKGVATVEKW-------TDRSLQLVYLVVVLGSWSIIFTYGYEAIQKSNYISNNHQYAGYAVFAACMSSWHYACHTSPGSVT-SRTIALYDH------------------------------------------YPYDSILYYNKQCPTLNIRKVARSKYDRFSKQHVPRFDHFCGWLNQAVGELNYRWFLLFLMVHVGMCYYGTWAMGTVLYGEVVDKNLLNATFFNAVTGTEVNADYIIVFHYMMMRYFEICGVLLLMTVMSVMLSIFLGFHLYITARNMTTNEYFKWKAVRRWHKKMKQKYE 307          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: A0A2R5G4C4_9STRA (Palmitoyltransferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4C4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.690e-26
Identity = 111/310 (35.81%), Postives = 154/310 (49.68%), Query Frame = 1
Query:  436 GDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGL--YPHDGVVFVEGF-CATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEAKDYHRRLTKAWEN 1356
            G R  G  +   +YV NKPN ++Q  Y+ +V   FI F  E  PR+PN  L    H    +V +   + +FV A  ++PG +                                                 HA    +P+DG ++V+   C+TC + KPARSKHXXXXXXXXXXXXXXXXXXXXX GE NY  F+ FLL    +L+Y    I  +L  IVAQ +L S  +  R +   +  S+S++  ++   +  L  LL L+  M VV+ GF  YHV+L+ +G TTNESAKWG    Y+    + + N
Sbjct:   58 GGRLLGCWSHTVDYVCNKPNPLLQALYLFLVIGGFIVFNFEAMPRIPNRYLG-EIHLYTSHVAVLFTLFTFVRASFSNPGRITPKT---------------------------------------------HAQFNHWPYDGFLYVKNAECSTCELPKPARSKHXXXXXXXXXXXXXXXXXXXXXXGEANYGKFMTFLLSTCFLLFYATYGIMAVLADIVAQHRLWSRTYVSRDSNERLPPSWSMVATFMFLRYTFLVMLLVLSAVMGVVVFGFFMYHVWLIFRGVTTNESAKWGGIHAYYSDRDRDFRN 321          
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Match: W4GLS7_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLS7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.810e-26
Identity = 117/353 (33.14%), Postives = 173/353 (49.01%), Query Frame = 1
Query:  268 MAGFLVVMGVNVILLGAAIY-LMFFADPDSPGFDGQAYRLVCEGVPRIFSAGLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFPRLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAGLYPHDGVVFVEG-FCATCRVSKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEENYRNFLLFLLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIGQYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAK-WGEA 1317
            MA   +V+ V  ++L   +  L++  DP+  G      R V + +P   S  L +V G      V +  +YVLN+PN +MQ  Y+ +V   +  FI+ G P LPN  L++ +    G   +AA + +F+  C TS GVV    ++                                           HA  Y  D V+++ G  C TC ++KPARSKHXXXXXXXXXXXXXXXXXXXXXVGE+NYR F+LF++ +S +  YG +++   L   V    L  +++    T +    +  ++ +Y++Y H  +C L  +   M   L  F  +H+YLV    TTNE  K W  A
