mRNA_P-littoralis_Contig1346.2.2 (mRNA) Pylaiella littoralis U1_48

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A7S6PV05_9STRA (DNA-directed RNA polymerase n=1 Tax=Pedospumella sp. Jangsampo120217C5 TaxID=2782409 RepID=A0A7S6PV05_9STRA)

HSP 1 Score: 939 bits (2427), Expect = 1.010e-306
Identity = 588/1128 (52.13%), Postives = 705/1128 (62.50%), Query Frame = 3

Query: 4890 MFIANTITKKALETIVHETFLSLGSVPSSLLLDSLKLLGFYYATNAGISINIEDLKTPHKKEALIELAVKEIKIISKDWEKGTISDAERFQSIIDSWTVATESLKTKILKHYKNFDPTNNLHIMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREVNCKSTTGIILLLNRKNNIQNIIGRFLISAKDKKSNTFIKEYKNTIITTSAAKKLRNLAPIVLNLRSPLSCSASGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQLLHLFLENS*SQKQ*KRFVSNKPWAYCS*ITTDNKNINYKLV-WF--KKDIILDAGSFLYKLTSTFIKKGFNSG*NRKCV------RIRNWTTKTYTYT*FRRG*I**SSFTANK*RK*I*N*DKSRRGRAVGCRR*NFSTAKRSRI*KPKNLKVKSLFAELKLCTPYEGIFNYLEPRILISGSITNISFNAVKILIL**TVALK*QFIRKTISM*INLPF*LR*IYTKCNRWTNLLYT*KKLFPNDYIFFNNGI*RLENLFRSIKK*YCYKTKQNFSC*KSKF**YFSKETWNIV--------KRDGLHYFFKK*A--LIS*AAALYCNRSKMILFTR*ATWVISYL**PNGRYCSRFTENRRIN*GAYS*R*S*ASSTIWRFIRF*C*SNVFCNNRYERSTFWAIC*RG*CNAR----------GSFCREECP*TKIC*RNLCT*YLFKKKLFYMVVVYGMRFRYPRILF---LQ*YREK*I*FHKSRWLYFRNKH*R*E---NKLNLVKYRYFRHRGETAQCFVLRKERSQQYNIR-----FKNKSACDCIVELRNGKFIYLEPVEPITSYAIPLNARMLFEPGSFVDIGEPFTSGSIDPHELLNILFHYHCRLDGLLGGYLV*KIPINTNEFYFIH--L*VTKC*NIKQTY*NF---GSPDDCKCSYQIRGDTPLFPGECVKFSLILEICQALNVAKDRKCSKVPKFEPIFLSATNTSLSKDGFLSAAGFQETKRILTKAAIEGKTDWLRGLKECALLGRLMPAGSSFLNYKGYLDNIYLFKD 8138
            MFI NTITKKALETIVHETFL+LGSVPSS LLDSLKLLGFYYATNAGISINIEDLKTP++KE LIE A++EI  ISKDWE G ISDAERFQSIIDSWT+ATESLKTKILKHYKNFDPTNNLH+MAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIRE++CKST G+ILLLN+KNN+QNIIGR L SAKDKKS  F++ YKNT+ITT+ +K L+NLAPI+LNLRSPL+C A+GSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQ+   F          K  VS +  ++   +    + I   ++ WF  KKDIILDAGSFLYK  STF+KKG        CV      R++    + +    F    +           K   N ++     A G     F   K ++    +NLK+   FAELKLCTP EG+FNY +PRI I+GS  NISF+AVKI       + K     +              I    N + NL  T  K++      F++ I         + K +  + K N S  ++K     ++   NI+        KRDGLHYFF+K +   +S    L   ++  +        +++Y         S  TE+  I  G         +       +    S V  N++  R+    I       ++          G +  +     K    NL      K +LF         F  P       +Q   E     +    L    K  +     + + L+  +   +  + A         S++Y I+     FKNK  CDCI+EL  GKFIYLE VEPI  Y+I LNAR+L EPGS++DIGEPFTSG IDPHELLN+LFHYH RLDGL+ G L     +   +   ++  L + +  N+K +  +              +  GDTPL PGE +KFSL+LEIC+AL +AK  + SK+PKFEPIFLSATN SLSKDGFLSAAGFQETKRILTKAAIEGK DWLRGLKECAL+GRLMPAGS+FLNYK YLDNIYLFKD
Sbjct:    1 MFITNTITKKALETIVHETFLNLGSVPSSSLLDSLKLLGFYYATNAGISINIEDLKTPNEKEKLIEFAIEEINTISKDWESGAISDAERFQSIIDSWTIATESLKTKILKHYKNFDPTNNLHVMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREIDCKSTAGVILLLNKKNNVQNIIGRVLNSAKDKKSKIFLENYKNTVITTNISKNLKNLAPIILNLRSPLTCLANGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQIFAPFSGKLVIPDTVKS-VSYRT-SHGDIVAKLQQQIKISIISWFGLKKDIILDAGSFLYKQDSTFVKKGALIADQSVCVSASGPGRLKPIYARNFGEIRFENLLL--RQINRENKPKVKVNQEEGVLWVAAGK---IFPLPKEAKYKNVQNLKINKSFAELKLCTPQEGVFNYTKPRISIAGSAANISFDAVKIFDSLTNCSSKVIIYPQNYQYVDKFT-----ILATLNIYPNL--TGGKIYSIRRKSFSHTITHFLITESDVWKLHSDQLKGNVSVKENKIFRARNQNFNNIIVNKPGILLKRDGLHYFFQKVSPYFLSSGTLLQQKQNDFVCKNDQLGSLVTY---------SNQTED--IVQGLPKIEELIEARVPREKAKLARQSGVLLNSKSGRAHHTTISREKMLLSQYIPDVDIIFEGPYTDKNVLKPKFTVANLVHSICSKSRLFLYDNNLWKAFPLPPQFIPIAVQGKNEFYFINNAGSILGINTKGKKISPTWSNIPLLDKKVNSYNSKNALS-------SEKYAIKNIISAFKNKKTCDCILELERGKFIYLELVEPIAKYSISLNARLLVEPGSYIDIGEPFTSGLIDPHELLNLLFHYHSRLDGLIVGSLY---GVKKFQLILVNSILSIYESQNVKISSKHIEILARQMTANVRIKYGGDTPLLPGEYIKFSLMLEICKALGLAKGTRGSKIPKFEPIFLSATNASLSKDGFLSAAGFQETKRILTKAAIEGKADWLRGLKECALIGRLMPAGSAFLNYKVYLDNIYLFKD 1093          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A7S6PUY3_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pedospumella sp. Jangsampo120217C5 TaxID=2782409 RepID=A0A7S6PUY3_9STRA)

HSP 1 Score: 697 bits (1798), Expect = 3.340e-222
Identity = 381/564 (67.55%), Postives = 415/564 (73.58%), Query Frame = 1

