mRNA_P-littoralis_Contig1346.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1346.4.1
Unique NamemRNA_P-littoralis_Contig1346.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A7S6PUZ6_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Pedospumella sp. Jangsampo120217C5 TaxID=2782409 RepID=A0A7S6PUZ6_9STRA)

HSP 1 Score: 650 bits (1676), Expect = 2.170e-230
Identity = 320/376 (85.11%), Postives = 345/376 (91.76%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQL-YTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGISL+ENKDN ++A+DAVFDSISV TTYK+KLAKTGVIF      + +   L  KYLGVVVPPGDNYFAALNSAVFTDGSFCYIP+N+KCPLELSTYFRINDKDSGQFERTLI+AEKG  VSYLEGCTAP FSENQLHAAVVELIAFD+A INYSTVQNWFQG++QGIGG+YNFVTKRGLC+GK+S+ITWTQVETGSSVTWKYPSC+LLG +SSGEFYSIALT NYQQADTGTKM+H+GE+TVSKIISKGISC  SKNTYRGLVKIC NA EARNFSQCDSFLIG FS ASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGI AEQAI LLI G+CKDV+ KLPMEFAQEANKLLELKLEGN+G
Sbjct:  110 LKTFEKLGISLKENKDNPQIAIDAVFDSISVGTTYKDKLAKTGVIFCSISDAIKHHPALIKKYLGVVVPPGDNYFAALNSAVFTDGSFCYIPKNIKCPLELSTYFRINDKDSGQFERTLIIAEKGSSVSYLEGCTAPKFSENQLHAAVVELIAFDSATINYSTVQNWFQGNEQGIGGIYNFVTKRGLCIGKNSKITWTQVETGSSVTWKYPSCVLLGKESSGEFYSIALTNNYQQADTGTKMVHIGEKTVSKIISKGISCGNSKNTYRGLVKICGNAVEARNFSQCDSFLIGPFSTASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGIKAEQAISLLITGYCKDVVVKLPMEFAQEANKLLELKLEGNVG 485          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A0D3MKC6_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Ochromonas sp. CCMP1393 TaxID=420556 RepID=A0A0D3MKC6_9STRA)

HSP 1 Score: 580 bits (1496), Expect = 7.120e-203
Identity = 286/376 (76.06%), Postives = 320/376 (85.11%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQL-YTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             +TFEKLGISLEE K  S VAVDAVFDS+S+ TTYKEKLAK GVIF      + Y   L  K+LG VV PGDN+FA+LNSAVFTDGSFCYIPQNV CPLELSTYFRINDKDSGQFERTLI+AEK   V+YLEGCTAP +SENQLHAA+VELIAF+NA I YSTVQNW+ GD++GIGG+YNFVTKRGLC+GK+S I+WTQVETGSS+TWKYPSC L+G  SSGEFYSIALT NYQQADTGTKMIH+GE T SKIISKGISC  SKN+YRGLVKI SNA  +RNFSQCDSFL+G+ S+A TYPY DIWNS S VEHEA ISK+SEEQLFYL QRGI+ EQA+ LLI GFCK+V+  LPMEFA EA+KLL LKLEG +G
Sbjct:  121 LRTFEKLGISLEEQKTLSNVAVDAVFDSVSIGTTYKEKLAKEGVIFCSISEAIQYYPKLVQKFLGTVVSPGDNFFASLNSAVFTDGSFCYIPQNVTCPLELSTYFRINDKDSGQFERTLIIAEKNSSVNYLEGCTAPQYSENQLHAAIVELIAFENANIKYSTVQNWYSGDEKGIGGIYNFVTKRGLCIGKNSNISWTQVETGSSITWKYPSCTLIGKGSSGEFYSIALTNNYQQADTGTKMIHLGEETTSKIISKGISCGSSKNSYRGLVKIASNANCSRNFSQCDSFLLGSSSLACTYPYLDIWNSTSIVEHEATISKVSEEQLFYLTQRGISVEQAVGLLINGFCKEVVTMLPMEFATEADKLLSLKLEGTVG 496          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A3G2QZR8_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Neotessella volvocina TaxID=2419522 RepID=A0A3G2QZR8_9STRA)