Sbjct:   30 MADAAIVIAVVALVLPLGVVGLVYCVDPNKNGVLSSLRRFVLDTLPSWSSDVLLKVCGPSIHSDVVDAIDYVLNRPNPLMQVVYLHLVIGGYALFIVFGQPLLPNVYLSYNHVYYAGGAALAALV-TFLQVCTTSAGVVNARDSL----------------------------------------VQYHA--YEFDQVMYIRGNACKTCHLNKPARSKHXXXXXXXXXXXXXXXXXXXXXVGEQNYRYFVLFIVSNSLLCVYGGIILLYTLLGEVVTLHLFESKYINYDTGAPTDATVWIVARYIIYIHPVVCMLFFMCLVMGAALVAFAGFHLYLVASNRTTNEFFKQWAMA 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig135.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSG7_ECTSI8.200e-15560.66Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L085_9PHAE1.650e-14968.02Palmitoyltransferase (Fragment) n=1 Tax=Ectocarpus... [more]
A0A835ZHT4_9STRA3.010e-5937.02Palmitoyltransferase n=1 Tax=Tribonema minus TaxID... [more]
W7TTJ0_9STRA1.500e-3830.92Palmitoyltransferase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S2PPS5_9STRA3.720e-3429.33Palmitoyltransferase n=1 Tax=Leptocylindrus danicu... [more]
A0A8J5XF01_DIALT7.340e-2827.09Palmitoyltransferase n=1 Tax=Diacronema lutheri Ta... [more]
A0A7R9US56_DIALT7.960e-2826.99Palmitoyltransferase (Fragment) n=1 Tax=Diacronema... [more]
B8BUP3_THAPS7.740e-2725.35Palmitoyltransferase n=1 Tax=Thalassiosira pseudon... [more]
A0A2R5G4C4_9STRA2.690e-2635.81Palmitoyltransferase n=1 Tax=Hondaea fermentalgian... [more]
W4GLS7_9STRA2.810e-2633.14Palmitoyltransferase n=1 Tax=Aphanomyces astaci Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig135contigP-littoralis_Contig135:150082..161085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSG7
Preferred nameZDHHC4
PFAMsDHHC
Model size3322
Max annot lvl2759|Eukaryota
KEGG koko:K18932,ko:K20003
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0012505,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons8
Evalue1.56e-160
EggNOG OGsCOG5273@1|root,KOG1312@2759|Eukaryota
EC2.3.1.225
Descriptionprotein-cysteine S-palmitoyltransferase activity
Cds size1818
COG categoryL
BRITEko00000,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig135.38.1prot_P-littoralis_Contig135.38.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig135 150349..159848 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789621.8516755-UTR-P-littoralis_Contig135:150081..1503481680789621.8516755-UTR-P-littoralis_Contig135:150081..150348Pylaiella littoralis U1_48UTRP-littoralis_Contig135 150082..150348 +
1680789621.9624298-UTR-P-littoralis_Contig135:159848..1610851680789621.9624298-UTR-P-littoralis_Contig135:159848..161085Pylaiella littoralis U1_48UTRP-littoralis_Contig135 159849..161085 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789621.8611834-CDS-P-littoralis_Contig135:150348..1504341680789621.8611834-CDS-P-littoralis_Contig135:150348..150434Pylaiella littoralis U1_48CDSP-littoralis_Contig135 150349..150434 +
1680789621.87293-CDS-P-littoralis_Contig135:153565..1537701680789621.87293-CDS-P-littoralis_Contig135:153565..153770Pylaiella littoralis U1_48CDSP-littoralis_Contig135 153566..153770 +