Query: 3286 KGIPNYFTTILK-----LNYLKIRKIIYFKENILYPNQNQESFQQNNTFSSAKN--ELAPFLLKNKSLTWKRTLLFQQCEAEIWRKKN*KVLKQ*KLY*EHLNLKTEIKKARSFIDANFLNDLKQEPVLIRSLLRRIRILESFLATGTNPSWMVLTTLPVLPPTLRPLVELENGHLVAADVNEIYRLIITPKSAASRFLYKYDAPDLITIQGKKLLQESVDSLIDNARLQKNKMFCLNNKPLKV*LKF*KENKGGFVNHC*EKE*ITRADL*LLLDHH*V*TRLAYRMKWQRSYFN-LLINELFKTRLGYAKFSAKQAQIIIKKNKPLVWSLLEKLAKKHCILLNRAPTLHRYGIQAFDPIIVLGKSIHLHPLVCSGFNADFDGDQMAIHLPLYESSQLEARSMMRPVHNILSSSNGEIILKPAQDVVIGCYYLTLMTKKNTFQLKKWFSNEIEALSAYYQKILSLHTPILVRYSISHAQAKMADKQLF-------------------------NKCYFICNIGVIIGYLEKAKKNDAYIITDLLLETTPGRLIFNNNFKILVK 4878
            KGIPNYFTTILK     L   K+ KIIYFKENI + NQ +E+FQ +N  S   N  ELAPF    K    +   +F      +  KK  K  +  K   EHLNLK EIKKARSFID  FL+DLKQEPVLIRSL+RRIRILESFLAT TNPSWMVLTTLPVLPPTLRPLVELENG LVAADVNEIYRLIIT     + FLYKYDAP LITIQGKKLLQESVDSLIDNARL KNKMFCLNNKPLK   +  +  +G F      K         +++        +    +     F   LINEL KT+ G  KFSAKQAQ I+KKNKPLVWSLL KLAKK+C+LLNRAPTLHRYGIQAFDP IVLGKSIHLHPLVCSGFNADFDGDQMA+HLPLYESSQLEARSMMRPVHNILSSSNGEIILKPAQDVVIGCYYLTLM K NTFQLKKWFSNE++ALSAYYQK LS+HTPILVRYSIS A+AK+ +KQL                          NKCYFICNIGV+IGYLEK    D Y +TDLLLETTPGRLIFNNNFK+L K
Sbjct:  133 KGIPNYFTTILKCLDEDLTTSKLEKIIYFKENIPHQNQLEETFQIDNFVSPQLNVNELAPFFAHEKKSEKENNTIFYSGAKNLLAKKELKGAEALKTALEHLNLKAEIKKARSFIDTVFLDDLKQEPVLIRSLVRRIRILESFLATNTNPSWMVLTTLPVLPPTLRPLVELENGRLVAADVNEIYRLIITRNQRLADFLYKYDAPGLITIQGKKLLQESVDSLIDNARLPKNKMFCLNNKPLKSLTEILEGKQGRFRQSLLGKRVDYSGRSVIIVGPTLSLNEVGLPYEMAAELFQPFLINELLKTKPGCVKFSAKQAQTIVKKNKPLVWSLLGKLAKKYCVLLNRAPTLHRYGIQAFDPTIVLGKSIHLHPLVCSGFNADFDGDQMAVHLPLYESSQLEARSMMRPVHNILSSSNGEIILKPAQDVVIGCYYLTLMVKNNTFQLKKWFSNEVDALSAYYQKKLSIHTPILVRYSISCAKAKIVEKQLIFLNNSNNLLNKSVFIYQAFKPLGTTNKCYFICNIGVLIGYLEKENNIDVYKVTDLLLETTPGRLIFNNNFKMLKK 696          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A7S6PUZ9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pedospumella sp. Jangsampo120217C5 TaxID=2782409 RepID=A0A7S6PUZ9_9STRA)

HSP 1 Score: 710 bits (1833), Expect = 1.340e-220
Identity = 473/933 (50.70%), Postives = 538/933 (57.66%), Query Frame = 1

Query:    1 FLGELPLMTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWTNL------------------------------ESKEKKEDLDQDKIFFTIYWIIIKYHQRNIRQY---KASLLFEAQQLTQESKKAANFYL-KRKT*K**GTPSLSKKSVFNSQK*LLFYWKNWEI*NKQKTKFKLIFKYNQLNWPRFI-------------RNCGWINRIKILRSS***HRPYKT*ANS---TCW*AATKSIPNRAV*ASKTFKN*SRNGKLV*SNDWVLDPRPLTAAMKKNFFKASQLSQFMDQVNPLSELTHRRKLA-FLA*WVKTRPY*YYYTRYSSQPIWKALPN*NTGGKVQG*CHLLQCLVVLALLGG*KHLILPLK-MNL*NLIEMLFLDPEQESKTSVAFADICLNKKVQ*YHRLYQQKQLF-FLVTKSNDVNFITTSPCK*CH*PQR*FHLLSMMMQIELLWVQICSGRQYPWFIHKSLLLVQVLNQPQF*IRAL**KHIAPRTRTRCVK*FNNGC*YKRAANPLFYASFSVLIKKLVLIKDQSFGQESTYFLDKLLQMGQAQMMESL--H*VKI*SLRTCRGKDII----------YEDAIVINERLVFEDTLTSLHIEEYEVCLGQIHTQSEKLTSKIPFATTHTTRHLDSSGVVKIGSYVNEGDILVGKLTPCEEDTSPEAKLLKALYGQKKQSYRDTSLCVSSGTEGRVVDIRVMSASLLNKSAQKPTAFSETIRIFIAHIRKIKVGDKLAGRHGNKGVISRILASQDMPNLPDGTPVDIILNPLGVPSRMNVGQIFECLLGLAGAKAGKRFKVTPFDEIFGGEASRVLINQKLKEAAIIANENWIFNSYSPGK*CYKMVEPG-IF**PNYSRKKLYIKACPFS*R*DSRSCDRPYSMIAEQPLAGKSQK 2601
            FLGELPLMTEEGTFIINGYERIVISQIIRSPGLYFRKEL+TPRKT+YTATLISDKGLWT                                ESKEKKED DQDKIF  IY ++  Y   +   Y   K  LLFEAQQLTQESKK+  F   K K         L KKS FNS+       K       +K    L      L     +             R    I+ IK  +      RP      +   T      KSI   +   SK  K     G L   NDWVLDPRPLTAAMK+ FFKASQLSQFMDQ+NPLSELTHRRK++ F    +K                 K  P     G+  G    +     ++ LG  +      K  +L    + +FLD EQESKT+VAFADICLNKK          K  + FLV KS DVNFITTSP +          ++S+   +        + R       +   +  + +Q       +  +  A       +K ++ G     ++N +  A  +       L K Q   QE++     ++  G+      +              GK++I          YEDAIVINERLVFEDTLTSLHIEEYE CLGQ    SEKLTSK+PFAT H  RHLD SG+VKIGSYV E D+LVGKLTPCEEDTSPEAKLLKALYGQKKQSYRDTSLCVS GTEGRVVDIR+MSAS LNK+AQ P AFSETIRI+IAHIRKIKVGDKLAGRHGNKGVISRILA QDMP+LPDGTPVDIILNPLGVPSRMNVGQIFECLLGLAGAK GKRFKVTPFDEIFG EASRVLINQKLKEAAI   ENWIFNSYSPGK   +    G  F  P    K   +K               PYSMIAEQPLAGKSQ+
Sbjct:  134 FLGELPLMTEEGTFIINGYERIVISQIIRSPGLYFRKELVTPRKTVYTATLISDKGLWTKFILDEKINKQTKRFEKDRIYLKLNEFKAHSPESKEKKEDSDQDKIF--IYDLLHYYKISSKEIYDNLKHPLLFEAQQLTQESKKSGEFLSQKEKLKSSEEIDLLLKKSFFNSRNSCFSVGKIGRYRINKKLGLNLSSNLTNLTGRDLLGIIDGLIELKYYDRPNDDIDHIKHKQI-----RPVGELLQNQFRTGLFRLQKSILESSPFTSKPLKINLEMGNLSKPNDWVLDPRPLTAAMKE-FFKASQLSQFMDQINPLSELTHRRKISVFGPNGLKRDRISTVIRDIHPSQYGKLCPIETPEGQSAGLMSSIAMFGRVSSLGWIETPYFAFKDESLEYNRQAIFLDAEQESKTNVAFADICLNKKGSIISSTVSTKNNYSFLVKKSKDVNFITTSPLQ----------IMSLAAALIPFIEHDDANRALMGSNMQRQAVPLIYSQKPIVGTGV--EPAAVLDSGFIIKAYSAGRVLNASSNSITIADINKQQIHYFLRKFQRSNQETSINQRPIVWPGEIVFSGQIIADGPSTNDGELALGKNLIVAYMPWEGYNYEDAIVINERLVFEDTLTSLHIEEYETCLGQSALGSEKLTSKLPFATMHAARHLDGSGIVKIGSYVYESDVLVGKLTPCEEDTSPEAKLLKALYGQKKQSYRDTSLCVSPGTEGRVVDIRIMSASSLNKNAQMPAAFSETIRIYIAHIRKIKVGDKLAGRHGNKGVISRILARQDMPHLPDGTPVDIILNPLGVPSRMNVGQIFECLLGLAGAKLGKRFKVTPFDEIFGEEASRVLINQKLKEAAIKTKENWIFNSYSPGKVMLQDGRTGEYFDNPITVGKSYILKLVHLVEEKIHARATGPYSMIAEQPLAGKSQR 1046          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A0D3ML31_9STRA (DNA-directed RNA polymerase n=1 Tax=Ochromonas sp. CCMP1393 TaxID=420556 RepID=A0A0D3ML31_9STRA)