HSP 1 Score: 572 bits (1473), Expect = 1.390e-199
Identity = 285/376 (75.80%), Postives = 320/376 (85.11%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQL-YTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
              TFEKLGISL+E K  + VA+DAVFDSIS+ATT+KEKL K+GVIF      + Y   L  K+LG VV  GDN+FAALNS+VF+DGSFCYIPQNV CPLELSTYFRINDKD+GQFERTLI+AEK  FVSYLEGCTAP FSENQLHAA+VELIAF+NA I YSTVQNW+ G+K+GIGG+YNFVTKRG+C+GK S I+W QVETGSS+TWKYPSCILLGN + GEFYS+ALT NYQQADTGTKMIH+G++T SKIISKGISC  SKN+YRGLVKI S A  ARNFSQCDSFLIG+ S ASTYPY DI NS + +EHEAKISK+SEEQLFYL QRGINAEQAI LL+ GFCKDV  KLPMEFA EA+KLL LKLEG IG
Sbjct:  108 LNTFEKLGISLDEQKRLTNVAIDAVFDSISIATTFKEKLGKSGVIFCSISEAIEYYPELIKKFLGSVVSSGDNFFAALNSSVFSDGSFCYIPQNVICPLELSTYFRINDKDAGQFERTLIIAEKNSFVSYLEGCTAPQFSENQLHAAIVELIAFENAKIKYSTVQNWYSGNKEGIGGIYNFVTKRGICLGKKSEISWLQVETGSSITWKYPSCILLGNNAFGEFYSVALTNNYQQADTGTKMIHLGKKTKSKIISKGISCGNSKNSYRGLVKIGSEANYARNFSQCDSFLIGSSSTASTYPYIDIKNSTAIIEHEAKISKVSEEQLFYLYQRGINAEQAISLLLSGFCKDVFTKLPMEFASEADKLLALKLEGTIG 483          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A3G2QZE7_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Synura uvella TaxID=52557 RepID=A0A3G2QZE7_9STRA)

HSP 1 Score: 570 bits (1469), Expect = 6.060e-199
Identity = 282/377 (74.80%), Postives = 323/377 (85.68%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALF--LTQLYTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGI+L+E K  S VAVDAVFDS+S+ TT+KEKLAK GVIF       Q Y  L+  K+LG VV  GDN+FA+LNS+VF+DGSFCYIPQNV+CPLELSTYFRINDK++GQFERTLI+AEK   V+YLEGCTAP +SENQLHAA+VELIAF+NA I YSTVQNW+ G++ GIGG+YNFVTKRGLC+GK+S I+WTQVETGSS+TWKYPSCIL+G  SSGEFYS+ALT N+QQADTGTKMIH+G++T SKIISKGISC  SKN+YRGLVK+ SNA  +RNFSQCDSFLIG+ S+ASTYPY DIWNS S VEHEAKISKISE+QLFYL QRGIN EQAI LLI GFCKDV   LPMEFA EA+KLL LKLEG +G
Sbjct:  110 LKTFEKLGIALDEQKKLSNVAVDAVFDSVSIGTTFKEKLAKFGVIFCSISEAIQFYPNLIE-KFLGTVVSSGDNFFASLNSSVFSDGSFCYIPQNVECPLELSTYFRINDKEAGQFERTLIIAEKNSSVNYLEGCTAPQYSENQLHAAIVELIAFENAKIKYSTVQNWYSGNEIGIGGIYNFVTKRGLCIGKNSSISWTQVETGSSITWKYPSCILVGENSSGEFYSVALTNNFQQADTGTKMIHLGKKTKSKIISKGISCGNSKNSYRGLVKMSSNAFLSRNFSQCDSFLIGSSSVASTYPYLDIWNSSSIVEHEAKISKISEDQLFYLMQRGINLEQAISLLISGFCKDVFTNLPMEFATEADKLLSLKLEGTVG 485          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A3G2QZH6_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Mallomonas splendens TaxID=52552 RepID=A0A3G2QZH6_9STRA)