1680789621.8856583-CDS-P-littoralis_Contig135:154472..1548131680789621.8856583-CDS-P-littoralis_Contig135:154472..154813Pylaiella littoralis U1_48CDSP-littoralis_Contig135 154473..154813 +
1680789621.8976-CDS-P-littoralis_Contig135:155070..1551941680789621.8976-CDS-P-littoralis_Contig135:155070..155194Pylaiella littoralis U1_48CDSP-littoralis_Contig135 155071..155194 +
1680789621.9178846-CDS-P-littoralis_Contig135:156164..1563111680789621.9178846-CDS-P-littoralis_Contig135:156164..156311Pylaiella littoralis U1_48CDSP-littoralis_Contig135 156165..156311 +
1680789621.929818-CDS-P-littoralis_Contig135:157178..1573221680789621.929818-CDS-P-littoralis_Contig135:157178..157322Pylaiella littoralis U1_48CDSP-littoralis_Contig135 157179..157322 +
1680789621.9393067-CDS-P-littoralis_Contig135:158258..1589151680789621.9393067-CDS-P-littoralis_Contig135:158258..158915Pylaiella littoralis U1_48CDSP-littoralis_Contig135 158259..158915 +
1680789621.9512825-CDS-P-littoralis_Contig135:159734..1598481680789621.9512825-CDS-P-littoralis_Contig135:159734..159848Pylaiella littoralis U1_48CDSP-littoralis_Contig135 159735..159848 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig135.38.1

>prot_P-littoralis_Contig135.38.1 ID=prot_P-littoralis_Contig135.38.1|Name=mRNA_P-littoralis_Contig135.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=606bp
MAGFLVVMGVNVILLGAAIYLMFFADPDSPGFDGQAYRLVCEGVPRIFSA
GLRRVFGDRCAGRVAECGNYVLNKPNRIMQGFYMVIVNFSFICFILEGFP
RLPNEVLTWPYHEAMGYVVMAACIRSFVAACNTSPGVVQVSLAVGTGAGA
AAGGVSDIPQGQGQGAGESGGAGANHARQAGGGGGGRHAGLYPHDGVVFV
EGFCATCRVSKPARSKHCRVCNVCVPRFDHHCAWLNQCVGEENYRNFLLF
LLIHSSMLWYGAVLIYGILKSIVAQRKLMSARFYRRSTKSYVRGSYSVIG
QYLLYHHGKLCGLLALAGTMAVVLTGFLSYHVYLVLKGTTTNESAKWGEA
KDYHRRLTKAWENGSLAPPAAPVAAAAATAAAASASGEPGASAGAAPEVK
TLVPVAAAGGEGRGGGVSGGDGGGDGDGGGGDGVDREGGGVDSEDGGYID
VEGDEDDAISSLAGAAAADNVDIAIDTTASSGTGLRRRGGGQRESGDISG
SGQQGFSGDTTAAATAAGAGAGAGAVAAEAEAEAEAEAEADAETEEDAPA
APHPGPLPDNIYDSGMWGNLMEVLFPRSLRKDGKDKALPYRDPFRLSHKP
YWVPA*
back to top

mRNA from alignment at P-littoralis_Contig135:150082..161085+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig135.38.1 ID=mRNA_P-littoralis_Contig135.38.1|Name=mRNA_P-littoralis_Contig135.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11004bp|location=Sequence derived from alignment at P-littoralis_Contig135:150082..161085+ (Pylaiella littoralis U1_48)