HSP 1 Score: 692 bits (1786), Expect = 6.680e-215
Identity = 472/1166 (40.48%), Postives = 635/1166 (54.46%), Query Frame = 3

Query: 4890 MFIANTITKKALETIVHETFLSLGSVPSSLLLDSLKLLGFYYATNAGISINIEDLKTPHKKEALIELAVKEIKIISKDWEKGTISDAERFQSIIDSWTVATESLKTKILKHYKNFDPTNNLHIMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREVNCKSTTGIILLLNRKNNIQNIIGRFLISAKDKKSNTFIKEYKNTIITTSAAKKLRNLAPIVLNLRSPLSCSASGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQLLHLF---LENS*SQKQ*KR-----FVSNKPWAYCS*ITTDNKNINYKLVWFKKDIILDAGSFLYKLTSTFIKKG----------FNSG*NRKCVRIRNWTTKTYTYT*FRRG*I**SSFTANK*RK*I*N*DKSRRGRAVGCRR*NFSTAKRSRI*KPKNLKVKSLFAELKLCTPYEGIFNYLEPRILISGSITNISFNAVKILIL**TVALK*QFIRK---------TISM*INLPF*LR*IYTKCNRWTNLLYT*KKLFPNDYIFF-----NNGI*RLENLFRSIKK*YCYKTKQNFSC*KSKF**YFSKETWNIVKRDGLHYFFKK*A--LIS*AAALYCNRSKMILFTR*ATWVISYL**PNG--RYCSRFTE--NRRIN*GAYS*R*S*ASSTIWRFIRF*C*SNVFCNNRY-ERSTFWAIC*RG*CNARGSFCREECP*TKIC*RNLCT*YLFKKKLFYMVVVYGMRFRYPRILFLQ*YREK*I*FHKSRWLYFR-----NKH*R*ENKLNLVKYRYFRHRGETAQCFVLRKERSQQYNIR------------------------------FKNKSACDCIVELRNGKFIYLEPVEPITSYAIPLNARMLFEPGSFVDIGEPFTSGSIDPHELLNILFHYHCRLDGLLGGYLV*KIPINTNEFYFIHL*VTKC*NIKQTY*-NFGSPD--------DCKCSYQIRGDTPLFPGECVKFSLILEICQALNVAKDRKCSKVPKFEPIFLSATNTSLSKDGFLSAAGFQETKRILTKAAIEGKTDWLRGLKECALLGRLMPAGSSFLNYKGYLDNIYLFKD 8138
            M I  T+TKK LETIVHETF + GS+ SS LLDSLK LGFYYATNAGISINIEDLKTP+ K+  ++ A  E+  +S+ WE+G +SD ERFQ+IIDSW +ATESLK +I+ +Y+NFDP NNL+IMAFSGARGN+SQVRQL+GMRGLMSDQEGKIIDLPI+ NFREGLSSIDY+ISSYGARKGIVDTALKTADSGYLTRRLIY  QDL+IRE+NCK+  GII+LLN+  N +NI+GR L+ AK+ K+N+ + ++ N ++      +L+  +P+ LN+RSPL+C ++GSICQ+CYGWDLAQ+ LISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGI+TSE ++Q +  F   +E   S K          + +K     + I T+ K I       +++I LD GSFLY   S FIKKG          F  G  R      +   + +  +   R        +  +  K   N D      A G     F   K ++I     L  +  FA LK+ TPY+G+    E ++ +  +   ++ +   +  +      K   I K         TI M   LP     IY    + +  + T   +  ND         NN     +N  RS      +    +FS  KS F          ++K+DG    F+      +S    L   +   +L  +    +++Y        +   +  E    RI                +  +R      +F N+ + E   F  I        RG           +  +N  +    K+KL Y+      + +  +I+     +   + ++   W  +        H R   K +   Y +F  RG+     +  K+ S  +N +                              F N  + D I+++ + ++++LE + PI  Y +P ++++  +PG+FVDIGEP T G IDPHELL ILF YH  LDG+L G        + N+F    L V    +I Q+   N  S            K   +  GDTP  PGE ++ SLI EI +AL   K  K  K PKFEP+FLS TN+SLSKDGFLSAAGFQETKR+LT+AAIEG +DWLRGLKEC ++GRL+PAGS+FLNYK YLDNIYLFKD
Sbjct:    1 MLITRTVTKKILETIVHETFSNFGSLSSSSLLDSLKFLGFYYATNAGISINIEDLKTPNVKKEFLKTATDEMSFVSQQWEQGFVSDTERFQTIIDSWNIATESLKNRIIDYYQNFDPANNLYIMAFSGARGNMSQVRQLVGMRGLMSDQEGKIIDLPIQTNFREGLSSIDYIISSYGARKGIVDTALKTADSGYLTRRLIYIAQDLIIREINCKTKNGIIVLLNKNTNCKNILGRHLLDAKEIKTNSQLHKFNNLLLDEKVLNQLKQKSPLSLNIRSPLTCESNGSICQSCYGWDLAQNNLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIFTSELLQQTVAPFSGRIELPLSLKTVAYRTNHGIIVSKLQQEANIIITNWKGI-------REEIFLDIGSFLYIQKSGFIKKGELISEYSARSFIPGVRRLKPIYTSIAGEIHFESLLLRP------ISREEKPKVRVNQDDGILWLASGK---VFPIPKEAKIVDSSILLKRRSFASLKIVTPYDGMIKIEENKLFLLNNDQKLTIDISSLQKILRNCTSKFSVITKNYQYVDKYTTIGMLYILPNYEGRIYGIRKKESKDITTYFLITENDVWKIHSDQVNNFSILSDNKVRSGN---IFNETSSFS--KSGF----------LLKKDGFKMIFQNAVPIFLSRGTILNYKQGDFVLEKQLLATLVNYTQQTEDIVQGLPKIEELIEARI-----------PKMKSYLSLR----PGIFLNSSFLEVFKFSKI--------RGEVIDYYYDRLNLLDKNFTS----KEKLAYLKEYNKRKKQIVKIIHSISNKNDLVIYNDKIWKVYPLPPDFAPHYRTTGKPD---YSFFNSRGQMLLININNKKISAGWNQKEDLQSDIFLSKYNSNNKISKWKKVPKENFIFGNNKSQDLILQINDKEYLFLESINPIIEYKLPSSSKVSVKPGNFVDIGEPITDGIIDPHELLGILFQYHYLLDGILKGTFR-----SLNKFQL--LLVNSVQSIYQSQGVNISSKHIEIIVRQMTSKVVIKESGDTPFLPGEIIRLSLITEIYKALYSNKSLKIYKTPKFEPLFLSTTNSSLSKDGFLSAAGFQETKRVLTRAAIEGASDWLRGLKECVIIGRLIPAGSAFLNYKNYLDNIYLFKD 1098          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A3G2QZ15_9STRA (DNA-directed RNA polymerase n=1 Tax=Synura uvella TaxID=52557 RepID=A0A3G2QZ15_9STRA)