HSP 1 Score: 570 bits (1468), Expect = 8.590e-199
Identity = 283/377 (75.07%), Postives = 322/377 (85.41%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALF--LTQLYTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGISL+E K  S VAVDAVFDSIS+ATT+KEKLAK GVIF       + Y  L+  K+LG VV  GDN+FAALNS+VF+DGSFC+IPQNV CPLELSTYFRINDK++GQFERTLI+AEK   V+YLEGCTAP +SENQLHAA+VELIAF+NA I YSTVQNW+ G++ GIGG+YNFVTKRGLC+GK+S I+WTQVETGSS+TWKYPSC+L+G  SSGEFYS+ALT NYQQADTGTKMIH+G++T SKIISKGISC  SKN+YRGLVKI SNA  +RNFSQCDSFLIG  S ASTYPY DIWN+ S VEHEAKISKISE+QLFYL QRGIN EQ+I LLI GFCK+V  KLPMEFA EA+KLL LKLEG +G
Sbjct:  110 LKTFEKLGISLDEQKKLSNVAVDAVFDSISIATTFKEKLAKYGVIFCSISEAIEFYPNLVE-KFLGTVVSSGDNFFAALNSSVFSDGSFCFIPQNVNCPLELSTYFRINDKEAGQFERTLIIAEKNSSVNYLEGCTAPQYSENQLHAAIVELIAFENAKIKYSTVQNWYSGNEFGIGGIYNFVTKRGLCLGKNSNISWTQVETGSSITWKYPSCLLVGANSSGEFYSVALTNNYQQADTGTKMIHLGQKTKSKIISKGISCGNSKNSYRGLVKISSNASYSRNFSQCDSFLIGTSSTASTYPYLDIWNATSIVEHEAKISKISEDQLFYLMQRGINIEQSISLLISGFCKEVFTKLPMEFATEADKLLSLKLEGTVG 485          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A3G2QYM6_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A3G2QYM6_9STRA)

HSP 1 Score: 567 bits (1461), Expect = 9.930e-198
Identity = 283/377 (75.07%), Postives = 319/377 (84.62%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALF--LTQLYTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGISL+E K  S VAVDAVFDSIS+ TT+KEKLAK GVIF       Q Y  L+  K+LG VV  GDN+FAALNSAVF+DGSFCYIPQN  CPLELSTYFRINDK++GQFERTLI+AEK   V+YLEGCTAP FSENQLHAA+VELI F+NA INYSTVQNW+ G++ GIGG++NFVTKRGLC+GK+S I+WTQVETGSS+TWKYPSC+LLG  +SGEFYS+ALT +YQQADTGTKM+H G++T SKIISKGISC  SKN+YRGLVK+  NA  +RNFSQCDSFLIG+ S+ASTYPY DI NS S VEHEAKISKISEEQLFYL QRGIN EQA+ LLI GFCKDV  KLPMEFA EA+KLL LKLEG IG
Sbjct:  110 LKTFEKLGISLDEQKKLSNVAVDAVFDSISIGTTFKEKLAKFGVIFCSISEAIQFYPKLVE-KFLGSVVSSGDNFFAALNSAVFSDGSFCYIPQNTTCPLELSTYFRINDKEAGQFERTLIIAEKNSSVNYLEGCTAPQFSENQLHAAIVELITFENAKINYSTVQNWYSGNELGIGGIFNFVTKRGLCLGKNSSISWTQVETGSSITWKYPSCVLLGTNTSGEFYSVALTNHYQQADTGTKMLHFGQKTKSKIISKGISCGNSKNSYRGLVKMSENAAYSRNFSQCDSFLIGSLSLASTYPYLDIRNSTSIVEHEAKISKISEEQLFYLTQRGINLEQAVSLLISGFCKDVFTKLPMEFATEADKLLSLKLEGTIG 485          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A3G2QYT8_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Synura sphagnicola TaxID=52556 RepID=A0A3G2QYT8_9STRA)

HSP 1 Score: 554 bits (1428), Expect = 9.760e-193