AGATGTAGCCCCCAGCGAAACCGGGCGGCGCACTCAATCACACTGAGACC ATCCTGGACGTGCAGAGGGAGAGGAAGGGAAAGAGAGAGGGTGTGCTACA TTGTGTTGGTCGACACTCCTGTAAAACATTCGCAAAGACAACGAACTTTA CGATCTAGTGGTGATTGGGGAGCACATCCACCAGCGGCACGGCAGCAGCG GCAGCGGTAGCGGCGAACGTCAAGCAGCAGCAGTTCTGCTGAAGCAGCGT CGAACACGGCAGATACCATGGCGGGATTCCTGGTGGTGATGGGAGTCAAC GTGATACTGCTAGGTGCAGCCATTTACCTCATGTTCTTCGCGGATCCAGA CAGGTGCGTTGCGAATAAAACTCGTGTGAAGTCTCGGTTGCCTCCATCAA GAATGCTGAGATATTCGAGGAATCTCTCCACCGGTTCCTCCCCTCCCGTC TCTCACTTCATCATATTGTATGTACGAAAGTATCATACAACAGGAGTGCA GCCCTCATCGTATTGCGCTTGATTGTTTGCCGTGTGTCTTGTGTGTCCGA GTATGGATACATATTGTAGCGAACCCGGTATGTATAAAGTGAGCACTCGC GCCTCCCAAGGGGACAAAGCTTCCGGGGTATGAAACGAGGGATAACGTAC AGCTACTTCGAAGTATATCGTACGTGGTTCCTGGTACCAGGTCTCGTACA CGACCATGCACCCCGTACCTTGAGAGATCATGTACAGCAGCTCCCAAGTA CAGCAGTTTCAGTATCCATCATATACCTGGGCATACCCGTCATCTCGTGT GTTCGTGCGCTCGTGTCAGATGGGCGGCAGGCGCGTGTGTACTACTTGCG AAGTTCTAATTTTGAAGCAACTACTGCTACTGTTGTGCTGTGTGTAGTCG AAAAACATGCCTGGTACGCAGTGGTACCCGGTACCAAATACCGGTGCGTC GTGGGATGGAAGATATGGTGGTGTTCGACAAAAAAGTGCAGCAGCATGAT ACTTCGAAGCAAAAGTAATTTCATTTGGTTTTTGTATCCCCACACGCATC ATTTGAGAAAAACACCCACACTGACCCACAGCAGCGAGTGTGTGTGCGGG GGAGAGAGGAAGATAGTGGGGAAGAGAGAAAAGAGAGACGATCCTGCGCA ACTTCGGATTAATATATTCATAGTCTGCTTCATCGTACGGACTCAGTCGG CTGGTACTGCTGTACTGCTGTATCATTCACGAGCAGGGAGAGCTGCGACT GCACGTTATGCGTTTGTTTTCTGGACCCAGAAAAACCTACCGGTACCTGG TATAGGTTTATTTACTTCTTTGTGTATCACACCATATCATCGATCCGATG TAATCTTGTTCCAAGTGAAAAAGAAAAAACGAGCGAAACTTGCTCGTTTG GCCCAGAGCAAAGCAGCAAAACGGTCAGTACAAGGTAGTTTTTGCGTTTG TTTGTTGCCGACATCAAACCTAAATCTGCTTCGAAGTAAGTCTGTATTGA CGAACATCGAGCAACAAGAGTGCCCAGAGCAACACAGGCGTCCCAGGGAC GGAGAGAGAGCGAATGGGAGCGCTCTCAGAGGCTGAAACGCGGGCGGCAT CATTGTCACAAGTGGCAGCAGGAGATGCTGATCTCTGTGTGCTAGCACGA GAGAGTAACGAGGAGAGCTGCACTCTACTTCTCGGCGAAATGAAAAAAAC TGCTGCCCTGTACTGCTGTGCCGCGAGAAAGAAGATGCTGCTGGGTATAC CTATATACGTACAAGTGTAATTGCTCCGTGAATAGTACTTTGTTAGTTCA ACATGTATGGTGGTTCGCCGTCGTGGTCGTTGTTGTTGTTGTTGTTGCTG TTGTTGTTGTCGTCGTCCTTCTCGTTGTTTTTGAGTTTGCTGTTGTCGTC GTCGTTGATCAGTCCGGCACCGACCAGCTCATCTGTTACACACAAGATTT TATCTGCAGGAGAATCTTACAACGTTTGACAGGGACCCAGGTACAGACAG CAGTATATTTTTTCCAACATTTTCGGACGCTGCTGCAGCCTGTCACCACT GAAAGCGTCTCCTGCTATCGCATGAGTCAACTGTACGGACAATATAGAAG AGGTACTTAGTACCTCTTTGGGTAGATAGCCTGTGACCACGGAAAGCGTC CCCTGCTATCGGATGAGTCGGCACTACGGACAATAGAGACGATGTACTTA GTACCCTTTTTGGGTGGGTAGCCTGTGACCACGGAAAACGCCCCCTACCG GATGAGTCAACTATTCGCGCATTTAGAAGAGGTACTTGGTACCCTTTCTG GGTCGGTAGCCTGTGACCACGGAAAGCGTCCCTCACCGAATGAGTCAGCA CTACCGACATTAGAACGTACTGAGTAGAGATTGGAGCGGATTTCGGCGAA GACAACGCACAGCAGACACCGCGCCCTTCGTCTCTGCCCTGCTGTGGGTA GAAAGGGTAGTGCTTGAAGACAGAAGGTAGAGTCGAGGATGACGAGATTG TTATATTATATTTCTTGCATCTCATTTGATCTTGCTGTGTAGGAAGAATT GGCAGTAGGACGTACATAACATACATGCACTCGTAACTTTGATGCAGACA AACGGGTCGTGACGATTGTAAGCTTGGAATATTTCTCCGACACGACAACG TGTAATATCTGAGAAAATTTTCACAAATTACCGGTGTTTGGTTTGAGGGA GGATGAAGTTCGTTGTTCGATCCCTTGTTGTTCCTTACAACACAGCAGCA GTACGGCACGGTGTGATGTGCACATCTCCTTCATCTGACATTTCATCATG