HSP 1 Score: 659 bits (1699), Expect = 1.160e-202
Identity = 467/1159 (40.29%), Postives = 638/1159 (55.05%), Query Frame = 3

Query: 4890 MFIANTITKKALETIVHETFLSLGSVPSSLLLDSLKLLGFYYATNAGISINIEDLKTPHKKEALIELAVKEIKIISKDWEKGTISDAERFQSIIDSWTVATESLKTKILKHYKNFDPTNNLHIMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREVNCKSTTGIILLLNRKNNIQNIIGRFLISAKDKKSNTFIKEYKNTIITTSAAKKLRNLAPIVLNLRSPLSCSASGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQLLHLFLENS*SQKQ*KRFVSNKPWAYCS*ITTDNKN---INYKLVWFKKDIILDAGSFLYKLTSTFIKKG----------FNSG*NRKCVRIRNWTTKTYTYT*FRRG*I**SSFTANK*RK*I*N*DKSRRGRAVGCRR*NFSTAKRSRI*KPKNLKVKSLFAELKLCTPYEGIFNYLEPRILISGSITNISFNA------VKILIL**TVALK*-QFIRK-TISM*INL-PF*LR*IYTKCNRWTNLLYT*KKLFPNDYIFFNNGI*RLENL-FRSIKK*YC-----YKTKQNFSC*KSKF**YFSKETWNIVKRDGLHYFFKK*ALIS*AAALYCNRSKMI----LFTR*ATWVISYL**PNGRYCSRFTENRRIN*GAYS*R*S*A--------SSTIWRFIRF*C*SN--VFC--NNRYERSTFWAIC*RG*CNARGSFCREECP*TKIC*RNLCT*YL------FKKKLFYMVVVYGMRFRYPRILFLQ*YREK*I*FHKSRWLYFRNKH*R*ENKL-----------------NLVKYRYFRHR----GETAQCFVLRKERSQQYNIRFKNKSACDCIVELRNGKFIYLEPVEPITSYAIPLNARMLFEPGSFVDIGEPFTSGSIDPHELLNILFHYHCRLDGLLGGYLV*KIPINTNEFYFIH----L*VTKC*NIKQTY*NFGSPD-DCKCSYQIRGDTPLFPGECVKFSLILEICQALNVAKDRKCSKVPKFEPIFLSATNTSLSKDGFLSAAGFQETKRILTKAAIEGKTDWLRGLKECALLGRLMPAGSSFLNYKGYLDNIYLFKD 8138
            M +  TITKK LETIVH+TF   G++ SS LLDSLKLLGFYYATNAGISINIEDLKTP  K+  ++ A KEI+ +S  W++G ISD ERFQSIID+W VATESLK +I+ +Y+NFDP NNL+IMAFSGARGN+SQVRQL+GMRGLMSDQEGKIIDLPI+ NFREGLSSIDY+ISSYGARKGIVDTALKTADSGYLTRRLIY  QDLVIRE++C++  G++ LL + ++I+NI+GR LIS K   SN  +   K  ++     K+L+  AP+ +N+RS L+C ++GSICQ CYGWDLAQS LISLGE+VGIIAAQSIGEPGTQLTMRTFHTGGI+T E  +Q+L  F          K         +         N   IN+K +  K +I LD GS+LY   ++F+K+G           N+G  R+   I         Y       I     T         N D        G     F   K  +   PK LK     A+LK+ +PYEG     +  + I  +   ++         +K   L  ++A+K  Q+I   TI   + + PF    +Y+   +    + T   +  +D    N+   ++ N  F   KK Y        T   FS  +S F  +  K+ + ++ ++ +  F  +  L++     +    K+     ++T+    ++  L  P         E RR    +Y                + +  F R     N  + C  N +   + F          +  S  +++    K       + YL      F KK+ Y  +     F+  +  + +  +EK I   K     F+NK    +N+                  N+   + FR +     + +    L  +   +Y I F+N+   D ++++ N  F++LE + P+  Y  P ++R+LF+PG+F+DIGEP T G ID HELLNI F+YH   DG+  G    +  +   +  F++    +  ++  NI   +          K   +  GDTPL PGE ++ SLI EIC AL  ++  K  K+PK+EPI LSATN+SLSKDGFLSAAGFQETKR+LTKAAIEG  DWLRGLKEC ++GRL+PAGS+FLNYK YLD+IYLFKD
Sbjct:    1 MLLTRTITKKLLETIVHQTFTEFGNLSSSSLLDSLKLLGFYYATNAGISINIEDLKTPDVKKNFLKEANKEIEFVSTQWQEGFISDTERFQSIIDTWNVATESLKNRIIDYYQNFDPANNLYIMAFSGARGNMSQVRQLVGMRGLMSDQEGKIIDLPIQTNFREGLSSIDYIISSYGARKGIVDTALKTADSGYLTRRLIYIAQDLVIRELDCQTKEGLVFLLKKTSDIKNIVGRTLISIKP--SNNLL--LKKKLLDEEFLKELKKSAPLTINVRSSLTCKSNGSICQKCYGWDLAQSKLISLGESVGIIAAQSIGEPGTQLTMRTFHTGGIFTGETHKQVLAPFSGKLIIPASLKTISYRTDRGFIVLKVKQESNLTLINWKNL--KTEIFLDIGSYLYISNTSFVKEGQLIAEYSTQSLNTG-RRRLKPIYTSLAGEIKYENIVVRKIDYEKRTLKI------NQDDGVLWITSGK---IFPLPKEIKYKFPKVLKKTKSLAKLKIMSPYEGFVQIEKDTLTIINNKKKLTLELGNLIKPIKNCFLKFSLAIKNYQYIDSYTILGFLEIYPFYEGIVYSVRKKDAKNMKTLFFITESDIWKINSD--QINNFSFFPNKKAYVRSGNLLNTTGKFS--RSGF--FLKKDGFQMIFQNAMPIFLTQGTLLNYKQGDFVFEKKIFATLRIYTQQTEDIVQGL--PK---IEELIEARRPKTKSYLANRPGVLLNKSITQETKLSNFTRTINNGNGIIKCIYNEKDNENEF---------KSASSIKKQKKKQEKDTISIGQSIYLKDDIIIFNKKI-YRAMPIPSNFQLVKN-YKENAKEKDIALKKE--FLFKNK----QNQTLLFYGKESFSYWVRDLPNIFMRKTFRPKLFKYNKNSLTLWLEIKSKSKYLI-FRNEKN-DYLIQINNASFLFLEYLNPLIEYEFPSSSRLLFQPGNFIDIGEPITQGIIDAHELLNIFFNYHLTFDGIRYGT---QRSLTKFQLIFVNSIQAIYQSQGVNISSKHIEIIVKQMTAKVVIKTSGDTPLLPGELIRTSLITEICSALKSSEFNK--KIPKYEPILLSATNSSLSKDGFLSAAGFQETKRVLTKAAIEGSCDWLRGLKECIIIGRLIPAGSAFLNYKNYLDSIYLFKD 1108          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A3G2R082_9STRA (DNA-directed RNA polymerase n=1 Tax=Neotessella volvocina TaxID=2419522 RepID=A0A3G2R082_9STRA)

HSP 1 Score: 619 bits (1596), Expect = 1.060e-188
Identity = 440/1142 (38.53%), Postives = 603/1142 (52.80%), Query Frame = 3