Identity = 269/376 (71.54%), Postives = 318/376 (84.57%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQL-YTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGISL+E K  S VA+DAVFDS+S+ATT+KEKLAK+G+IF      + Y   L  K+LG VVPP DN++AALNSAVF+DGSFCYIPQN  CPL+LSTYFRINDK+SGQFERTLI+AEK   ++YLEGCTAP FS NQLHAA+VE+IAF+NA +NYST+QNW+ GD++GIGG+YNFVTKR +C+GK++ + W QVETGS++TWKYPSCIL+G  SSG+FYS+ALT NYQQADTGTKMIH+G++T SKIISKGISC  SKN+YRGLVK+ SNA  +RNFSQCDSFLIG+ S+ASTYPY DI NS S VEHEA ISKISE+QLFY  QRGIN EQ+I LLI GFCK+V   LPMEFA EA+KLL LKLEG +G
Sbjct:  109 LKTFEKLGISLDEQKKLSNVAIDAVFDSVSIATTFKEKLAKSGIIFCSISEAIEYYPNLVNKFLGSVVPPNDNFYAALNSAVFSDGSFCYIPQNTICPLDLSTYFRINDKESGQFERTLIIAEKNSSLNYLEGCTAPQFSSNQLHAAIVEIIAFENAKVNYSTIQNWYSGDEKGIGGIYNFVTKRAICLGKNATVRWVQVETGSAITWKYPSCILVGTNSSGQFYSVALTNNYQQADTGTKMIHLGKKTKSKIISKGISCGHSKNSYRGLVKMNSNASFSRNFSQCDSFLIGSSSMASTYPYLDIRNSTSIVEHEATISKISEDQLFYFLQRGINMEQSISLLISGFCKEVFTNLPMEFATEADKLLSLKLEGTVG 484          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A7S6PV34_9STRA (Iron-sulfur cluster formation ABC transporter n=1 Tax=Poteriospumella lacustris TaxID=1117027 RepID=A0A7S6PV34_9STRA)

HSP 1 Score: 544 bits (1402), Expect = 6.730e-189
Identity = 266/376 (70.74%), Postives = 314/376 (83.51%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQLYTIL-L**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGISL E K  + VA+DAVFDS S+ATTYKEKLAK GVIF      +     L  KYLG+VVPPGDN+FAALNSAVF+DGSFCY+P+NVKCPLELSTYFRIND +SGQFERTLI+ EK G + YLEGCTAP  SENQLHAA+VELIAF+NA I YSTVQNW+ GD  G GG+YNFVTKRGLC+GK ++I+WTQVETGS++TWKYPSCIL+G+ SSG+FYSIALT NYQQ+DTGTKMIH+G+ T S I+SKGIS   SKN YRGLVKI S A  +RNFSQCDSFL+G+ + ASTYPY D +NS S +EHEAK+SK+++EQLFYL QRG++A QA+ L++ GFCK+V+  LPMEFA EA+KLL LKLEG+IG
Sbjct:  102 LKTFEKLGISLNEQKKLANVAIDAVFDSESIATTYKEKLAKAGVIFCSISEAIKEFPELVRKYLGLVVPPGDNFFAALNSAVFSDGSFCYVPKNVKCPLELSTYFRINDTESGQFERTLIIVEKNGSLKYLEGCTAPQHSENQLHAAIVELIAFENAAIEYSTVQNWYSGDSDGKGGIYNFVTKRGLCLGKKAQISWTQVETGSAITWKYPSCILVGDNSSGKFYSIALTNNYQQSDTGTKMIHLGKNTNSLILSKGISAGFSKNCYRGLVKITSKANFSRNFSQCDSFLLGSSTFASTYPYIDNFNSSSIIEHEAKVSKLTDEQLFYLTQRGLSANQAVGLIVNGFCKEVMVMLPMEFASEADKLLSLKLEGSIG 477          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: C6KIT8_9STRA (ABC transporter n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=C6KIT8_9STRA)

HSP 1 Score: 540 bits (1390), Expect = 4.940e-187
