mRNA_P-littoralis_Contig1346.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1346.5.1
Unique NamemRNA_P-littoralis_Contig1346.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A7S6PV13_9STRA (Clp protease ATP binding subunit n=1 Tax=Pedospumella sp. Jangsampo120217C5 TaxID=2782409 RepID=A0A7S6PV13_9STRA)

HSP 1 Score: 812 bits (2098), Expect = 9.570e-279
Identity = 530/967 (54.81%), Postives = 609/967 (62.98%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYLLYHKAYMIK*KF-LY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIENNALF*RALG*MG-YMDMIFKIRCVVI*ENCEQFAL------RRVKIIFVRKISALKTLTAMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQRNY*KFKIKF*NSNVRC*IVHNLCIAWLLFY----RGR---S*IYDEC*GSRTC*ART*DGRF*WA*NVSLNEKFENCWPILRNTFNPFQVWK--------HKAF*FRKY----IT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKLFILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRRNQRVAPAENCIIGGTENVSEQENVSNYNDEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC--------ISTFKTRRVEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVTKKGRVIKIVLNEYNQVV 2911
            EKELCELMEILVRRQKNNPVLVG+AGVGKTAIVELFA+KIVNNLVPFILEGRTLISLDLARIVAG +      ++  KVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPI VKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLK+EAFRRGDI TEYIFQELENGYRNFLLRWIEDP+SIEEV +++  +     ++   K K  +      + F    +R   +K  K   F  + NE+L  KL N+IKSGAK+ L+ YRI+LFLF+ LI+NNA F   L     Y   I K  C  +  N  + +        R +      I + +    +   L+     +K + ++    K     + +      K    +S ++        I  LL Y     GR   + I D     R        G         + E   +   I   + +  +  K        HK    ++     I  A  R+R G       N  I +            F+     G  K ++ KALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSP       +         K    +    +++KAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKK R ++ A   N  I   +N+ E+E    Y DEYSGPLEFLGSPIND+F    +          F   +   S EK  +         G       ++ +++ LK  V  R+S      +             K   + K      KSVADRVQ KQIEL VDENVK KLTREGYNPMFGARPLRRLVTKYVEDL+SESLLKN + KKGRVIKIVLNEYNQVV
Sbjct:   70 EKELCELMEILVRRQKNNPVLVGDAGVGKTAIVELFASKIVNNLVPFILEGRTLISLDLARIVAGSRYRGEFELRFQKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPIRVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKMEAFRRGDIPTEYIFQELENGYRNFLLRWIEDPQSIEEVNDQENTILSPISQSLFDKMKISVLKRVDDLLFSSNNIRKITKKIQKIQDFTSTQNEQLNSKLNNNIKSGAKLELSIYRISLFLFNDLIKNNAAFSTNLESGDVYKFNILKQTCTHL-RNLRKNSFVNGGNYSREEDFCSEDIESYEESFEILSELE-----EKRIDVFKDFLKNLKPLLRKGIIESLKS---SSEIQMSDAELSTIYALLGYYSTEAGREFMTNIEDPELIKRARKTGDFSGLKKRITQREIRELLADITGIPLQSISSLETQKLSNLESTLHKRVIGQEEAISAIAKAIKRSRLGIQ---NPNRPIAS------------FLFCGPTGVGKTEVTKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPPGYIGYDEGGQLTDSVRKKPYSVVLFDEVEKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKGRLKKTAQVGNSTISEAKNLLEKEKTPIYEDEYSGPLEFLGSPINDSFLADIQTQLQFEFEKSFRNLKEYSSLEKSLKNA-------GDANALEVEQDALKELKSAVLDRLSTMFLPEFLNRLDDIIVFQPLKPEELRKICDIMVKSVADRVQSKQIELHVDENVKLKLTREGYNPMFGARPLRRLVTKYVEDLVSESLLKNPLIKKGRVIKIVLNEYNQVV 1005          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A0D3MKN6_9STRA (ATP-dependent Clp protease ATP-binding subunit ClpA-like protein n=1 Tax=Ochromonas sp. CCMP1393 TaxID=420556 RepID=A0A0D3MKN6_9STRA)

HSP 1 Score: 674 bits (1739), Expect = 6.380e-225
Identity = 451/982 (45.93%), Postives = 571/982 (58.15%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYLLYHKAYMIK*KF-LY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLF--------SCLIENNA--------LF*RALG*MGYMDMIFKIRCVVI*ENCEQFALRRV---KIIFVRKISALKTLTAMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQR--NY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRGR---S*IYDEC*GSRTC*ART*DGRF*WA*NVSLNEKFENCWPI---------------LRNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKLFILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRRNQRVAPAENCIIGGTENVSEQENVSNYNDEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHFVI*RIQ*S*EK-LKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC--------ISTFKTRRVEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVT-KKGRVIKIVLNEYNQVV 2911
            EKEL ELMEILVRRQKNNPVLVG+AGVGKTAIVELFA KIVNNLVPFILEGR+++SLDLARIVAG +      ++  +VLDEVL QPN+IIFIDEIHNIGG GSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPI V EP+I+DTVNILYGLRPSLEAFHNVEI P ALRLAAEL+SRYIYDRFLPDKAIDL+DRAAAKEVI+LTNVTEGSV+S+VVNA LN LG+L++EAFRRGDIA E+IFQE+EN YRNFLLRWIE P  + E+EE    L     ++   K +  +      + F     R+  +   +     +  NE++  K  ++I       ++ YRI+LFL+        +C    N               G +G +  ++ +R  +I  N   F  R V   K            L+ ++++          + ++ +  +     + +      K+  +   +     +V+ L + +     GR   S + D     R        G         + E   +   I               L  T +   + + +A      I  A  R+R G       N  I +            F+     G  K ++ KALAVSMFG+ESDMIRFDMSEFMEKFT+SRLIGSP       +         +    +    +++KAHPD+LNVLLQILEDGRLTDSQKRLV FENTV+IMTSNAAAEEIQQIIK  R  +    +                  Y D+YSG ++FL SPI +NF    K    +     F   +     EK LK+    K  +N T      ++++++ LK  V  R+S      +             K   + K      K VA+RV+ KQI L VD+ VKSKLTREGYNP+FGARPLRRLVTKYVEDLISE++L+N +T KK R+IKI L++ N+V+