GTACATTTATCTTTATCTATTGACACATGTATTTGCTGCATCATACAAAT CGTTTCTGGTGTACGTTGGTGTTTTGCCACGATCGCAGAAGGCCTTTCCT CTCTCCCTCTCTCTTTCTCTTTCTCTCTTTCTCTCTCTCTGTCTCTTTTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCCCCCTCCC CTCCCCTCTCTCTCTCTCGCCCTCTAAGTCCCCCAACCTTCCTTCCTTCC TTCCTTCCTTCCTTTCTTGCTTCTTCAGTCCGTGCCTCCAGTCTTTAACG CAAGAAAGGTCAAGACCGAGTTTACGGTCAAGGTCGAAACAACGATCTTT CGGCCGTCCGTCCGCACGCATGAAACGCTCAACTTTCGTCGAAGCAAACG AATCGTTCACATCGCTGCTGTCGCTTTACTACTGTAAAAAAGGGTCACAT TTTCATGTCTTCCTTGCTTTTTTACCCTGGCTGAGGGAGGCGGGGGTCCT GGCTGAGAGAAGTAGAGATGCATGGGATCCAAAGCGATTTTTTTCTACTC CTCATGTCCTTCCCTGCTTTCTGTTTTGTGCCGCGCCTGCGTCTCTGCCT CTGCGTGCGCGTGCGCGCGCACGCTTTGAAACACCCCCTCCTTAAAACAC ACACACACACTCACACACACACACACACGTCCAGTCCTGGATTTGACGGG CAGGCGTACCGCCTCGTCTGCGAGGGCGTCCCGCGGATTTTCAGCGCGGG CCTGAGGCGAGTTTTCGGCGACCGCTGCGCCGGGAGAGTCGCAGAGTGCG GCAACTACGTCTTGAACAAGCCCAACCGCATCATGCAGGGGTTTTACATG GTGATCGTCAATTTCTCCTTCATTTGCTTCATCCTCGAGGTGTGTGTTGT GTTGTGGTGTGGCGTGGCGTGGCGTGGTGTGGTGTGGGGGTGGACGATAA CGACAATACAGTAGTGACATGAAGGGACACATTTAGTGAGAAGTTTAGCT TTTATAAGGGAGAGGGGGCGGGGGGGGCGTGGGGGGTTCTCCGTTTAGAC GTTACGCCAACGAAGGGTTGAGGGTTTCGTGGCAGGTGCCGAAATGTACG TCCCCACAACACGCGTCCTCAACTCGCTGGGCCCACCGCCCCTGGCATGT TCAACTCAATCCCATTCGGCTATCTTAGCGCCGGTACGTATTTTTTTCGT CTCGATCGGCGATACAGTACGAATCATGTCCCCGCACCATAAAACGACGC TTATTATATGTGCCGACGTGCAACCGGTCCGATCGAATCCAAACTAATCC AAGTTTTTAATTTCACTAACGATAGGCATGCAGGCAGACAGATAGGTGCT GCTGCTGCTGGTTCACAGAGAGATACGATGATGTCGCGACTCGCTCACAA AAAAAACGCAAGACAAGCTATAAATAGTACTCGAAGCGAGAAAATAATTA CCTTTTACGTTGATATGTCCGGTTGTCCGTTCACTTTTTTTTTGGCGAAT ACCCGACCCTAATCCCAATCCCAATCCTAATCCTAATCCTAATCCCAATC CCAATCCCAATCTCACTCCCAATCCCAATCCCAACCGGCAGGGGTTCCCC CGCCTTCCCAACGAGGTCCTCACGTGGCCCTACCACGAGGCCATGGGCTA CGTAGTCATGGCCGCGTGCATACGCTCGTTCGTGGCGGCGTGCAACACCT CTCCGGGAGTCGTGCAGGTGTCGTTGGCGGTGGGGACGGGGGCGGGGGCG GCCGCCGGAGGCGTGTCGGACATCCCGCAAGGGCAAGGTCAGGGGGCGGG GGAGAGTGGGGGGGCTGGCGCTAACCATGCCCGGCAGGCAGGGGGAGGGG GAGGGGGGAGGCACGCTGGGTTGTATCCGCACGATGGAGTCGTGTTTGTG GAGGGGTTCTGCGCGACTTGCAGGGTGTCAAAGTGAGTGAACCTTTTGTG GCGATAGGAAAAAGCCGGTGTTGCTATATACCTGGTACGATAGAGGCGTC CTTTTCATCTCTCTCTCTTTCGCGCTCTCTCCCTCTCTGCCTGCCTATAC CCGCCGTCTTGGGTCTGGTCTGGTCTCGTCTGCTTCTGCGAAGAAAAAAA TGTATATGAGTTCGCGTGACCAGCCAACAACAACCCAACCAACTGATTCC ATTCCACTTGAACCTGAACTTGAACTTGAACGCGGCTAGGCCGGCACGAT CGAAGCACTGCCGGGTCTGCAACGTGTGCGTTCCTCGGTTTGACCACCAC TGCGCCTGGCTGAACCAGTGTGTCGGCGAGGAAAACTACCGCAACTTCCT TCTGTTCCTCCTCGTGAGTGCCATCCTCCCCTGTACCCTTCCTCTTCCCA TCGAGGATAACTTCTGCAAATTCCCACTGTTCCTGATTCTGAGTGTCATC CCCTACCTCTTCCGTTCCCTTCCCCTCTTTGAGGAAGGACACTTCCCTTA TTCTGTTACTACTTGTGAGAGACCCCCCCCCCCCCCCCCTGTTCCCTTCC CCTCTCTCGAGGAAATCTACCGCAACTTCCTTCTGCTCTTGCTTGTAAGG GCCACGCACCCTCTCCCCTTTCCCATCCCCTCCCCCTTCAAGTACCAGAT