Identity = 266/377 (70.56%), Postives = 312/377 (82.76%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQL--YTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             KTFEKLGISL E K  + VAVDAVFDS+S+ATT+K++L+K GVIF      +  Y  L+  +YLG VVPPGDNYFAALNSAVF+DGSFCY+P+NVKCP+ELSTYFRIND +SGQFERTL++AEK  +VSYLEGCTAP    NQLHAA+VEL+A DNA I YSTVQNW+ GD+ G+GG+YNFVTKRGLC GK+S+I+WTQ+ETGS++TWKYPSCIL G+ SSGEFYS+ALT NYQQADTGTKMIH+G  T S IISKGIS   SKN+YRG VK+ S A+ ARNFSQCDS LIG  S A+T+PY D+ NS SKVEHEA +SKI EEQLFY AQRGI+ E AI +LI GFCKDV  KLPMEF+ EA+KLL LKLEG++G
Sbjct:  105 IKTFEKLGISLNEQKRLANVAVDAVFDSVSIATTFKKELSKYGVIFCSISEAIEKYPKLVK-EYLGKVVPPGDNYFAALNSAVFSDGSFCYVPKNVKCPIELSTYFRINDMESGQFERTLLIAEKNSYVSYLEGCTAPQRDVNQLHAAIVELVALDNAEIKYSTVQNWYAGDEDGLGGIYNFVTKRGLCAGKNSKISWTQIETGSAITWKYPSCILAGDNSSGEFYSVALTSNYQQADTGTKMIHIGNNTRSTIISKGISTGFSKNSYRGQVKVQSKAQNARNFSQCDSLLIGDKSNANTFPYIDVKNSTSKVEHEASVSKIGEEQLFYFAQRGIDNEDAISMLISGFCKDVFLKLPMEFSVEADKLLSLKLEGSVG 480          
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Match: A0A520D119_9SPHI (Fe-S cluster assembly protein SufB n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A520D119_9SPHI)

HSP 1 Score: 533 bits (1372), Expect = 3.760e-184
Identity = 265/377 (70.29%), Postives = 310/377 (82.23%), Query Frame = 2
Query:  329 FKTFEKLGISLEENKDNSRVAVDAVFDSISVATTYKEKLAKTGVIFALFLTQL--YTILL**KYLGVVVPPGDNYFAALNSAVFTDGSFCYIPQNVKCPLELSTYFRINDKDSGQFERTLIVAEKGGFVSYLEGCTAPNFSENQLHAAVVELIAFDNAIINYSTVQNWFQGDKQGIGGVYNFVTKRGLCVGKSSRITWTQVETGSSVTWKYPSCILLGNKSSGEFYSIALTKNYQQADTGTKMIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLIGAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAICLLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG 1453
             +TFEKLGISL+E K  S VAVDA+FDSIS+ TTYKEKLAK GVIF      +  Y  L+  K+LG VVP  DN+FAALNSAVFTDGSFCYIP+N KCPLELSTYFRINDK SGQFERTLI+ E    VSYLEGCTAP + ENQLHAA+VELIAF N+ I YSTVQNW+ GD+ G GG+YNFVTKRG+C+G+++RI+W QVETGS++TWKYPSC+L G KS GEFYSIALT ++QQADTGTKMIH G++T SKIISKGIS  KSKN+YRGLVKI S A  +RNFSQCDSFL+G+ S ASTYPY  + N+ S +EHEA ISK++E+QLFYL QRGI  E+A+ LLI GFCKDV+  LPMEFA EA+KLL LKLEG++G
Sbjct:  115 LRTFEKLGISLDEQKKLSNVAVDAIFDSISIGTTYKEKLAKAGVIFCSISEAIKEYPELVK-KFLGSVVPSNDNFFAALNSAVFTDGSFCYIPKNTKCPLELSTYFRINDKVSGQFERTLIITETNSEVSYLEGCTAPQYDENQLHAAIVELIAFANSSIRYSTVQNWYSGDEHGKGGIYNFVTKRGICIGENARISWAQVETGSAITWKYPSCVLFGKKSKGEFYSIALTNHFQQADTGTKMIHFGQKTRSKIISKGISSGKSKNSYRGLVKINSTAHLSRNFSQCDSFLLGSNSKASTYPYLLLQNTSSIIEHEASISKLNEDQLFYLLQRGIELEKAVSLLINGFCKDVMTMLPMEFALEADKLLSLKLEGSVG 490          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1346.