Sbjct:   56 EKELLELMEILVRRQKNNPVLVGDAGVGKTAIVELFATKIVNNLVPFILEGRSIVSLDLARIVAGSRYRGEFELRFQRVLDEVLAQPNIIIFIDEIHNIGGTGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPIKVNEPSIEDTVNILYGLRPSLEAFHNVEILPGALRLAAELASRYIYDRFLPDKAIDLIDRAAAKEVIRLTNVTEGSVVSAVVNAGLNNLGALRVEAFRRGDIAVEFIFQEIENSYRNFLLRWIETPSEVPEIEEISQPLLSPISQSLFDKMRISVLKRADELLFASNNPRSIVRPMQRIRDLSIEKNEEIYEKFIDAINERKLPKISAYRISLFLYRGWTEINRTCSTRKNMEAPEVYYNTLTETAGQIGMVAYLYNLRTNII--NDPFFFSREVDFCKEDIEXXXXXXXLLSELEEI---------RIEVFKEFLRDMKPLLRKGMIQSLKYSSEIPMTEQDLSLVYTL-LGYFSTETGREFLSNLEDPELIRRARKLGDFSGLKKRITQREIRELLADMTGIPIQSISNVESKKLVNLEATLHKRVIGQEEAI---SAIAKAIRRSRLGIQ---NPNRPIAS------------FLFCGPTGVGKTEVTKALAVSMFGAESDMIRFDMSEFMEKFTVSRLIGSPPGYVGYDEGGQLTDSVRRKPYSVVLFDEVEKAHPDILNVLLQILEDGRLTDSQKRLVPFENTVIIMTSNAAAEEIQQIIKNNRTSKNTKLDEXXXXXXXXXXXXXXXXXYEDDYSGAIKFLESPITENFLTDIKEQLQVEFEKSFRNLKEYELLEKDLKKT--SKVKQNST-----DEQQTLKDLKGAVLERLSTMFLPEFLNRLDDIIIFQPLKPEELRKICNIMVKDVAERVKSKQIILNVDDKVKSKLTREGYNPLFGARPLRRLVTKYVEDLISENILQNPITTKKARLIKIQLDDNNEVI 1000          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A3G2QZK9_9STRA (Clp protease ATP binding subunit n=1 Tax=Mallomonas splendens TaxID=52552 RepID=A0A3G2QZK9_9STRA)

HSP 1 Score: 640 bits (1650), Expect = 1.690e-211
Identity = 433/972 (44.55%), Postives = 573/972 (58.95%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYL---LYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSA--NEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIEN---------------NALF*RALG*MGYMDMIFKIRCVVI*ENCEQFALRRVKIIFVRKISALKTLTAMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQR--NY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRGRS*IYDEC*GSRTC*ART*---DGRF*WA*NVSLNEKFENCWPILRNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKL--FILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRRNQRVAPAENCIIGGTE-NVSEQENVSNYN---DEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC--------ISTFKTRRVEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVT-KKGRVIKIVLNEYNQVV 2911
            EKEL ELMEILVRRQKNNPVLVG+AGVGKTAIVELFA KIVNNLVPF+LEGR+++SLDLARIVAG +      ++  +VLDEVL QP++IIFIDEIHNIGG GSAEGSLDAANILKPVLSRSGFQCIGATT KEYQ+IEKDPALNRRFQPI VKEP+ID+TV ILYGLRPSLEAFHNVEI P A+RLA EL+SRYIYDRFLPDKAIDL+DRAAA+EVI++TN+TEGSVI+S+VN++L+ +G LK+EAFRRGDIATE+IFQE+EN YRNFLL WIE+P +I E + +K+L  +   L+H   M   K +  +E M    F   R   Q         LS+  N+++   L +SI +     L+ YRI+LFLF+  I+                N L  R L     +  I++ R   + +N E              I   +  T +   ++     +K + ++ +  ++    + +      K+   F  SN    I+++L + +     G + +++         AR      G         +++   +   I  ++ +  +  K          T    R  G     C     I+      +  N  +  F+     G  K ++ KALAVSMFG+E+DMIRFDMSEFMEKFT+SRLIGSP                 +    +    +++KAHPD+LNVLLQILEDGRLTDSQKRLV F+NT++IMTSNAAAEEIQ+II   R+ +    E       + N + + N S YN   D+Y+GP++FL SPI +NF         +   N F   +      K   +       N      +   R +  LK  V  R+S      +             K   + K      + V++R++ K+I L VDE VK KL+REGYNP++GARPLRRL+TKYVEDLISE+LLK+ +  +K R ++I L   +QV+
Sbjct:   63 EKELLELMEILVRRQKNNPVLVGDAGVGKTAIVELFATKIVNNLVPFVLEGRSIVSLDLARIVAGSRYRGEFELRFQRVLDEVLAQPHIIIFIDEIHNIGGTGSAEGSLDAANILKPVLSRSGFQCIGATTGKEYQRIEKDPALNRRFQPIKVKEPSIDETVYILYGLRPSLEAFHNVEIMPGAIRLAVELASRYIYDRFLPDKAIDLIDRAAAREVIRITNITEGSVIASLVNSALSNVGKLKLEAFRRGDIATEFIFQEVENAYRNFLLTWIEEPLNIPEEKPQKILSPISQSLFHTMRMSVLKRV--DELM----FSSSRPRYQTEIVERKTDLSSVKNKEIITDLLSSITNYQTPTLSLYRISLFLFTEWIDAKEFQSFSPGLKRSFLNTLL-RILSKSSMLSYIWEFREKTL-KNPELVLFDLTDDFHSDDIERYEKKTELLSEIE-----EKRIIVFQEYLEELSPLLRKGIIESLKYSSDFKLSNEDLKIIYSL-LGYFSTQEGSTYLFNLDSPDLIRRARKLGDFSGLKKRITQKEISDLLSDMTGIPIHSISNVESQK-----LLNLETTLHKRVIGQEEAICAIAKAIRRSRLGIQNPNRPIASFLFCGPTGVGKTEVTKALAVSMFGAENDMIRFDMSEFMEKFTVSRLIGSPPGYVGYDDGGQLTDSVRRKPYSVVLFDEVEKAHPDILNVLLQILEDGRLTDSQKRLVPFDNTIIIMTSNAAAEEIQEIISLERDSKKNGIEELKAEDIDTNETIEVNNSKYNVFQDDYAGPIKFLQSPIKENFLVDITEQLGVQFENSFRNLKDSDRLSKELEKANLSLVEND-----KMDSRILSKLKSAVLARLSTMFLPEFLNRLDDIIIFQPLKPEELRKICEIMIRDVSERIKTKKILLNVDEKVKMKLSREGYNPLYGARPLRRLITKYVEDLISENLLKDPILGQKIRTVRIQLTVDDQVI 1010          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A3G2QZG0_9STRA (Clp protease ATP binding subunit n=1 Tax=Synura uvella TaxID=52557 RepID=A0A3G2QZG0_9STRA)

HSP 1 Score: 629 bits (1621), Expect = 9.690e-207