Query: 4890 MFIANTITKKALETIVHETFLSLGSVPSSLLLDSLKLLGFYYATNAGISINIEDLKTPHKKEALIELAVKEIKIISKDWEKGTISDAERFQSIIDSWTVATESLKTKILKHYKNFDPTNNLHIMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREVNCKSTTGIILLLNRKNNIQNIIGRFLISA-KDKKSNTFIKEYKN--TIITTSA--AKKLRNLAPIVLNLRSPLSCSASGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQLLHLFLENS*SQKQ*KRF-VSNKPWAYCS*ITTDNKNINYKLVWFKKDIILDAGSFLYKLTSTFIKKGFNSG*NRKCVRIRNWTTKTYTYT*FRRG*I**SSFTANK*----RK*I*N*DKSRRGRAVGCRR*NFSTAKRSRI*KPKNLKVKSLFAELKLCTPYEGIFNYLEPRILI--------SGSITNISFNAVKILIL**TVALK*QFIRK--TISM*INLPF*LR*IYTKCNRWTNLLYT*KKLFPNDYIFFNN----GI*RLENLFRSIKK*YCYKTKQNFSC*KSKF**YFSKETWNIVKRDGLHYFFKK*ALIS*AAALYCNRSK----MILFTR*ATWVISYL**PNGRYCSRFTENRRIN*GAY-----------S*R*S*ASSTIWRFIRF*C*SNVFCNNRYERSTFWAIC*RG*CNARGSFCREECP*TKIC*RNLCT*YLFKKKLFYMVVV-YGMRFRYPRI---LFLQ*YREK*I*FHK----SRWLYFRNKH*R*ENKLNLVKYRYFRHRGETAQCFVLRKERSQQYNIRFKNKSACDCIVELRNGKFIYLEPVEPITSYAIPLNARMLFEPGSFVDIGEPFTSGSIDPHELLNILFHYHCRLDGLLGGYLV*KIPINTNEFYFIHL*VTKC*NIKQTY*NFG------------SPDDCKCSYQIRGDTPLFPGECVKFSLILEICQALNVAKDRKCSKVPKFEPIFLSATNTSLSKDGFLSAAGFQETKRILTKAAIEGKTDWLRGLKECALLGRLMPAGSSFLNYKGYLDNIYLFKD 8138
            M I  T+TKK LETIVHETF   G + SS LLDSLKLLGFYYATNAGISINIEDL+TP  K+  IE+A KEI+ IS+ W++G +SD ERFQ+IID+W +ATESLK KI+ +Y+ FDP NNL+IMAFSGARGN+SQVRQL+GMRGLMSDQEGKIID+PI+ NFREGLSSIDY+ISSYGARKGIVDTALKTADSGYLTRRLIY  QDLVIRE +CK+  G++ + N+ + I+N+IGR LISA K + +   I +  N  +IIT +     + R   P++LN+RSPL+C ++GSICQ CYGWDLAQ+ L++LGEA+GIIAAQSIGEPGTQLTMRTFHTGGI+T E ++Q+   F          K            + +  ++K +       + DI L  G++LY   S+F+K+G           +   T K         G I   +    K     +K   N D S      G     FS  K      P  L     FA  K+ +PY G         +I        S S  +++      +I   +     Q I K   +      P     IY+   + T  + T   +  +D    NN     I  L++    ++          FS  +S F  +  K+ + ++ ++    F  +  +++     +  +++    +I +T+    ++  L  P         E R+    AY           S       + + R +       ++ + + +R            +  G F                  +L++  +F + ++  G +    +       + Y ++ + FH     S W+         + K N   + Y     E      L+          FK     D I++  N +F++LE + P++ Y IP +++ LF  G FVDIGEP T G ID HELLNI F+YH   DG L G     I  + ++F  I +      +I+  Y + G                 K   +  GDTPL PGE ++ S I EI +A          K PKFEP+ LSA+N SL+KDGFLS AGFQETKR+LTKAAIEG  DWLRGLKEC +LGRL+PAGS+FLNYK YLD +YLFK+
Sbjct:    1 MLITQTVTKKILETIVHETFTQFGILSSSSLLDSLKLLGFYYATNAGISINIEDLRTPEAKKKYIEIANKEIEHISEQWQQGFVSDIERFQNIIDNWNLATESLKNKIIDYYERFDPANNLYIMAFSGARGNMSQVRQLVGMRGLMSDQEGKIIDIPIQTNFREGLSSIDYIISSYGARKGIVDTALKTADSGYLTRRLIYIAQDLVIREQDCKTKQGVLFVFNKNSQIKNLIGRTLISARKIQSTEEVINQLPNDKSIITLNKDILNEFRFSTPLLLNVRSPLTCKSNGSICQKCYGWDLAQNKLVALGEAIGIIAAQSIGEPGTQLTMRTFHTGGIFTGETLKQIFAPFSGKILIPSSLKTISYRTNHGILVAKVQQESKVLLRNWEGKETDIFLSIGTYLYISNSSFVKEGQLIA-EYSIQSLSLGTRKLKPVYTMMEGEIRFENLLIRKITKDNKKIKVNQDDSVLWITSGK---IFSLPKEIDYLFPLILDKNRPFALQKIVSPYSGKIELFSQSFIIVLKNKKKYSLSFFDLTKKFPNCIIKFSSSIKTIQHIDKFTILGFLYFFPLCEGKIYSLKKKETKYIKTYFCITESDVWKINNEQVNNISFLQDNKNIVRPGNSISNSLKFS--RSGF--FLYKDGFKMIFQNATPIFLSRGTILNYKQGDFVFKNQIFATLINYTQQTEDIVQGL--PK---IEELIEARKPKLKAYLSNRPGIILNNSFSPETKLTNLIRIVDKNIIRCIYNDKKIKRDDKE--------DGLGMFLGHSIYVKPDF-------FLYRNSIFKISMIPSGFKLEKKKSKNEYVFKNYYDRPLIFHGKNQYSNWI---------KIKANEFLFPYVFRFTENGIEKWLKLNSKMSIFQNFKQ----DYIIQTSNNEFLFLEYLNPVSHYMIPFSSKYLFMSGMFVDIGEPITEGIIDAHELLNIFFNYHLIFDGRLKG-----IERSLSKFQLILVN-----SIQAIYQSQGVDISSKHIEIIVKQMTSKVVIKDSGDTPLLPGELIRLSFITEIYKAFQTIDS---FKKPKFEPVLLSASNCSLNKDGFLSPAGFQETKRVLTKAAIEGSVDWLRGLKECIILGRLIPAGSAFLNYKNYLDTVYLFKE 1088          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A3G2QYC8_9STRA (DNA-directed RNA polymerase n=1 Tax=Synura petersenii TaxID=52555 RepID=A0A3G2QYC8_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 2.930e-187
Identity = 450/1204 (37.38%), Postives = 608/1204 (50.50%), Query Frame = 3