TTTCATTCTGTTTCTGCTTGGTTTGTTTTCTTGTTCTCTTGATATTTCGC GACTGCCAGGTTGAAGTGGATTCCTTTTTTTATGTGTCCGGATCTTGTCT TGTACCTGGTGCTTATTCCCTTCTTTTTTTCCTTTGTGCTTGCATAAATA GCATCATACCCAATACTTCAGTTTTTCATTTGTGCTAGCCGGCGAAGCAA AAATACTCCAATGTACTAAAATCCGAGTCCAAACGGAGGTGGAGAGGGGT CGCTGTTGGTCGAAGCAACATTTAGTGAAGTGCTAAGCATGTACAGCGGA AACGCCCTCTTTTGCATTCTGTGCTGTGCAAGCCGTTCAAGCTGTGTCCC CCACTACTGGAGTTCCTCCATTGTTGTGCTCCGAAACTGGAGCCACTTCC TTTTCTGTACCTTTGGCACAGAAAGAACAAACGAAAAGCTGCTTGCGCGC ACCACGTACTTGAAATAATCATTGTTGTCGTTCTGAACACACACATGAAA CGAAATTTCTTAAGCGCACGCGCACAAAAAGAAGAAAATCACAGACGACA ACACGGCAAGTTAGGTGTTCTTTTGTGCTACTGTGCTGATCTCTCTCTCT CTATCTCTTCTTGTTTTGTTTTTTGCCCTTCCCGCTTGCAAATTGTTTTC GGTTGCTCTGTTTTCGCCATTGTGCCGGCACAGATCCACAGCTCTATGCT GTGGTATGGTGCGGTGCTGATCTACGGCATCCTCAAGTCTATCGTGGCTC AGAGGAAGCTGATGAGTGCGAGGTTTTACCGGAGGAGCACAAAGAGCTAC GTCCGCGGCAGCTACTCCGTCATCGGACAGGCAAGTCTGGTAGACGGGCG GACGGATAGGCAGGGAGGTAGGTAAACAGACAGGCAAACAGACAGACAGA CAGCAGGTAGGCAGGCAGGTAGACAGATAGACAGGCAGACAAACAGACAG ACGCCAAAATACCATAGTCGATAAAACCAGGCATGGCAGCCTTCATGCAG CAGCATTGTCGGCAGCAGCAGCAGCTGCAGCAGCAGGAGCAGAAGCTTTG CAGTGCTTTATGTGGTACCATGTACATGTAGTCTTTGTCTCCGGTTGTGG TTTTGGTTCCTTTGGTTTGGTTTGGTTGATGAGTTGCACGAAACGCGCAA TTCACCTTGCCTGGCGGCTACAGGTATTTGATTTGATGCATACAGCGGCA GCGAGCAGCGTTGTGATGCGGAGATGTTTTTTCTCGATCATTTTTTGGAT TTTTAAAATGTTTTTTTTTTTCCGTTTCGCCCTGGCTTTTGTTTTTGGTC TCTTGTTTTGCTCTGCGTTGCCTCCTCCTGCCTGTTTGCTCTGCGGCGCA TTTTGTTCGCATATTTGTTTTTCTGCCATGGTTTGTTTATTTGTTCAGAG CCCTGCTGCTATGTGATTTGCCAAACACTTGTAGCAAGTGTGGAACGGAT CACAACAGCACGGCAGTACGGACGAAATAAGGTGGCATGCGAAGTATATG CAGAAAACGAAGTACTTGTACAACGTATATCGCACTTTTACTGCGTATTG TTTTCATTTTTTGGTGTGGCTGGACAAAAACTGCACGTTTCCTGTGTGCC TGTGTACCAAGCAACAATTATCTCCCAACACCAACCAGCAGCACCTCCCG CGAACGTGCGTTTTTTTGTTGAATACACCGCGGCTGTACAACAACAGTAC CTTTTGTACCACCACGGCAAGCTGTGCGGACTCCTGGCGCTGGCGGGGAC CATGGCGGTGGTGCTGACCGGCTTCCTGTCCTACCACGTGTACCTTGTCC TCAAGGGCACCACCACCAACGAGAGCGCTAAGTGGGGCGAGGTGCGTGGG GCGGGTGATTGGGTTGACGTTGACGATGGCAGGAACGTGGAGGATTGATC TTCTCGGGGGAAGTCGAGGGTGGACGTTTAAAGTCCTGCGGCGTGCCATC GCGTAGCAGGCATCTCAAGGAGGGAATGTACGATATCTTCAAGAGACGCG TGCATGATATCACATGCGTATGTTGGTACAGCGTGTTTTGTGCGTTTGCA ATGGCGAGGGTCGACAGTTACTATCCTTCCACCGTGTCATTGTGCAGCAG GCGTTTATCAGGAGGGACCTACACCCTTTGAGAGGCGTATGCAGGGTAGT TTGATACAAGTGTGATACGGCAGGTCGTTTGGCAGGGGGGGTGGGGCTGG GAATGTTGAGCTTGTGGCCGTTAATGTTGTCGTGGGAGCCGAGGAAGGGG GATAAGGGGGCGCTAATATGTGTCGAATATTTTTTGCCGTGGGTGCGGCT GCTGTCACTAATTTTGTGTTCGGTTTTGTACCCATCTGCAAACACGTGCT GGTTGGTTCAGGCCATGTGTGAAGGCTCCTCGGAAAAGAAGGGCCTTCCT TCCACTCCGCTACTGCTGAATGGCACAGGCGGCGCCAGCGAAACAGCAAT GCTCTCGTGCAGCAGAGTAGCAGGAGGGTGCGATGTGCGCGGGACGGGAG GGATGGGTAGAGCGGGGCGGGGTGGCATTTGCTACCGTTGATTCATCTGG GGCGGTGTCATTTACCACGCAGCTGTGGGAACGATGCTATACGTGTTCCA