Identity = 441/990 (44.55%), Postives = 568/990 (57.37%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYLLYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIE----------------NNALF*RALG*MGYMDMIFKIRCVVI*ENCEQFALRRVKIIFVRKISALKTLTAM-----KKVLKF*VN*KKTVSMYLKIFKKT*TFVTQRNY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRGRS*IYDEC*GSRTC*ART*DGRF*WA*N----VSLNEKFENCWPI---------------LRNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKLFILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIK-KRRNQRVAPA-ENCIIGGTENVSEQENVSNYN-----DEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHFVI*---RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC-----ISTFKTRR---VEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVTKKGRVIKIVLNEYNQVV 2911
            + EL ELMEILVRRQKNNPVLVG+AGVGKTAIVELFA+KIVNNLVPFILEGR+++SLDLARIVAG +      ++  +VLDEVL QP++IIFIDEIHNIGG GSAEGSLDAANILKPVLSRSGFQCIGATT KEYQ+IEKDPALNRRFQPI VKEP+ID+T+ ILYGLRPSLE+FHNV I P AL+LAA L++RYIYDRFLPDKAIDLVDRAAA+EVI++TNVTEGSVI+S+VN++L  +G LK+EAFRRGD+ +EYI QE+EN YR+FLL WIE+P ++ E   KK++  +       ++   L   E ++ F     R N +   K +   +  N+++   L  SI +     L+ YRI+LFLF    E                NN L    +      D I  IR     EN E F       + +    A+ T   +     KK+L +    K+ V     + KK    V Q      ++     +++   V    + +     GR  + D         AR   G F +         +N+   N   I               L  T +   + + +A      I  A  R+R G       N  I +            F+     G  K ++ KALAV MFG+E+DMIRFDMSEFMEKFT+SRLIGSP       +         +    +    +++KAHPD+LNVLLQILEDGRLTDSQKRLV F+NT++IMTSNAAAEEIQ II   + NQ  AP  E          S   N++ ++     D Y+G ++FL SPI        K NY L++R+   +      + S E  K  +               KK+ +  LK  V  R+S      +      I  F+  R   + K      + V++RV+ K+I L VDE VK KLTREGYNP+FGARPLRRLVTKY+EDLISE+LLK  + ++ R +KIVL   + VV
Sbjct:   54 DNELLELMEILVRRQKNNPVLVGDAGVGKTAIVELFASKIVNNLVPFILEGRSIVSLDLARIVAGSRYRGEFELRFQRVLDEVLSQPHIIIFIDEIHNIGGTGSAEGSLDAANILKPVLSRSGFQCIGATTVKEYQRIEKDPALNRRFQPIKVKEPSIDETIAILYGLRPSLESFHNVVILPGALQLAANLAARYIYDRFLPDKAIDLVDRAAAREVIRMTNVTEGSVIASIVNSALTGVGRLKLEAFRRGDVPSEYILQEIENSYRSFLLTWIEEPLNVPENSGKKIISPISQELFDTMRLSVLKRAEDLL-FSSSKPRFNTKLIYKTAELSVKKNQEIFYDLLYSIVNKINPHLSLYRISLFLFKEWTEAKEFNGFNEIMKEYYVNNML--TTVYDTYMYDYICNIR-EQRNENSENFLFSTTDFLEMDIEEAIVTEELLSESEEKKILVY----KEYVQELKPLLKKG---VVQSLAGSSQLTIPEQDLKNIYV---LLGYFSTEVGRDYLSDLNDPDLIRRARQL-GDFSFLKKRITQQEINDLLSNMTGIPIQSISTGESQKLLNLEATLHKRVIGQDEAI---SAIAKAIRRSRLGIQ---NPNRPIAS------------FLFCGPTGVGKTEVTKALAVCMFGAENDMIRFDMSEFMEKFTVSRLIGSPPGYVGYDEGGQLTDAVRRKAYSVVLFDEIEKAHPDILNVLLQILEDGRLTDSQKRLVPFDNTIIIMTSNAAAEEIQDIINVDQNNQETAPEIEXXXXXXXXXXSSVVNIAGFDYNLLEDSYAGVIKFLQSPI--------KENYLLDIRDQVSVEFEDSFRASKENEKISKXXXXXXXXXXXXXXXKKKILSTLKAAVLDRLSTLFLPEFLNRLDDIIIFQPLRQDELRKICEIMIREVSERVKPKKIILYVDEKVKMKLTREGYNPLFGARPLRRLVTKYIEDLISENLLKYPINQESRTVKIVLTVDDTVV 1002          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A3G2QYA0_9STRA (Clp protease ATP binding subunit n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A3G2QYA0_9STRA)

HSP 1 Score: 605 bits (1559), Expect = 4.670e-197
Identity = 423/1006 (42.05%), Postives = 576/1006 (57.26%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYLLYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIENNALF*--RALG*MGYMDMI------FKIRCVVI*ENCEQ------FALRRVKIIFVRKISALKTLTAMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQRNY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRGRS*IYDEC*GSRTC*ART*D-GRF*WA*NVSLNEKFENCW------PI-------------LRNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKLFILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQII-------------------KKRRNQRVA-----PAENCIIGGTENVSEQENVSNYN--DEYSGPLEFLGSPINDNF*PIFKHN----YNLNLRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC-----ISTFKTRRVE---KNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVTK--KGRVIKIVLNEYNQVV 2911
            EKEL E+MEILVRRQKNNPVLVG+AGVGKTAI+ELFA +IVNNLVPFILEGR+++SLDLARIVAG +      ++  +VLDEV++QP++I+FIDEIHN+GG GSAEGSLDAANILKPVLSRSGFQCIGATT KEYQ+IEKDPALNRRFQPI VKEP+I +T+NIL+GLR S E+FHNV I P AL+LAA L++RYIYDRFLPDKAID+VDRAAAKEVI +T+V EGSVI+S+VN+SL  +G LK+EAFRRGDIA E+I QE+EN YRNFLL W+E+P  I E  EK +L  +       ++   L   + ++ F     R  ++   + +   +  N  +  ++  SI +  K  L+ YRI LFLF    +    +   + +G   Y  M+      F ++  +I    EQ      F       + + + S L T   + ++       ++   +  K + +  T V ++   +  I   +  +    + N+ +    F       Y           R    G F +       E+  N        PI             L NT +   + + +A      I  A  R+R G       N  I +            F+     G  K ++ KALAVSMFG+ESDMIRFDMSEFMEKFT+SRLIGSP       +         +    +    +++KAHPD+LN+LLQILEDGRLTDSQKRLV F+NTV+IMTSNAAAEEIQ+II                   + ++ +++      PA+N     +   +E E ++ YN  D Y+G L+FL SPIN+NF           ++ + ++     + +   EK ++Q   +     T   K+ +K S   LK  V  R+       +      I  FK  R++   K      + V  RV+ K+++L VDE +K KLT+EGYNP+FGARPLRRLVTKY+EDL+SE+LL + +    K R ++I+L   N+VV