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6PUZ6_9STRA2.170e-23085.11Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A0D3MKC6_9STRA7.120e-20376.06Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A3G2QZR8_9STRA1.390e-19975.80Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A3G2QZE7_9STRA6.060e-19974.80Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A3G2QZH6_9STRA8.590e-19975.07Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A3G2QYM6_9STRA9.930e-19875.07Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A3G2QYT8_9STRA9.760e-19371.54Iron-sulfur cluster formation ABC transporter n=1 ... [more]
A0A7S6PV34_9STRA6.730e-18970.74Iron-sulfur cluster formation ABC transporter n=1 ... [more]
C6KIT8_9STRA4.940e-18770.56ABC transporter n=1 Tax=Aureoumbra lagunensis TaxI... [more]
A0A520D119_9SPHI3.760e-18470.29Fe-S cluster assembly protein SufB n=1 Tax=Pedobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1346contigP-littoralis_Contig1346:22814..24269 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1173263.Syn7502_03067
Preferred namesufB
PFAMsUPF0051
Model size1456
Max annot lvl1117|Cyanobacteria
KEGG koko:K09014
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.48e-52
EggNOG OGsCOG0719@1|root,COG0719@2|Bacteria,1G0TH@1117|Cyanobacteria,1GYSC@1129|Synechococcus
DescriptionFeS assembly protein SufB
Cds size408
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789619.5721304-CDS-P-littoralis_Contig1346:22813..232211680789619.5721304-CDS-P-littoralis_Contig1346:22813..23221Pylaiella littoralis U1_48CDSP-littoralis_Contig1346 22814..23221 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789619.5818536-UTR-P-littoralis_Contig1346:23221..242691680789619.5818536-UTR-P-littoralis_Contig1346:23221..24269Pylaiella littoralis U1_48UTRP-littoralis_Contig1346 23222..24269 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1346.4.1prot_P-littoralis_Contig1346.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1346 22814..23221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1346.4.1

>prot_P-littoralis_Contig1346.4.1 ID=prot_P-littoralis_Contig1346.4.1|Name=mRNA_P-littoralis_Contig1346.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=136bp
MIHVGERTVSKIISKGISCDKSKNTYRGLVKICSNAREARNFSQCDSFLI
GAFSIASTYPYFDIWNSLSKVEHEAKISKISEEQLFYLAQRGINAEQAIC
LLIGGFCKDVIGKLPMEFAQEANKLLELKLEGNIG*
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mRNA from alignment at P-littoralis_Contig1346:22814..24269-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1346.4.1 ID=mRNA_P-littoralis_Contig1346.4.1|Name=mRNA_P-littoralis_Contig1346.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1456bp|location=Sequence derived from alignment at P-littoralis_Contig1346:22814..24269- (Pylaiella littoralis U1_48)