TCGGCAAAGCAGCGTACAAACGTCGTGCCGTGCCGCCTCGCGACCCTCCG TTCGCTCCACTCCGCTTCACTACGCGCCTATTTGTTTTTTCTACACGAGC ACCGCTGCCCGTCAACTCTGGACAGAAAATGCCACCCTCTCTCTTCCTCA CGCGTTACTTACTCCCCGCACGAACAGGCCAAAGACTACCACCGACGCCT CACGAAAGCCTGGGAAAACGGGTCTCTGGCCCCCCCTGCCGCCCCCGTGG CCGCCGCTGCCGCCACCGCCGCCGCCGCCAGTGCGAGCGGCGAGCCCGGT GCCTCGGCAGGAGCAGCGCCAGAGGTGAAAACGCTGGTTCCTGTGGCGGC GGCGGGGGGAGAGGGACGAGGAGGGGGAGTAAGCGGCGGCGACGGTGGCG GCGACGGCGACGGCGGTGGTGGTGACGGCGTCGATAGAGAAGGTGGCGGG GTTGACAGCGAGGACGGAGGGTATATCGATGTGGAAGGCGACGAGGACGA CGCCATTTCCTCTCTAGCTGGGGCTGCTGCTGCGGATAATGTAGATATTG CCATTGACACTACTGCCAGCAGCGGGACCGGCTTGAGACGGCGAGGAGGA GGTCAAAGGGAGAGTGGCGACATCAGTGGCAGCGGGCAACAAGGTTTTAG CGGTGATACGACGGCGGCGGCGACGGCGGCGGGGGCGGGAGCGGGAGCGG GGGCAGTGGCGGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCA GACGCAGAAACGGAAGAAGATGCGCCAGCGGCGCCACACCCTGGGCCTTT GCCGGACAACATCTACGACAGCGGGATGTGGGGGGTGAGAGACGAACGGA ACCCGCGCCCGTTCTTCGTTTCGTTTTTATTTGTTTGTTTTTTTGTTTGT TGGTTTGTGGGAAGCAAGAGAGGGCACTCGTGGCCACGCAACCGCAGAGG GAGAGAGGCAGTGACGGAGGGACGCGAGGGGAGTGGGATAGGTGGGGCGG AGAGGCAAGGCCAGGCCGAGCTGGCACTCTCTCACGCTTGCAGAGCGGCA CGCACCCGGTGTGAATCTTGCATCTTGGAAGAACAGTATGGCGTTACCCT CGTGACGCGTGTTAGTTGAACCAGCAGCGTCCCGAACATACGATACCCAG GGCAGCTACACAGATATTCGCCGGACAATGTCTTTGCACGAATGATGTCA TGCGGGGGGTGCGCGAAGAGGGCGAGAAAGAAGATTATCGACACCCACTT GCGGGGCACGTCGTGCGCTTCGCACCCCAACTTGTCACTTCCGAGGAGCG CAAGGTCAAAAAACCTGAATCCCGTGCGGTAATTTTTTTCGTGCGGGGTG CCCGGAATCCCCGGGGGGTACATGTCATATCATAGTTTCTTCCTTCGGCC GCCGTGGTGTGATTTCCTTTTACATCTCGGGGAAAAAGCGTGCCTGTGGT GTTGTGTGTGCTTGTGTGATATGATAAGGCCGTGTGTGTATGCATGTTCC ATGAAAATGACCTCTTTGAAGACATGTGGAGTCATGCCACCTCGCCACCT CCTCCCTTGCCTTTTTCTTGCCCCTTCTCCTTCACCATCCCCCCCCCCCC CCCCCGCACGCTCTCACTCCCGATTTTGTGTTTTCGTTTCTCACCGCGGG CAGAATCTCATGGAAGTCTTGTTCCCGAGGAGCCTCAGGAAGGACGGGAA AGACAAGGCCCTCCCGTACAGGGATCCCTTCCGCCTCAGCCACAAGCCCT ACTGGGTGCCCGCGTGATGACACCCACAAGACGGACGGACGTCCAACCCA CCAGGCGCAGGTCCAGCCGTCCGAGCACCCTCTCTCTCTGTACGGGGGCC GTATGTAGACCACAAACGGATTATCATTTTTTTTTCGATAAGGGAAAGGG CGCTTGGTGCGCTTTGAAGGGGGGGAGAGAGGAAAGGTGGCGTCTGTGGT GTGAATGAGCGGCGCGTTTCCGTTTTCTCGGTTTTGTTCTCGGTTTTGTT TGTGGTTCTTCATCCGGTCTCTCCCGTTTGCATGATCCTCATCCATCACC TTTCGGTTTCATTTTCCGTCAAGTGCGCATCATATATAAACACGTTGATG ATGTTTTGTGAGGAGTCCTACTTCAACTTGAAGCCACACTGCTCTTCTGG CGTGGGCAGCAGAAGTTAAAAGAAAAAAAAAGTTCCACTGAACCTCACCC TCGTGCTTCCCCCAAAGTCACAACGACATCGAGCTCGGCTCCCGTGCGGC GGTGTGATGGTCCATTTTTTTCTTTCAGTCTGTGTGTGTCTTGTGTGTGT CTGCGGCGTCCAGGGCGGGGGAAACCCTACACTATTTGTTCGGATGTGAC GCACAGGGTATCATAGGCGTGCGCCGAAGGGCTAAAATCATACCACAGCG CGCGTTTGTGGCGGCAGAATCTCCATCATGCGCAAGGAATTGTTTTCTGT CCTGTCCTGTCCCCATTTTGCAAGGGCGTCCGAGGGGGTCAGAGCAATAC GCTCCACCACCAGCAGGTTGGTAGGTGTCTGGTGAAAAGCCCTCGAGTGT CACGAGAGACCACACGGGGTGGCAATAGATCTCTCCCGCAGACAGCACTC