Sbjct:   48 EKELLEMMEILVRRQKNNPVLVGDAGVGKTAIIELFATRIVNNLVPFILEGRSIVSLDLARIVAGSRYRGEFELRFQRVLDEVMDQPHIIVFIDEIHNLGGTGSAEGSLDAANILKPVLSRSGFQCIGATTLKEYQRIEKDPALNRRFQPIKVKEPSIPETINILFGLRTSFESFHNVVILPGALQLAANLAARYIYDRFLPDKAIDVVDRAAAKEVIAMTSVGEGSVIASIVNSSLTNVGRLKVEAFRRGDIAAEFILQEIENAYRNFLLTWLEEPLMISEELEKTILSPIGQELFDTMRLSVLTRVDELL-FSSSKPRLRKKVVYRKTNLSVKKNYDISSEIMESIINRKKPKLSAYRIALFLFREWSDLKGAYASTKKIG-RWYRKMMLIPFLKFGMKSHIIKRRLEQLPKLRSFLTGSYDFLDIDRESELITEELLSEI-------EEKRILIFKEYVQELTPVLKQGIVQSLIDSSHIYLSETDLKNIYVLLGYFSTEYGKDYLSNLNDPNLIKRARQLGDFSFLKKRITQEEISNLLSNMTGIPIQTLSAGESEKLLNLENTLHKRVIGQDEAI---IAIAKAIRRSRLGIQ---NPNRPIAS------------FLFCGPTGVGKTEVTKALAVSMFGAESDMIRFDMSEFMEKFTVSRLIGSPPGYVGYDEGGQLTDAVRRKAYSVVLFDEIEKAHPDILNILLQILEDGRLTDSQKRLVPFDNTVIIMTSNAAAEEIQEIINAENEAKKETGSEWEEEQKETKKEEKIGFIKKLPAKNTEKNKSNKNNEPE-ITYYNVADSYAGALKFLNSPINENFLRDVHGEIVGEFSFSFKDIAAQEKQRLELEKQEKQELIRKLEEQTFNEKK-EKNSAGTLKNAVMERLGTLFLPEFLNRLDDIIIFKPLRIDELRKICDIMIREVNQRVKTKKVDLIVDEKIKMKLTKEGYNPLFGARPLRRLVTKYIEDLVSENLLIDPMPSDVKMRTLRILLTLDNKVV 1024          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A3G2QZW1_9STRA (Clp protease ATP binding subunit n=1 Tax=Neotessella volvocina TaxID=2419522 RepID=A0A3G2QZW1_9STRA)

HSP 1 Score: 576 bits (1485), Expect = 3.600e-185
Identity = 413/1001 (41.26%), Postives = 557/1001 (55.64%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYLLYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIENNALF*-RALG*MGYM----------------------DMIFK-IRCVVI*ENCE-QFALRRVKIIFVRKISALKTLTAMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQRNY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRGRS*IYDEC*GSRTC*ART*DGRF*WA*NVSLNEKFENCWPILRNTFNPFQ----VWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKL--FILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRR-------NQRVAPAENCIIGGTEN-----------------VSEQENVSNYNDEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHF-VI*RIQ*S*EKLKRQRW----GKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC-----ISTFKTRRVE---KNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLL--KNSVTKKGRVIKIVLNEYNQV 2908
            EKEL ELMEILVRRQKNNPVLVG+AGVGKTAIVELFA++IV NLVPFILEGRTLISLDLARIVAG +      ++  +VLDEVLEQP++IIFIDEIHN+GG GSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQ+IEKDPALNRRFQPI VKEP+ D+TV+IL+GLRPS E+FHNVEI   ALR A +LS RYI +RFLPDKAIDL+DRAAA+EVI LT+V+EGS +S++ NA LNK+G+LK EAFRRGDIATE++FQE+EN YRNFL  W+E P +I E  +   +L  +    +      L      + F  +  R   +++     F  +  E L   ++N ++ G        R ++  F   I    +F  + L  + Y+                      D +F  I      EN E ++++     I   K   L  L +++  +      K+ V     +F+K    V    Y    +KF    +   I     + +     G++ +++     R   A+   G F          +  N    +  T  P Q    +   K     K +               K+   I+      +  N  +  F      G  K ++ KALAVSMF SE+DMIRFDMSEFMEKF +SRLIGSP                 K    +    +++KAHPDVLN+LLQILEDGRLTDSQKRLV F+NT++IMTSNAAAEEIQQI+K+ R       N++   +E  II   +                   ++Q  V    DEY G + F    +  NF      N    L N F V+  +    ++L++++     GK+     +  K  ++ +++ LK  V  R+S      +      I  F+  R E   K       ++  RV+ + + LQVD++V+  LT+EGYNP FGARPLRRL+TK +ED +SE+LL   + + K+ ++I+I ++  +QV
Sbjct:   35 EKELFELMEILVRRQKNNPVLVGDAGVGKTAIVELFASRIVENLVPFILEGRTLISLDLARIVAGSRYRGEFELRFQRVLDEVLEQPHIIIFIDEIHNLGGTGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQRIEKDPALNRRFQPIKVKEPSFDETVDILFGLRPSFESFHNVEISAGALRTAVDLSIRYINERFLPDKAIDLIDRAAAREVILLTSVSEGSALSALTNAGLNKIGALKAEAFRRGDIATEFVFQEIENSYRNFLFSWLESPLTIPEKADG--ILSPIGDGLFTTMRDSLLARVDELLFSSKNPRFITKQSQLTKNFSSTLCEDLYDYMRNELEYGRCAPFTISRASILTFGEWIFATTIFHPQDLESLIYLEENIENLLYELYIPEYFALSTYDKLFPTISLDTEMENLENEYSINYDIEIIQEKFEVLNELESIRIDIF-----KEYVESLQPLFRKG--LVESLQY-SSDLKFTEEEL---ITIYTLLGFYSTMTGKNFLFETESAERIKIAKKL-GDFSGLKKCIRELEVSNLLASI--TGIPIQKVTSIESTKLLNLEKTLHERVIGQEEAISAIAKA---IRRSRLGMRNPNRPIASFFFCGPTGVGKTEVTKALAVSMFNSEADMIRFDMSEFMEKFAVSRLIGSPPGYVGYDDGGQLTDSVRKKPYSVVLFDEIEKAHPDVLNILLQILEDGRLTDSQKRLVPFDNTIIIMTSNAAAEEIQQILKEDREKSSTSTNEKNGISETKIIPDKKTGLSFPSIVPQNRTLTMLSNQQLEVETILDEYVGSMSFFSRKVEQNFEKDL--NIERELENSFKVLDNVDFYQKELEKEKTNEESGKFVEKLRKDEKEKEQLNIK-LKNAVVERLSTMFLPEFLNRLDDIIVFQPLRPEELRKICDLMINTIVKRVEERDVILQVDDSVREFLTKEGYNPAFGARPLRRLITKTIEDRVSENLLVTTDEIIKEKQIIRITIDNKDQV 1013          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A3G2QZ07_9STRA (Clp protease ATP binding subunit n=1 Tax=Synura sphagnicola TaxID=52556 RepID=A0A3G2QZ07_9STRA)

HSP 1 Score: 575 bits (1482), Expect = 5.950e-185