TATATGAACGATAGAAAATACAAAATAAATTACGGTTTAAATAAAATATT ATTTCAAAAATATAAGCACGGTTTTACAACAAAAATAGAAAAAGAATCTT TTCGACCTGGCTTGAATTTAGATACTTTAAAATCTATTTCAAAAAACGAA ATGATCCTTACTTTATAAGTAAATTCAGACAAAATGCCTACATTAAATGG ATAAAAATGGAATTTCCGCTTTGGGGCAATTTAAAAATAAAGCCAATAAG CGTTGAAAACATTACGTTTTGCTCCATACCCAAACGAAGGAAAATTCAAC CTAATGGGGAGCAATTAGATAATAAAATTTTAAAACGTTTGAAAAACTTG GAATATCATTAGAAGAGAATAAAGATAATTCTCGTGTTGCTGTAGACGCA GTCTTTGACAGCATTTCTGTTGCGACCACGTATAAAGAGAAATTAGCAAA AACAGGTGTAATTTTTGCTCTATTTCTGACGCAATTATACACTATCCTAC TTTAATAAAAATATTTAGGGGTAGTCGTGCCTCCAGGTGATAATTATTTT GCAGCGCTAAACTCAGCAGTATTTACAGATGGTTCCTTTTGTTATATACC TCAAAATGTAAAATGCCCTTTAGAATTATCGACATATTTTCGTATAAATG ATAAAGATTCTGGGCAATTTGAACGCACGCTTATAGTTGCAGAGAAGGGA GGCTTTGTTAGTTACTTAGAAGGGTGCACCGCACCAAATTTTAGTGAAAA TCAGCTCCACGCTGCAGTTGTTGAATTAATTGCCTTCGATAACGCAATAA TTAATTATTCTACGGTTCAAAATTGGTTTCAAGGAGATAAGCAAGGCATT GGAGGAGTTTATAATTTCGTTACGAAAAGAGGGCTATGCGTTGGAAAAAG TTCTAGGATTACATGGACGCAGGTTGAAACAGGGTCTTCAGTGACTTGGA AATATCCTAGTTGCATTTTACTAGGTAATAAATCTAGTGGTGAGTTTTAT TCTATAGCTTTAACAAAGAATTATCAGCAAGCAGATACAGGAACCAAAAT GATACATGTAGGTGAAAGAACAGTAAGCAAAATAATATCTAAAGGAATTT CTTGTGACAAATCGAAAAATACGTATAGGGGTCTAGTCAAAATTTGTAGC AATGCCAGAGAGGCGCGAAACTTTTCGCAATGCGATTCGTTTTTAATAGG CGCTTTTTCTATTGCTTCAACATATCCTTATTTTGATATTTGGAATTCTT TATCAAAAGTTGAGCATGAAGCAAAAATCTCAAAAATTAGTGAAGAGCAG CTTTTTTACTTGGCTCAAAGGGGGATTAACGCTGAACAGGCAATTTGTCT TCTTATAGGTGGTTTTTGTAAAGACGTTATTGGAAAGCTACCAATGGAGT TCGCGCAAGAGGCCAATAAATTGCTTGAATTGAAATTAGAAGGAAACATT GGATAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1346:22814..24269-

>mRNA_P-littoralis_Contig1346.4.1 ID=mRNA_P-littoralis_Contig1346.4.1|Name=mRNA_P-littoralis_Contig1346.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=408bp|location=Sequence derived from alignment at P-littoralis_Contig1346:22814..24269- (Pylaiella littoralis U1_48)
ATGATACATGTAGGTGAAAGAACAGTAAGCAAAATAATATCTAAAGGAAT
TTCTTGTGACAAATCGAAAAATACGTATAGGGGTCTAGTCAAAATTTGTA
GCAATGCCAGAGAGGCGCGAAACTTTTCGCAATGCGATTCGTTTTTAATA
GGCGCTTTTTCTATTGCTTCAACATATCCTTATTTTGATATTTGGAATTC
TTTATCAAAAGTTGAGCATGAAGCAAAAATCTCAAAAATTAGTGAAGAGC
AGCTTTTTTACTTGGCTCAAAGGGGGATTAACGCTGAACAGGCAATTTGT
CTTCTTATAGGTGGTTTTTGTAAAGACGTTATTGGAAAGCTACCAATGGA
GTTCGCGCAAGAGGCCAATAAATTGCTTGAATTGAAATTAGAAGGAAACA
TTGGATAA
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