ACGCGTTTGGTGGGGGAGGAATTGAGAGTTTGCTTCGGGGCGTCTGCCTG CCTTTCTCTCCTCGAGTGCGGGGCGGGACATGCATTTTTTTGGTCTCGAG GCTTCCTGTTGTCTGCGGGTGGGCTCTCGCTCTGTTGGCTGGACAGTCCG GCTGCCAGGAGACTCACTCGCCGAGCAAGCGCTTCACTTTTGCTTTTGGT TTAGTGGTCATGGTTTAGGGCGGGCATGGCGCACGGCCTGGTGCAAGTAC CGTTAGCGTACTACTTCTGTATGATGCTTCGTACACCATGGTCTTTGGGC CTCGCGGTCGTCCAAGCAGAAACTTCGAAAAAAAGGGCTGACGAAAACTT GTTGCAAGAGACCTAAATATTAATCAAATTGCTCGTTCGCACAGAGAAGG CGGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig135:150082..161085+

>mRNA_P-littoralis_Contig135.38.1 ID=mRNA_P-littoralis_Contig135.38.1|Name=mRNA_P-littoralis_Contig135.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1818bp|location=Sequence derived from alignment at P-littoralis_Contig135:150082..161085+ (Pylaiella littoralis U1_48)
ATGGCGGGATTCCTGGTGGTGATGGGAGTCAACGTGATACTGCTAGGTGC
AGCCATTTACCTCATGTTCTTCGCGGATCCAGACAGTCCTGGATTTGACG
GGCAGGCGTACCGCCTCGTCTGCGAGGGCGTCCCGCGGATTTTCAGCGCG
GGCCTGAGGCGAGTTTTCGGCGACCGCTGCGCCGGGAGAGTCGCAGAGTG
CGGCAACTACGTCTTGAACAAGCCCAACCGCATCATGCAGGGGTTTTACA
TGGTGATCGTCAATTTCTCCTTCATTTGCTTCATCCTCGAGGGGTTCCCC
CGCCTTCCCAACGAGGTCCTCACGTGGCCCTACCACGAGGCCATGGGCTA
CGTAGTCATGGCCGCGTGCATACGCTCGTTCGTGGCGGCGTGCAACACCT
CTCCGGGAGTCGTGCAGGTGTCGTTGGCGGTGGGGACGGGGGCGGGGGCG
GCCGCCGGAGGCGTGTCGGACATCCCGCAAGGGCAAGGTCAGGGGGCGGG
GGAGAGTGGGGGGGCTGGCGCTAACCATGCCCGGCAGGCAGGGGGAGGGG
GAGGGGGGAGGCACGCTGGGTTGTATCCGCACGATGGAGTCGTGTTTGTG
GAGGGGTTCTGCGCGACTTGCAGGGTGTCAAAGCCGGCACGATCGAAGCA
CTGCCGGGTCTGCAACGTGTGCGTTCCTCGGTTTGACCACCACTGCGCCT
GGCTGAACCAGTGTGTCGGCGAGGAAAACTACCGCAACTTCCTTCTGTTC
CTCCTCATCCACAGCTCTATGCTGTGGTATGGTGCGGTGCTGATCTACGG
CATCCTCAAGTCTATCGTGGCTCAGAGGAAGCTGATGAGTGCGAGGTTTT
ACCGGAGGAGCACAAAGAGCTACGTCCGCGGCAGCTACTCCGTCATCGGA
CAGTACCTTTTGTACCACCACGGCAAGCTGTGCGGACTCCTGGCGCTGGC
GGGGACCATGGCGGTGGTGCTGACCGGCTTCCTGTCCTACCACGTGTACC
TTGTCCTCAAGGGCACCACCACCAACGAGAGCGCTAAGTGGGGCGAGGCC
AAAGACTACCACCGACGCCTCACGAAAGCCTGGGAAAACGGGTCTCTGGC
CCCCCCTGCCGCCCCCGTGGCCGCCGCTGCCGCCACCGCCGCCGCCGCCA
GTGCGAGCGGCGAGCCCGGTGCCTCGGCAGGAGCAGCGCCAGAGGTGAAA
ACGCTGGTTCCTGTGGCGGCGGCGGGGGGAGAGGGACGAGGAGGGGGAGT
AAGCGGCGGCGACGGTGGCGGCGACGGCGACGGCGGTGGTGGTGACGGCG
TCGATAGAGAAGGTGGCGGGGTTGACAGCGAGGACGGAGGGTATATCGAT
GTGGAAGGCGACGAGGACGACGCCATTTCCTCTCTAGCTGGGGCTGCTGC
TGCGGATAATGTAGATATTGCCATTGACACTACTGCCAGCAGCGGGACCG
GCTTGAGACGGCGAGGAGGAGGTCAAAGGGAGAGTGGCGACATCAGTGGC
AGCGGGCAACAAGGTTTTAGCGGTGATACGACGGCGGCGGCGACGGCGGC
GGGGGCGGGAGCGGGAGCGGGGGCAGTGGCGGCAGAAGCAGAAGCAGAAG
CAGAAGCAGAAGCAGAAGCAGACGCAGAAACGGAAGAAGATGCGCCAGCG
GCGCCACACCCTGGGCCTTTGCCGGACAACATCTACGACAGCGGGATGTG
GGGGAATCTCATGGAAGTCTTGTTCCCGAGGAGCCTCAGGAAGGACGGGA
AAGACAAGGCCCTCCCGTACAGGGATCCCTTCCGCCTCAGCCACAAGCCC
TACTGGGTGCCCGCGTGA
back to top