Query: 4890 MFIANTITKKALETIVHETFLSLGSVPSSLLLDSLKLLGFYYATNAGISINIEDLKTPHKKEALIELAVKEIKIISKDWEKGTISDAERFQSIIDSWTVATESLKTKILKHYKNFDPTNNLHIMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREVNCKSTTGIILLLNRKNNIQNIIGRFLIS-----------------AKDKKSNTFIK-----EYKNTIITTSAAKKLRNLAPIVLNLRSPLSCSASGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQLLHLFLENS*SQKQ*KRF-VSNKPWAYCS*ITTDNKNINYKLVWFKKDIILDAGSFLYKLTSTFIKKG----------FNSG*NRKC---------VRIRNWTTKTYTYT*---FRRG*I**SSFTANK*RK*I*N*DKSRRGRAVGCRR*NFSTAKRSRI*KPKNLKVKSLFAELKLCTPYEGIFNYLEPRILISGSITNISFNAVKILIL**TVALK*QFIRKT---------------ISM*INLPF*LR*IYTKCNRWTNLLYT*KKLFP------NDYIFFNNGI*RLENLFRSIKK*YCYKTKQNFSC*KSKF**YFSKETWNIVKRDGLHYFFKK*ALIS*AAALYCNRSKM----ILFTR*ATWVI------------------SYL**PNGRYCSRFTENRRIN*GAYS*R*S*ASSTIWRFIRF*C*SNVFCNNRYERSTFWAIC*RG*CNARGSFCREECP*TKIC*RNLCT*YLFKKKLFYMVVVYGMRFRYPRILFLQ*YREK*I*FHKSRWLYFRNKH*R*ENKLNLVKYRYFRHRGETAQCFVLRKE-------RSQQYNIRF-----------------KNKSACDCIVELRNGKFIYLEPVEPITSYAIPLNARMLFEPGSFVDIGEPFTSGSIDPHELLNILFHYHCRLDGLLGGYLV*KIPINTNEFYFIHL*VTKC*NIKQTY*-NFGSPD--------DCKCSYQIRGDTPLFPGECVKFSLILEICQALNVAKDRKCSKVPKFEPIFLSATNTSLSKDGFLSAAGFQETKRILTKAAIEGKTDWLRGLKECALLGRLMPAGSSFLNYKGYLDNIYLFKD 8138
            M +  T+TKK LE IVHETF   G++ SS LLDSLKLLGFYYAT AGISINIEDLKTP  K+  ++ A KEI  +S  W++G ISD ERFQ+IID+W +ATE LK +I+ +Y+NFDP NNL+IMAFSGARGN+SQVRQL+GMRGLMSDQEGKIIDLPI+ NFREGLSSIDY+ISSYGARKGIVDTALKTADSGYLTRRLIY  QDLVIRE+NC +  GII LLN  +N +N+IGR L+S                 +K KK   F +     +  +  +     ++L   AP+ LN+RS L+C ++GSICQ CYGWDLAQ   ISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGI+T E  +Q+   F       K  K F            +  + K         KK+I L+ GS+LY  T++F+KKG          F+ G  R           V+  N   +         F    +        + R    N D      A G     FS     ++   KNL  +   A+LK+ +P +G     +    I G    + F    ++       +K  F+ +                 S    L + +R   +K  R T    T   +F       NDY  F N     + + RS    +  +T   FS  +S F  +  K+ + I+ +  +  F  +  +++     +   +KM    I +T+    ++                  ++L    G +  +   N +    + +        T+  F       N     + E+     I   G      SF +EE               +F+++++ ++ +       P IL         I F   +    + K  +   KL   K   F        C   +K+       ++Q +  ++                 K K   D I++     F +LE + P+  Y  PL + +LFE G F+D+GEP T G ID HELL++LF YH   DG+L G        + +   F  + V    +I Q+   N  S            K   +  GDTP  PGE ++ SL+ EIC      K RK  K+PK+EP+ +S T +SLSKDGFLSAAGFQETKR+LTKAA+EG  DWLRGLKEC +LGRL+PAGS+FLNYK YLD++Y FKD
Sbjct:    1 MLLTRTVTKKILEAIVHETFTQFGNLSSSSLLDSLKLLGFYYATTAGISINIEDLKTPDSKKEFLDNANKEIDFVSNQWQQGLISDTERFQTIIDTWNLATEGLKNRIIDYYQNFDPANNLYIMAFSGARGNMSQVRQLVGMRGLMSDQEGKIIDLPIQTNFREGLSSIDYIISSYGARKGIVDTALKTADSGYLTRRLIYVAQDLVIREINCSTKEGIIFLLNSNSNTKNLIGRTLLSIKSFLPIRSQNQTKFWFSKKKKKQEFFQTKILPKILDQTLNEELLQELIPFAPLTLNVRSSLTCKSNGSICQKCYGWDLAQGKKISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIFTGETNKQIFAPFSGKFLIPKTLKAFSYRTNHGVLVLKLQQETKFTILNWKGEKKEIFLNVGSYLYIATTSFVKKGQLIGEYSLQSFSRGIRRLKPIYTTIAGEVKFENLVVRKILREKKEEFPNEFVSEDEGWGIEERIIKVNQDDGVLWIASGK---IFSLPNEVKMLSLKNLFNQKALAKLKIISPSKGFIKIKKNSFFIFGQQKEVHFEFTSLIKSIKNCFIKFSFLVRNHQYIDEHTVIGSIEIFSCYEGLVYSIRYKDSKYMR-TFFFITESDIFKINSDQVNDYSLFQNK----KTIIRSGN--FLNETSI-FS--RSGF--FLKKDGFQIIYQHAIPIFLTRGTILNYNQGDFVLENKMFATLINYTQQTEDIVQGLPKIEELIEARKPKEKAFLAIKPGIFIKKCMGNEKRVANSRTIFNGIIKCTLQEFFPD---LNSKTKKQQEKENEKQIIYLG---QSLSF-KEEI-------------IVFQERIYKVIPIPS-----PFILTSDLTETGEIYFFTLKK---KGKKEKEMQKLLFYKKEKFSFWQPFEICLKTKKKDKFQTSFQNQLFQYKYGKLFPWGNGKKISIYENKKKEKEDLILQYNTTDFYFLEYLNPLKEYKFPLTSSLLFEIGKFIDLGEPITEGIIDAHELLDLLFQYHSTFDGILRG-------THRSLLKFQLVFVNSIQSIYQSQGVNISSKHIEIVVRQMTSKVKIKEPGDTPFLPGELIRLSLLNEICYIFKSTKFRK--KIPKYEPVLVSTTTSSLSKDGFLSAAGFQETKRVLTKAALEGSCDWLRGLKECIILGRLIPAGSAFLNYKNYLDSVYSFKD 1152          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A3G2QYQ5_9STRA (DNA-directed RNA polymerase n=1 Tax=Synura sphagnicola TaxID=52556 RepID=A0A3G2QYQ5_9STRA)

HSP 1 Score: 614 bits (1583), Expect = 1.640e-186
Identity = 444/1170 (37.95%), Postives = 618/1170 (52.82%), Query Frame = 3