Identity = 417/1035 (40.29%), Postives = 566/1035 (54.69%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYLLYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIEN--NALF*RALG*MGYMDMI------FKIRCVVI*ENCEQFALRRVKIIFVRKISALKTLT----AMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQ----RNY*KFKIKF*NSNVRC*I-----------VHNLCIAWLLFYRGRS*IYDEC*GSRTC*ART*DGRF*WA*NVSLNEKFENC-----------WPILRNTFNPFQVWK---------------HKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKL--FILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLM-KLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQII-----------------KKRRNQRVAPAENCII------------GGTENVSEQENVSNY----------NDEYSGPLEFLGSPINDNF*PIFKHNYNLN---LRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYC--------ISTFKTRRVEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVTKKGRVIKIVLNEYN 2902
            E EL ELMEILVRRQKNNPVLVG+AGVGKTAI+ELFA KIV NLVPF+LEGR+++SLDLARIVAG +      ++  +V+DEV+E+P++IIFIDEIHNI G GSAEGS+DAANILKPVLSRSGFQCIGATT  EYQ+IEKDPALNRRFQPI VKEP+I DT++ILYGLRPSLE+FHNV I P A+ LAA L+ RYIYDRFLPDKAIDL+DRAAAKEVI++T+VT+GSVI S  NASL  +G LK+EAFRRGDI  EYI QE+EN YRNF+L W+E+P SI +     ++  +       ++   L   + ++   F       +K         S N+++  ++   + +G++  ++ YRI+L LF+  IE   NA+           D++       K+    + +   ++ ++    +   ++   K LT    A +  L+     +++    L I         Q    ++   FKI       +  I           +    I  L    G   + ++            DG        S  E  E+            +  L+ T N  QV                  ++    K  +    R  G           I+      +  N  +  F+     G  K ++ KALAVSMFGSE DMIR DMSEFMEKFT+SRLIGSP       +E   LT   + ++    L  +++KAHPD+LN+LLQILEDGRLTDSQKRLV F+NTV+IMTSNAAAEEIQ II                 +K+ N   A  ++  +             GT ++ + +N+              D+YSG +EFL S +N+NF    K N+N N       F   ++  + EK + ++  +Y +      K  K++ +  LK  V  ++       +             K   + K      K V DRV+ K++ L VD+ VK KLTR+GYNP  GARPLRRL+TKYVEDLISE+LL+  + KK R+I+I+L+  N
Sbjct:   48 EAELLELMEILVRRQKNNPVLVGDAGVGKTAIIELFATKIVKNLVPFVLEGRSIVSLDLARIVAGSRYRGEFELRFQRVIDEVMEEPHIIIFIDEIHNITGTGSAEGSIDAANILKPVLSRSGFQCIGATTNNEYQRIEKDPALNRRFQPIQVKEPSIADTISILYGLRPSLESFHNVVILPGAIHLAATLADRYIYDRFLPDKAIDLIDRAAAKEVIRMTSVTQGSVIQSFANASLIAVGRLKLEAFRRGDIIAEYILQEIENSYRNFILTWLEEPLSIPDTPPGLVVSPVSLKIFNRMRNSVLKRVDELL---FASSNNRYKKVVTRPLLSSSKNKEILQEITAGLDNGSETPVSLYRISLILFTFWIEREENAIDYENESSNKEYDIVPTIKDNKKVTIQTLSKILLKYLVKTFGYLNHIQLQKAKNLTFYNLAHEDFLETDFEIQESQQNSLPILPLKDEVEEQEGSEQDLSDFKILSEKEEKKLFIYKEYIDGLEPLIRKSLIQSLQASGGIPFVKEDLENLYALFGFL-DGEE----GKSYLEDLEDPDLLKRARELGDFTSLKTTINQIQVNNLLSSMTGIPIQSISADESEKLLKIESVLHQRVIGQEEAITAIAKAIRRSRLGIQNPNRPIASFLFCGPTGVGKTEVTKALAVSMFGSEQDMIRLDMSEFMEKFTVSRLIGSPPGYIGY-EEGGQLTDAVRRKVYSVVLFDEIEKAHPDILNILLQILEDGRLTDSQKRLVPFDNTVIIMTSNAAAEEIQDIINNTKAQTDIEIEESENNEKKENLLTAEEKSSPVLNSKNNEFLNNFFGTSDLIDTKNIEELFTETLPFKTLEDKYSGSIEFLLSGVNENFFLDLKDNFNDNPAFASRDFE--KLSAAEEKTRVEKEIEYEK------KDEKQKVIDRLKSAVSEKLGSIFLPEFLNRLDDIIIFQPLKLEELRKICDIMVKQVRDRVKSKKVNLLVDDKVKLKLTRDGYNPALGARPLRRLITKYVEDLISENLLRYPLNKKSRIIEIILDVDN 1065          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A7S6T9W0_9STRA (Clp protease ATP binding subunit n=1 Tax=Poteriospumella lacustris TaxID=1117027 RepID=A0A7S6T9W0_9STRA)

HSP 1 Score: 557 bits (1435), Expect = 2.880e-178
Identity = 384/945 (40.63%), Postives = 529/945 (55.98%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSIEEVEEKKMLLYL---LYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLFLFSCLIENNALF*RALG*MGYMDMIFK------IRCVVI*ENCEQFALRRVKIIFVRKISALKTLTAMKKVLKF*VN*KKTVSMYLKIFKKT*TFVTQRNY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRG-RS*IYDEC*GSRTC*ART*DGRF*WA*NVSLNEKFENCWPIL-------------RNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKLFILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRRNQRVAPAENCIIGGTENVSEQENVSNYNDEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRA-LKYNVFTRIS*PSG*HYC-----ISTFKT---RRVEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNS 2854
            E EL E+MEILVRRQKNNPVL+GEAGVGKTAI+ELFA K+VNN VPF+LEGR+++S+DLARI+AG +      +++ KVLDE+++ P++I+FIDEIH + GAG+AEGSLDAANILKP LSRSGFQCIGATT KEYQKIEKDPALNRRFQPI VKEP+I+DT+NILYGLRPS+EAFHNV   P  LRLAAELSSRYIYDRFLPDKAIDLVDR AAKEV+K T +   ++ISS+V+ +L  LG LK E +RRGD+A+ YIFQE+E  YR FLL W+E P ++ E E K     L   LY K  +   K +  +E +        R   ++  KN     + N    + +  + K  AK    T + +L+  S  +  N L   +     +  +I K       +  +I +    F L   +     K   LK L +  +  +      KT   +L+  K     + ++   +   K  N  +      N+      F +  ++ +  +   + T  +   +G      +    E   +    L             +   N  +    +       ++      R         N  I +            F+     G  K ++ KALAVS+FGSESDMIRFDMSEFMEKFT+SRLIGSP       +         +    +    +++KAHP++LN+LLQILEDGRLTD+QKRL+ FENTV+IMTSNA A EIQ ++K   N+  +     II   E  ++  N S + D Y+G LEF  SPI        + NY  +L+N      ++ S   LK  +  +   +     K++   +  + LK  V  R+S      +      I  FK    + +        + +  R++ KQ++L+V+ENVK+KL+ + YNP+FGARPLRR++TK+VEDL+SE LLKNS
