prot_P-littoralis_Contig1344.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1344.3.1
Unique Nameprot_P-littoralis_Contig1344.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length231
Homology
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BLAST of mRNA_P-littoralis_Contig1344.3.1 vs. uniprot
Match: A0A6H5LCY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY2_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 9.510e-40
Identity = 89/220 (40.45%), Postives = 126/220 (57.27%), Query Frame = 0 
Query:    1 MSQAAQNLVAETLEGYDDPDD-EDQAEENLAEAALTAAENFAEEHGLEIREASAGGGLWATQDLRMDERVPFFAQGHFSVMTPSELIDGAQEDGVARHVVCDSAVLRTLLSDGEVIASQDRTLLVIALDPSCFLYYMNSCQDSPDDQNLSRNSIFQTKLPTKDTAAGFLVDAEAGVAFTISREIKKGEQLMYVFPARKNATVTGVGSSGGGGEVALPARR 219
            MSQA+Q  +     GYD+ DD       NL  A  TAAE      GLEIR+A+ GGGLW  QD    E +P F QG + ++T  +L+   + DG  R+VVC + +L  L+ DG+  A     LLV+ LDPSCFLYYMN+C      +N+ R  +F TK P ++TA G L DAE G++F+++  +  G +L++ FP+R +     +G    GG  A P+ R
Sbjct:  788 MSQASQVDIENIRHGYDEDDDGSGPGGWNLEFAKRTAAE-----FGLEIRDATKGGGLWTIQD---QEIMPMFGQGQYELLTSDQLLAAVENDGKPRYVVCGTELLAALVVDGQYDAGSG-LLLVLRLDPSCFLYYMNACDAGDSKENIERRDLFGTKSPNQETAPGLLADAENGLSFSMTSPVTAGTELLHYFPSRASVKRARIGVEAEGGAGASPSGR 998
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1344.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LCY2_9PHAE9.510e-4040.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1344contigP-littoralis_Contig1344:6173..7208 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1344.3.1mRNA_P-littoralis_Contig1344.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1344 6094..7517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1344.3.1 ID=prot_P-littoralis_Contig1344.3.1|Name=mRNA_P-littoralis_Contig1344.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=231bp
MSQAAQNLVAETLEGYDDPDDEDQAEENLAEAALTAAENFAEEHGLEIRE
ASAGGGLWATQDLRMDERVPFFAQGHFSVMTPSELIDGAQEDGVARHVVC
DSAVLRTLLSDGEVIASQDRTLLVIALDPSCFLYYMNSCQDSPDDQNLSR
NSIFQTKLPTKDTAAGFLVDAEAGVAFTISREIKKGEQLMYVFPARKNAT
VTGVGSSGGGGEVALPARRNDRRTARVQAA*
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