Query: 4890 MFIANTITKKALETIVHETFLSLGSVPSSLLLDSLKLLGFYYATNAGISINIEDLKTPHKKEALIELAVKEIKIISKDWEKGTISDAERFQSIIDSWTVATESLKTKILKHYKNFDPTNNLHIMAFSGARGNISQVRQLIGMRGLMSDQEGKIIDLPIRANFREGLSSIDYMISSYGARKGIVDTALKTADSGYLTRRLIYTTQDLVIREVNCKSTTGIILLLNRKNNIQNIIGRFLISAKDKKSNTFIKEYKNTIITT---SAAKKLRNLAPIVLNLRSPLSCSASGSICQNCYGWDLAQSTLISLGEAVGIIAAQSIGEPGTQLTMRTFHTGGIYTSENVRQLLHLFLENS*SQKQ*KRFVSNKPWAYCS*ITTDNKNINYKLVWFK--KDII-LDAGSFLYKLTSTFIKKG----------FNSG*NRKC---------VRIRNWTTKTYTYT*FRRG*I**SSFTANK*RK*I*N*DKSRRGRAVGCRR*NFSTAKRSRI*KPKNLKVKSLFAELKLCTPYEGIFNYLEPRILISGSITNISFNAVKILIL**TVALK*QFIRKTISM*INLPF*LR*I-YTKCNRWTNLLYT*KKLFPNDY--IFF--NNGI*RLEN----LFRSIKK*YCYKTKQNFSC*KSKF**YFSKETWNIVKRDGLHYFFKK*ALIS*AAALYCNRSKMILFTR*ATWVISYL**PNGRYCSRFTENRRIN*GAYS*R*S*ASSTIWRFIRF*C*SNVFCNNRYERSTFWA-----IC*RG*CNARGSFCREECP*TKIC*RNLCT*YLFKKKLFYMVVVYGMRFRYPRILFLQ*YREK*I*FH-------------------------------------------KSRWLYFRN--KH*R*ENKLNLVKYRYFRHRGETAQCFVLRKERSQQYNIRFKNKSACDCIVELRNGKFIYLEPVEPITSYAIPLNARMLFEPGSFVDIGEPFTSGSIDPHELLNILFHYHCRLDGLLGGY---LV*KIPINTNEFYFIHL*VTKC*NIKQTY*NFGSPD-DCKCSYQIRGDTPLFPGECVKFSLILEICQALNVAKDRKCSKVPKFEPIFLSATNTSLSKDGFLSAAGFQETKRILTKAAIEGKTDWLRGLKECALLGRLMPAGSSFLNYKGYLDNIYLFK 8135
            M +  T+TKK LE +V ETFL  G++ SS LLDSLKLLGFYYAT AGISINIEDLKTP  K+  ++ A +E+ ++S  W++G ISD ERFQSI+++W VATE+LK +I+ +Y+NFDPTNNL+IMAFSGARGN+SQVRQL+GMRGLMSDQEGKIIDLPI+ NFREGLSSIDY+ISSYGARKGIVDTALKTADSGYLTRRLIY  QDLVIRE NC +  GI+ LLN+K++I+N++GR LIS +  +  +F+    + ++T    ++ KK  N   ++LN+RS L+C ++ SICQ CYGWDL+Q+ LI LGEA+GIIA QSIGEPGTQLTMRTFHTGGI+T E   Q+L  F       K  K   S         +    + ++ KL  +K  K+II L+ GS LY  ++ F+KKG           NSG  R           ++  N   +T +Y           +   N+    I        G+ +          K       K L  K  F +LKL TP+ G        I I  +      +   IL      ++K  F  +     ++    +  I +    + T  +Y+ +K   + +  +FF   + I RL +     F  ++    Y    NF    ++F       +   +K+DG ++ F+K      A  +Y  +  ++ + +   +V+        R  ++ TE+  I  G         +    +         +F +   E +TF          +G           E P      +      L K+K  + + ++     + + L L  Y +K   FH                                            S W+   N  KH    N   + K+  F+  G+      ++K ++   +  FKN+          +G F  LE V+P++ Y +  ++ +L++PG+FVDIGEP T G ID H+LLNILF YH  LDG+  G    L     + TN    I+   ++  NI   +          K   +  GDTP   GE ++FSL+ EIC+ L    +    K+PK+EPI L+ T  SLSKDGFLSAAGFQETKR+LTKAAIEG  DWLRGLKEC ++GRL+PAGS+FLNYK YLD+I+LFK
Sbjct:    1 MVLTRTLTKKNLENLVSETFLQFGNLSSSSLLDSLKLLGFYYATVAGISINIEDLKTPDVKKTFLKNANEEVNLVSLQWQQGLISDTERFQSIMNTWNVATEALKNRIIDYYQNFDPTNNLYIMAFSGARGNMSQVRQLVGMRGLMSDQEGKIIDLPIQTNFREGLSSIDYIISSYGARKGIVDTALKTADSGYLTRRLIYIAQDLVIREPNCGTKKGILFLLNQKSDIKNLLGRTLISIQSSQKFSFLINNSDLLLTEPFLNSLKKKEN--SVILNVRSSLTCDSNNSICQKCYGWDLSQNQLIGLGEAIGIIAGQSIGEPGTQLTMRTFHTGGIFTGEMSNQILAPFSGKLFLPKFLKTLYSRTNRGQL--VLKLQQELSLKLQNWKGLKEIISLNVGSSLYLSSTCFVKKGQLIAEASHHSLNSGKRRLKPIYTLLAGEIKYENIIVRTLSYNN--------RTLKINQENGVI----WITSGKVL-------IVPKEIEYQFQKTLNEKKAFGKLKLITPFSGFIQSSNNLIRIVNNTQIFELDLTSILPKVQNCSVKISFFFQNYQY-VDAHTIIGIIEFYPAEKGT--IYSIRKKVSSHFQVLFFILESDIWRLHSDEITNFSPLRTKPTYIRSGNFLNLTTQF-----SRSGFFLKKDGFNFVFQK------AIPIYLTQGTILNYKQ-GDFVLEKKIFATLRISTQQTED--IVQGLPKIEELIEARKPKKKACLALKPGIFLDFYPEENTFVKELNVIFTQKGIFKVGKEIDNSEKPFLSKTEKRNIQAKLAKRKRKHQICLFCQSIWFKKTLIL--YNQKP--FHLIPIPNIFKLSKKDNNKXXXXXXXXKYFIFDRRDDASIFGRKKPSSWIKVENVQKH---ANDFFIAKFFKFQE-GKVLPWLKIKKNKN---DFLFKNQXXXXXXXR-SDGSFFLLESVKPLSEYRMNSSSTILYKPGTFVDIGEPLTEGLIDAHDLLNILFKYHSFLDGMAKGTEKSLTKFQLLFTNSIQSIYQ--SQGVNIASKHVEIIVKQMTAKVLIKESGDTPFLAGELIRFSLVKEICKILEF--NDTTQKLPKYEPILLATTKASLSKDGFLSAAGFQETKRVLTKAAIEGSLDWLRGLKECIIIGRLIPAGSTFLNYKSYLDSIHLFK 1114          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A0D3MK66_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ochromonas sp. CCMP1393 TaxID=420556 RepID=A0A0D3MK66_9STRA)

HSP 1 Score: 544 bits (1401), Expect = 3.500e-161
Identity = 390/953 (40.92%), Postives = 510/953 (53.52%), Query Frame = 1