Sbjct:  201 EDELAEMMEILVRRQKNNPVLIGEAGVGKTAIIELFATKLVNNSVPFVLEGRSIVSIDLARIIAGSRYRGEFELRLQKVLDEIIQHPHMIMFIDEIHTLSGAGAAEGSLDAANILKPALSRSGFQCIGATTIKEYQKIEKDPALNRRFQPIKVKEPSIEDTLNILYGLRPSMEAFHNVSFLPGTLRLAAELSSRYIYDRFLPDKAIDLVDRVAAKEVLKSTTIKSQTIISSIVDGALLNLGKLKNECYRRGDLASLYIFQEVEFAYRRFLLEWVESPLALPENEAKDNFTPLAEDLYKKIRLSILKHV--DELLFASPVSKQRIEVKEKEKNLSPKANKNIFSSVLIALATKKFAKTL--TLKKSLYRISLYLLENYLSYTSDAIAPFTKIISKEFKHLEFQSYLISKPSSDFLLEDRE-----KYEELKVLPSEVEETRL-----KTYFNFLEDLKP----LVRQGLIESLTKSGNFKLSEKEAQNIYSLLGFFSQDIKNNLLAQLEQNATFKSARQEGNITSLKHEISAEDIRDLVSSLTGIPLKSISNDESKRLLNLEEELHKRVIGQEAAVSAIAKAVRRSRLGIQNPNRPIAS------------FMFCGPTGVGKTEVTKALAVSLFGSESDMIRFDMSEFMEKFTVSRLIGSPPGYVGYEEGGQLTDGVRRKPYSVVLFDEVEKAHPEILNILLQILEDGRLTDTQKRLIPFENTVIIMTSNAGASEIQNLLKDELNKEKSD----II---EAEAKNRNSSVFLDPYAGSLEFFESPI--------QLNYIEDLQNRLSN-ELKDSYRGLKSSQLLEKGNDKKSLDKKSTSSNENSSLKEAVLNRLSTIFLPEFLNRLDDIVIFKPLSQKEIRLICNIMIQQLVKRLETKQVKLKVEENVKTKLSFDAYNPVFGARPLRRMITKFVEDLVSEFLLKNS 1099          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A520D0X8_9SPHI (AAA family ATPase n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A520D0X8_9SPHI)

HSP 1 Score: 527 bits (1358), Expect = 9.600e-166
Identity = 390/1025 (38.05%), Postives = 536/1025 (52.29%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSI-EEVEEKKMLLYLLYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVALNTYRITLF-LFSCLIEN--NALF*RALG*-MGYMDMIFKIRCVVI*ENCEQFALRRVKIIFVRKISALKTLTAMKKV--LKF*VN*KKTVSMYLKIFKKT*TFV---TQRNY*KFKIKF*NSNVRC*IVHNLCI------------------AWLLFYRGRS*IYDEC*GSRTC*ART*DGRF*WA*NVSLNE-----KFENCWPILRNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKS--N*KIKTWHSKSK*TNSKL----------------FILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRRNQRVAP------------------AENCIIGGTENVSEQENVSNYNDEYSGPLEFLGSPINDNF*PIFKHNYNLNLRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYN----------------VFTRIS*PSG*HYC-----ISTFK--TRRVEKNM*HHG-KSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKNSVTKKGRVIKIVLNEYNQVV 2911
            E EL E+MEILVRRQKNNPVLVG+AGVGKTAI+ELFAN++V NLVPF+L+GR+++S+DLARIVAG +       +  +V+DE LEQP++I+FIDEIH + GAGSAEGSLDAANILKP LSRSGFQC+GATT KEYQ IEKD ALNRRFQPI VKEP+I DTV+ILYG+RPSLEAFHN+EI P AL  AAELS+RYI DR LPDKAIDLVDRAAAK+VI+LT VT GSVISS+ ++++  +G L++EAFRRGDIA+E++FQE+E  YR+F+L W+E P  I +  E  K +   +    +      +      + F     R   +K  +      S N K+     N I S    A     ++L+ L +CL ++  +A F    G  +  ++   K +  V           +  + FV + +  K L  + K     +    ++ V   +  + K   F+    ++   K+K+       R  IV +                      + L  + R  IY       T      D    +  N+   E     ++   + +L+       + K  A       T +  R       N ++  + ++   H      +  +                F      G  K ++ KALA +MFGSE+DMIR DMSEFMEKFT+SRL+GSP                 +    +    +++KAHPDVLN+LLQILEDGRLTDS KRL+ FENTV+IMTSNA A+ IQ ++K R   ++                    A   +        E E  S   DEYSGP+ FL SPI               + NHF     Q        + + K++       K+   +S+ +LK+                 V  R+S      +      I  F+  TR   K +      +VADR+  K+I L +   +K+KL +EGYNP FGARPLRRLVTKY+ED IS+ +L N   K    + I L++ N++V
Sbjct:  179 EAELYEMMEILVRRQKNNPVLVGDAGVGKTAIIELFANRLVTNLVPFVLQGRSIVSIDLARIVAGSRYRGEFEARFQRVIDEALEQPHIILFIDEIHTLVGAGSAEGSLDAANILKPALSRSGFQCVGATTGKEYQAIEKDEALNRRFQPIKVKEPSIQDTVSILYGIRPSLEAFHNLEILPIALHSAAELSARYIQDRHLPDKAIDLVDRAAAKKVIQLTRVTSGSVISSLASSAIQNMGRLRLEAFRRGDIASEFVFQEIETAYRSFILTWVEQPLQIPDSTEVPKDIQTPIADSLFRFMRNSMLPKVDELLFSSPTPRKMHRKFKRFKNISASRNLKI---YHNFIPSSFTAASKPKNLSLYRLATCLFQSRGDAAFQTFRGSFVKRIEKTQKRKIFVSPYLTANSTFLQPDLRFVTQTNWYKILKELNKYPWFSYLSFIREKVESKISWYSKYKDFIPKDAEKFEKKYKLLSQLEKNRTLIVRDFLYYLRPLLRKGLVESFTKNTEFALSKKERKIIYILLGYLST------DLGHDFLLNLESPELVRRARYFGNFNLLKERLTDDDIQKLLAH-ITGIPTQSISRGEAEKLKNLEAILHQRVIGQHEAVTAISKAIRRSRVGIQNPSRPIASFFFCGPTGVGKTEVTKALAATMFGSENDMIRLDMSEFMEKFTVSRLVGSPPGYVGYEDGGQLTDAVRRKPYSVVLFDEIEKAHPDVLNLLLQILEDGRLTDSHKRLIPFENTVIIMTSNAGADSIQAMMKDRNENKIEEEKEETEEKTNASNSLKLNASKLLAFYPSKKPENETFSYMEDEYSGPIRFLKSPI---------------VENHFADVSSQ-------LEGYIKFSLRKVENKKKLSAKSISSLKFATTIADREEFLGNLKNVVLERLSKLFLPEFLNRLDDIIIFQPLTREDLKEICDIMINNVADRIIKKEIRLFISTALKNKLLQEGYNPAFGARPLRRLVTKYIEDKISDFVLNNPDIKPV-ALTIDLDQKNEIV 1170          
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Match: A0A7S6TCV5_9STRA (Clp protease ATP binding subunit n=1 Tax=Spumella sp. Baekdong012001B8 TaxID=2782410 RepID=A0A7S6TCV5_9STRA)

HSP 1 Score: 518 bits (1334), Expect = 1.500e-165
Identity = 364/957 (38.04%), Postives = 508/957 (53.08%), Query Frame = 2
Query:  116 EKELCELMEILVRRQKNNPVLVGEAGVGKTAIVELFANKIVNNLVPFILEGRTLISLDLARIVAGVKISW*V*IKISKVLDEVLEQPNVIIFIDEIHNIGGAGSAEGSLDAANILKPVLSRSGFQCIGATTTKEYQKIEKDPALNRRFQPISVKEPTIDDTVNILYGLRPSLEAFHNVEIQPSALRLAAELSSRYIYDRFLPDKAIDLVDRAAAKEVIKLTNVTEGSVISSVVNASLNKLGSLKIEAFRRGDIATEYIFQELENGYRNFLLRWIEDPRSI-EEVEEKKMLLYLLYHKAYMIK*KFLY*NE*MICFFFQILRANEQKNSKNSGFYLSANEKLGIKLKNSIKSGAKVA-LNTYRITLFLFS--CLIENNALF*RALG*MGYMDMIFKIRCVVI*ENCEQFALRRVKIIFVRKISALKTLTAMKKV-----LKF*VN*KKTV------------SMYLKIFKKT*TFVTQRNY*KFKIKF*NSNVRC*IVHNLCIAWLLFYRGRS*IYDEC*GSRTC*ART*DGRF*WA*NVSLNEKFENCWPILRNTFNPFQVWKHKAF*FRKYIT*ACYRTRGGYFCNCKSN*KIKTWHSKSK*TNSKLFILWANRG*EKRKLQKALAVSMFGSESDMIRFDMSEFMEKFTISRLIGSPQVI*DMTKEAN*LTLFEKNRIQLFYLMKLKKAHPDVLNVLLQILEDGRLTDSQKRLVSFENTVLIMTSNAAAEEIQQIIKKRRNQRVAPAENCIIGGTENVSEQENVSNYNDEYSGPLEFLGSPINDNF*PIF--KHNYNLNLRNHFVI*RIQ*S*EKLKRQRWGKYARNGTRCFKRAKKRSVRALKYNVFTRIS*PSG*HYCISTFKTRRVEKNM*HHGKSVADRVQLKQIELQVDENVKSKLTREGYNPMFGARPLRRLVTKYVEDLISESLLKN--SVTKKGRVIKIVLNEYNQVV 2911
            E EL E+MEILVRRQKNNPVL+GEAGVGKTA++ELFA K+V NLVPF+L+GR+++SLDLA IVAG K       +   +L E L +PN+I+FIDEIHN+ G GSAEG++DAAN+LKP+LSRSGFQCIGATT KEYQ+IEKDPALNRRFQP+ + EPT+ D + I+YGLR  LE +HNV I P+A+R A EL+SRY+++RFLPDKAIDL+DRAAA+EVI+ TNV +GS++++ VNA L  +  LKI A RRGDIA E++ QE+EN YR FLL W++ P  + EE+     +                             L+A +QK         SA   L   L + + +  ++A L      LF  S   L  + A   ++L    Y+++   +       N +  A  ++ I F +K+  L +   ++ +     +KF      T+              +L    ++      + +  +K     +++R  + H + I      +  S                              +K  N    L +  +   + + +A    K I  A  R+R G       N  I +            F+     G  K +L KALA S+FG+ESDMIRFDMSEFMEKF +SRLIGSP       +     +   K    +  L +++KAHPDVLN+LLQILEDGRLTDSQ+RLV F+NTV+I+TSN AA EI + I        +   N  +       +Q     + +E SG   FL +PI + F      K     N   H+   R     +K +     + A   TR  K      +  +    F            +   + R++ + M     +VA   Q   IEL VD  VK KLTR+ YNP+FGARPLRRLVTK +EDL+++SLL N  + + K   + I LNE++Q++
Sbjct:   78 ESELAEMMEILVRRQKNNPVLLGEAGVGKTAVIELFAKKMVGNLVPFVLQGRSIVSLDLAAIVAGAKFRGEFEQRFQGILLEALRRPNLILFIDEIHNLVGTGSAEGTMDAANLLKPILSRSGFQCIGATTPKEYQRIEKDPALNRRFQPVKINEPTVSDAIEIIYGLRAGLEGYHNVIILPTAIRTAVELTSRYVHERFLPDKAIDLIDRAAAREVIRSTNVAQGSILTNYVNAGLINVSKLKIAASRRGDIAAEFVLQEVENAYRKFLLMWVDKPLGMSEEISLNSGIS----------------------------LKAGQQKKK-------SAPSPLASPLLSRLVNDMRIAFLKNAHSLLFAQSKPALALSQAHVNKSLPLESYVEVCEGL-------NKKDQAQAQILISFFQKLEPLLSKQVIESLCTSSDMKFTNKELATIYSLLGHFSAYSGKAFLSCLAESKESQDLQIFENYKEHITENHIRALLAHIIGIPLQTLTKDES------------------------------QKLLN----LESALHQRVIGQDEAV---KAIAKAIKRSRLGLQ---NPNRPIAS------------FLFCGPTGVGKTELTKALAFSLFGAESDMIRFDMSEFMEKFAVSRLIGSPPGYVGYDEGGQLTSAVRKKPYAVLLLDEVEKAHPDVLNILLQILEDGRLTDSQQRLVLFDNTVIILTSNVAAHEIHEAIN-------SATANISLDRANTPGKQMEEFIFTEECSGIASFLDAPIKEEFFADLSKKSQKEFNRSLHYTTSRKSTVEQKPRTSLVDEEAL--TRNLKEIALAELSKMFLPEFLNRLDDIIVFQPLKREELRKICEIMCQQ--TVARLAQNNNIELIVDNQVKMKLTRDAYNPLFGARPLRRLVTKNIEDLVADSLLVNFEAFSAKSLKLHIKLNEFDQII 929          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1346.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6PV13_9STRA9.570e-27954.81Clp protease ATP binding subunit n=1 Tax=Pedospume... [more]
A0A0D3MKN6_9STRA6.380e-22545.93ATP-dependent Clp protease ATP-binding subunit Clp... [more]
A0A3G2QZK9_9STRA1.690e-21144.55Clp protease ATP binding subunit n=1 Tax=Mallomona... [more]
A0A3G2QZG0_9STRA9.690e-20744.55Clp protease ATP binding subunit n=1 Tax=Synura uv... [more]
A0A3G2QYA0_9STRA4.670e-19742.05Clp protease ATP binding subunit n=1 Tax=Synura pe... [more]
A0A3G2QZW1_9STRA3.600e-18541.26Clp protease ATP binding subunit n=1 Tax=Neotessel... [more]
A0A3G2QZ07_9STRA5.950e-18540.29Clp protease ATP binding subunit n=1 Tax=Synura sp... [more]
A0A7S6T9W0_9STRA2.880e-17840.63Clp protease ATP binding subunit n=1 Tax=Poteriosp... [more]
A0A520D0X8_9SPHI9.600e-16638.05AAA family ATPase n=1 Tax=Pedobacter sp. TaxID=141... [more]
A0A7S6TCV5_9STRA1.500e-16538.04Clp protease ATP binding subunit n=1 Tax=Spumella ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1346contigP-littoralis_Contig1346:25787..28697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog575605.ACQN01000026_gene834
Preferred nameclpC
PFAMsAAA,AAA_2,ClpB_D2-small,Clp_N,UVR
Model size2911
Max annot lvl91061|Bacilli
KEGG koko:K03696
KEGG Pathwayko01100,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170
Exons1
Evalue3.95e-19
EggNOG OGsCOG0542@1|root,COG0542@2|Bacteria,1TPMU@1239|Firmicutes,4HACY@91061|Bacilli,3F3RV@33958|Lactobacillaceae
DescriptionPart of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
Cds size408
COG categoryO
BRITEko00000,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789619.6129513-UTR-P-littoralis_Contig1346:25786..273091680789619.6129513-UTR-P-littoralis_Contig1346:25786..27309Pylaiella littoralis U1_48UTRP-littoralis_Contig1346 25787..27309 +
1680789619.6354423-UTR-P-littoralis_Contig1346:27717..286971680789619.6354423-UTR-P-littoralis_Contig1346:27717..28697Pylaiella littoralis U1_48UTRP-littoralis_Contig1346 27718..28697 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789619.622995-CDS-P-littoralis_Contig1346:27309..277171680789619.622995-CDS-P-littoralis_Contig1346:27309..27717Pylaiella littoralis U1_48CDSP-littoralis_Contig1346 27310..27717 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1346.5.1prot_P-littoralis_Contig1346.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1346 27310..27717 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1346.5.1