Query:    1 FLGELPLMTEEGTFIINGYERIVISQIIRSPGLYFRKELITPRKTIYTATLISDKGLWT------------------------------NLESKEKKEDLDQDKIFFTIYWIIIKYHQRNIRQYKASLLF----EAQQLTQESKKAANFYLKRKT*K**GTPSLSKKSVFNSQK*LLFYWKNWEI*NKQKTKFKLIFKYNQLNWPRFIRNCGWINRIKILRSS***HRPYKT*ANSTCW*AATKSIPN------------------RAV*ASKTFKN*SRNGKLV*SND---WVLDPRPLTAAMKKNFFKASQLSQFMDQVNPLSELTHRRKLAFLA*WVKTRPY*YYYTR--YSSQPIWKALPN*NTGGKVQG*CHLLQCLVVLALLGG*KHLILPLK-MNL*NLIEMLFLDPEQESKTSVAFADICLNK-KVQ*YHRLYQQKQLFFLVTKSNDVNFITTSPCK*CH*PQR*FHLLSMMMQIELLWVQICSGRQYPWFIHKSLLLVQVLNQPQF*IRAL**KHIAPRTRTRCVK*FNNGC*YKRAANPLFYASFSVLIKKLVLIKDQSFGQESTYFLDKLLQMGQAQMMESLH*V----KI*S--------------LRTCRGKDIIY--------EDAIVINERLVFEDTLTSLHIEEYEVCLGQIHTQSEKLTSKIPFATTHTTRHLDSSGVVKIGSYVNEGDILVGKLTPCEEDTSPEAKLLKALYGQKKQSYRDTSLCVSSGTEGRVVDIRVMSASLLNKSAQKPTAFSETIRIFIAHIRKIKVGDKLAGRHGNKGVISRILASQDMPNLPDGTPVDIILNPLGVPSRMNVGQIFECLLGLAGAKAGKRFKVTPFDEIFGGEASRVLINQKLKEAAIIANENWIFNSYSPGK*CYKMVEPG-IF**PNYSRKKLYIKACPFS*R*DSRSCDRPYSMIAEQPLAGKSQK 2601
            F GE+PLMTEEGTFIING ER++ISQIIRSPG+YFRKE  T RK IYTAT+IS+KGLWT                              ++ESKEKKE+ D DK+F    + +I+Y   N+++   SL +    + QQLT+E  K  N           G  +   K +F +Q+   F     EI  + K   KL      LN P+ I      + I I+         Y    +        K I +                    +      K+   N +L   +D   W++DPRP+T+A+K+ FFK SQLSQFMDQVNPLSELTH+R+++        R +     R  + SQ   +  P     G+  G    +     ++ LG  +     +K   + +  + +FL+PEQES+T +AFAD+ +NK K+     L  ++   F V K  DVNFITTSP +          ++S+   + + +++     +     +     V ++  PQ  I     +  A    +  +K ++ G      A+              +LIKD++  Q   Y+L K  +  Q   +     V    K+ S              L   R   I Y        EDAIVINER++F+D LTS+HIEE+E  L    + SEKLT  +P  T +  RHLD  G+VKIGSYV E DILVGKLTPCEEDTSPEAKLLKALYGQKK S+RDTSL V  GTEGRV+D+R++S +LL+K       F E IRI+IA +RKI+VGDKLAGRHGNKG+ISRIL  QDMP LPDGTP+DII NPLGVPSRMNVGQI ECLLGLAG K G RFKV+PFDEI+G EASRV +NQKLKEAA+  + +W+FN YSPGK   +    G  F  P    K   +K               PYSMI EQPLAGKSQK
Sbjct:  142 FFGEIPLMTEEGTFIINGCERVIISQIIRSPGVYFRKEFGTTRKVIYTATVISNKGLWTKFVLDEKTNRETKKVDRDRIYIKLNDFKIKSIESKEKKEESDDDKLFI---YDLIRYFGLNLQEVYDSLKYPLHLDNQQLTRE--KDTND----------GEIAFLIKQLFFNQRSGCF--SIGEI-GRYKINKKL-----SLNLPKHITYLTAQDFIGIIDGLI--ELKYYDRISDDIDHIKNKQIRSIGELLQNQIRIGFYRLQKSLLEGGTVSKSQKLNFELENYSDPENWIIDPRPVTSAIKE-FFKTSQLSQFMDQVNPLSELTHKRRISVFGPNGLKRDHISTVIRDIHPSQ-YGRLCPIETPEGQNAGLITSISMFGRISSLGWIETPYFLMKNAAIFSNKQPIFLNPEQESETKIAFADVSVNKNKMLTAEYLSVKENYSFSVKKKTDVNFITTSPLQ----------IISLATAL-IPFIEHDDANRALMGSNMQRQAVPLIY-PQKPIVGTGLEATAILDSSMVIKTYSEGIVLNSCAHS-------------ILIKDKN-DQNINYYLRKYYRSNQETSINQRPIVWSGEKVFSGQIIADGPSTNDGELSLGRNLTIAYMPWEGYNYEDAIVINERVIFDDCLTSIHIEEHETNLSYSVSGSEKLTKNLPHLTKYIRRHLDREGIVKIGSYVKEHDILVGKLTPCEEDTSPEAKLLKALYGQKKPSFRDTSLRVPHGTEGRVIDVRIISTNLLSKDEPSFPTFCEIIRIYIAQVRKIQVGDKLAGRHGNKGIISRILPRQDMPYLPDGTPIDIIFNPLGVPSRMNVGQILECLLGLAGQKLGNRFKVSPFDEIYGKEASRVFVNQKLKEAAVKTDASWLFNKYSPGKILLRDGRTGEYFDNPITVGKSYILKLIHLVEDKIHARATGPYSMITEQPLAGKSQK 1041          

BLAST of mRNA_P-littoralis_Contig1346.2.2 vs. uniprot
Match: A0A0D3MKC2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Ochromonas sp. CCMP1393 TaxID=420556 RepID=A0A0D3MKC2_9STRA)

HSP 1 Score: 524 bits (1349), Expect = 1.640e-160
Identity = 302/590 (51.19%), Postives = 382/590 (64.75%), Query Frame = 1

Query: 3253 INISCYASMVF--KGIPNYFTTILK-----LNYLKIRKIIYFKEN------------ILYPNQNQESFQQNNTFSSAKNELAPFLLKNKSLTWKRTLLFQQCEAEIWR---KKN*KVLKQ*KLY*EHLNLKTEIKKARSFIDANFLNDLKQEPVLIRSLLRRIRILESFLATGTNPSWMVLTTLPVLPPTLRPLVELENGHLVAADVNEIYRLIITPKSAASRFLYKYDAPDLITIQGKKLLQESVDSLIDNARLQKNKMFCLNNKPLKV*LKF*KENKGGFVNHC*EKE*ITRADL*LLLDHH*V*TRLAYRMKWQRSYFN-LLINELFKTRLGYAKFSAKQAQIIIKKNKPLVWSLLEKLAKKHCILLNRAPTLHRYGIQAFDPIIVLGKSIHLHPLVCSGFNADFDGDQMAIHLPLYESSQLEARSMMRPVHNILSSSNGEIILKPAQDVVIGCYYLTLMTKKNTFQLKKWFSNEIEALSAYYQKILSLHTPILVRYSISHAQAK--------------MADKQLF-----------NKCYFICNIGVIIGYLEKAKKND-AYIITDLLLETTPGRLIFNNNFKILV 4875
            I ++C  + ++  KG+PNY + +L+     L+  KI +I+YF+E               Y ++N ES           NEL   L  + +L+    L+  +  +   +   +K  K  +  K   E+LNL  +IKK RSFID+ FL DLK+  +  +S++RRIRILESFLAT TNPSWMVLTTLPVLPP LRPLVELE+G LVAADVNEIYRLIIT     S FLY++ APDLI+IQG+KLLQE VDSLIDNARL KNK FCLNNK LK   +  +  +G F      K         +++  +          +     F   LINEL KT++     + K A IIIKKNKP +W+LLE L +KHCILLNRAPTLHR+GIQAF+P+I+LG++IHLHPLVC+GFNADFDGDQMA+HLPLYESSQLEAR+MMRP +N+LS SNGE+ILKP QD+VIGCYYLTLM + N ++L+KWF NE EAL A+YQK LS+HTPILVRYS+     K              + +K++F            K Y I NIG++I +     KND  Y I DLLLETTPGRLIF+ NFK L+
Sbjct:  101 IELTCPVTHLWYLKGVPNYLSILLRCFDEDLSVSKIEQIVYFREGTREIESKHPLYRFFYQDKNSES-----------NELNKLLEHSSTLSITDDLILPETISPFLKTSLRKKRKGAEIIKAALENLNLPLQIKKTRSFIDSIFLADLKKTHLPDKSIIRRIRILESFLATKTNPSWMVLTTLPVLPPNLRPLVELESGRLVAADVNEIYRLIITRNQRLSDFLYRFVAPDLISIQGRKLLQEGVDSLIDNARLPKNKTFCLNNKALKSLTEILEGKQGRFRQSLLGKRVDYSGRSVIIVGPNLRLNECGLPYEMATELFQPFLINELLKTKIKPPSHNTKLAHIIIKKNKPFIWTLLEGLTRKHCILLNRAPTLHRFGIQAFNPVIILGQAIHLHPLVCTGFNADFDGDQMAVHLPLYESSQLEARTMMRPSYNVLSPSNGEVILKPTQDMVIGCYYLTLMIRNNRYKLQKWFGNETEALVAFYQKKLSIHTPILVRYSVLKFLVKIDQNELIFLNSEMFLKEKKVFLHKIFETGKRNKKYYLITNIGILIAHY----KNDLTYEINDLLLETTPGRLIFSINFKNLI 675