>prot_P-littoralis_Contig1346.5.1 ID=prot_P-littoralis_Contig1346.5.1|Name=mRNA_P-littoralis_Contig1346.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=136bp
MSDAELSTIYALLGYYSTEAGREFMTNVEDPELVKRARKTGDFSGLKTYH
STRNSRIVGRYYGIPSIHFKFGNTKLSNLESTLHKRVIGQEEAISAIAKA
IKRSRLGIQNPNRPIASFLFCGPTGGRKNGSYKKR*
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mRNA from alignment at P-littoralis_Contig1346:25787..28697+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1346.5.1 ID=mRNA_P-littoralis_Contig1346.5.1|Name=mRNA_P-littoralis_Contig1346.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2911bp|location=Sequence derived from alignment at P-littoralis_Contig1346:25787..28697+ (Pylaiella littoralis U1_48)
GATAATTTCGACTTAGAAGACGAAGATGAGGAAGAAAAAGGTCCTGCCCT TGAAATTTATGGTACAGATTTAACTTCTCTTGCTCGACAAGGGCAATTAG ATGAATGCTTTGGCCGAGAAAGAGCTTTGTGAGTTAATGGAAATTTTAGT TAGGCGGCAAAAAAATAATCCAGTACTTGTTGGGGAGGCTGGTGTAGGAA AAACTGCAATCGTAGAACTTTTTGCAAATAAAATCGTAAATAATTTAGTT CCTTTTATTTTAGAAGGTCGTACTCTTATTAGTTTAGATTTAGCGCGAAT TGTTGCAGGGGTCAAGATATCGTGGTGAGTTTGAATTAAGATTTCAAAAG TTTTAGATGAAGTTTTAGAACAACCAAATGTAATAATATTTATAGATGAG ATTCATAATATTGGCGGTGCTGGTTCTGCTGAAGGTTCTCTCGATGCTGC AAATATATTAAAGCCCGTCTTATCACGAAGTGGGTTTCAGTGTATTGGGG CAACTACAACAAAAGAATACCAAAAAATTGAAAAAGATCCGGCATTAAAC CGTAGATTTCAGCCAATTAGTGTGAAAGAACCAACAATTGATGATACGGT AAATATATTATATGGGCTACGCCCAAGCCTTGAAGCTTTTCACAACGTTG AAATTCAACCTAGTGCATTAAGATTGGCAGCAGAACTATCATCACGATAT ATTTATGATAGATTTCTTCCTGATAAGGCCATTGACTTGGTTGATCGAGC TGCAGCTAAGGAAGTAATTAAGTTAACCAATGTTACAGAGGGATCTGTAA TATCGTCCGTAGTTAATGCCAGTTTGAATAAATTAGGTTCTTTAAAAATC GAGGCCTTTCGACGAGGTGATATAGCAACGGAATATATCTTTCAAGAGCT TGAAAATGGGTATAGAAACTTTTTACTTCGCTGGATAGAAGACCCAAGGT CGATTGAGGAAGTAGAAGAGAAAAAAATGTTGCTTTATCTCCTATATCAT AAAGCTTATATGATAAAATGAAAATTTCTGTATTAAAACGAGTAGATGAT TTGCTTTTTTTTTCAAATATTGCGCGCAAACGAACAAAAAAATTCAAAGA ATTCAGGATTTTACCTCAGCGCAAATGAGAAATTAGGCATAAAATTGAAA AATAGTATTAAATCAGGAGCAAAAGTAGCATTAAACACCTACAGAATAAC ATTATTTTTATTTAGCTGTTTAATTGAAAATAATGCTCTTTTTTAGCGAG CTCTGGGTTAAATGGGATATATGGATATGATCTTCAAGATCAGATGTGTA GTCATTTAAGAAAACTGCGAACAATTTGCATTACGAAGGGTAAAAATTAT TTTCGTGAGGAAGATTTCTGCTCTGAAGACATTGACAGCTATGAAGAAAG TTTTGAAGTTTTAAGTGAACTAGAAGAAAACCGTATCGATGTATTTAAAG ATTTTTAAAAAAACTTAAACCTTTGTTACGCAAAGGAATTATTGAAAGTT TAAAATCAAGTTCTGAAATTCAAATGTCAGATGCTGAATTGTCCACAATT TATGCATTGCTTGGTTATTATTCTACAGAGGCAGGTCGTGAATTTATGAC GAATGTTGAGGATCCAGAACTTGTTAAGCGCGCACGTAAGACGGGCGATT TTAGTGGGCTTAAAACGTATCACTCAACGAGAAATTCGAGAATTGTTGGC CGATATTACGGAATACCTTCAATCCATTTCAAGTTTGGAAACACAAAGCT TTCTAATTTAGAAAGTACATTACATAAGCGTGTTATAGGACAAGAGGAGG CTATTTCTGCAATTGCAAAAGCAATTAAAAGATCAAGACTTGGCATTCAA AATCCAAATAGACCAATAGCAAGCTTTTTATTTTGTGGGCCAACAGGGGG TAGGAAAAACGGAAGTTACAAAAAGCGTTAGCGGTAAGTATGTTTGGTTC TGAAAGTGATATGATTCGCTTTGACATGTCAGAATTTATGGAAAAGTTTA CTATATCTCGGCTAATTGGATCTCCCCAGGTTATATAGGATATGACGAAG GAGGCCAATTAACTGACTCTGTTCGAAAAAAACCGTATTCAGTTGTTTTA TTTGATGAAGTTGAAAAAAGCGCATCCGGATGTTTTAAACGTCCTATTGC AAATTTTAGAAGACGGTCGATTAACAGATAGTCAAAAACGGTTGGTATCT TTTGAAAATACTGTACTTATTATGACTTCGAACGCGGCAGCAGAAGAAAT ACAGCAAATAATTAAAAAGAGACGAAACCAACGAGTAGCTCCAGCCGAAA ATTGTATTATTGGTGGAACTGAAAATGTGTCTGAACAAGAAAATGTATCT AATTATAATGATGAGTACTCTGGACCTCTTGAGTTTTTAGGGTCTCCTAT AAACGATAATTTTTAACCGATATTCAAACACAACTACAACTTGAATTTGA GAAATCATTTCGTAATTTAAAGAATACAGTAATCTTGAGAAAAGCTTAAA AGACAAAGGTGGGGCAAATACGCCAGAAATGGAACAAGATGCTTTAAAAG AGCTAAAAAGCGCAGTGTTAGAGCGCTTAAGTACAATGTTTTTACCAGAA TTTCTTAACCGTCTGGATGACATTATTGTATTTCAACCTTTAAAACCAGA AGAGTTGAGAAAAATATGTGACATCATGGTAAAAGTGTCGCGGATCGTGT GCAATTGAAGCAAATTGAATTGCAGGTAGATGAAAACGTTAAGTCAAAAC TAACTCGTGAAGGATATAATCCAATGTTTGGTGCCCGACCATTAAGAAGA TTAGTAACAAAATACGTGGAAGATTTAATTTCAGAAAGCTTATTAAAAAA TTCGGTGACAAAGAAAGGACGTGTAATTAAAATTGTTTTAAATGAGTATA ATCAAGTTGTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1346:25787..28697+

>mRNA_P-littoralis_Contig1346.5.1 ID=mRNA_P-littoralis_Contig1346.5.1|Name=mRNA_P-littoralis_Contig1346.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=408bp|location=Sequence derived from alignment at P-littoralis_Contig1346:25787..28697+ (Pylaiella littoralis U1_48)
ATGTCAGATGCTGAATTGTCCACAATTTATGCATTGCTTGGTTATTATTC
TACAGAGGCAGGTCGTGAATTTATGACGAATGTTGAGGATCCAGAACTTG
TTAAGCGCGCACGTAAGACGGGCGATTTTAGTGGGCTTAAAACGTATCAC
TCAACGAGAAATTCGAGAATTGTTGGCCGATATTACGGAATACCTTCAAT
CCATTTCAAGTTTGGAAACACAAAGCTTTCTAATTTAGAAAGTACATTAC
ATAAGCGTGTTATAGGACAAGAGGAGGCTATTTCTGCAATTGCAAAAGCA
ATTAAAAGATCAAGACTTGGCATTCAAAATCCAAATAGACCAATAGCAAG
CTTTTTATTTTGTGGGCCAACAGGGGGTAGGAAAAACGGAAGTTACAAAA
AGCGTTAG
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