prot_P-littoralis_Contig1342.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1342.4.1
Unique Nameprot_P-littoralis_Contig1342.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length635
Homology
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 871 bits (2251), Expect = 7.420e-305
Identity = 424/624 (67.95%), Postives = 505/624 (80.93%), Query Frame = 0
Query:   12 HLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP  GN +ER  R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG   RRL   PDRWKLAG  LPIV  YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+   A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++  P+KHR+WTW TGT RWMNRY HRLA    D+LP  +R+PGGW ++ P  LS  +T  VW REER++ S+TA  Y    F  N L++AR AGHA L EGLA IIRCR+GGFWGAGRLSRR ++HPRY  +CPCC    EE LAHVLFDC  W E R
Sbjct:  492 HMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEAR 1115          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 439 bits (1128), Expect = 3.630e-138
Identity = 258/642 (40.19%), Postives = 372/642 (57.94%), Query Frame = 0
Query:    7 RASAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASE--FADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            R  +P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+ G+ML F++ LY +S + V+TG+   + S+   ++RG+RQGCP SP+LFNIFINDI DG E LG  V G     +  +  RV G LFADD V +A + + L  +    ++W +++ M  G+ KCGVMA+G  +    L    DRW+L G  +P+V EY YLG + N  L +  ++G+++    R V A+   L  R IP+ +R +V++  ILP L +G EV+GM      +R+Q  +N+  R + GVGA A  V+   L REL I PI A AAA R RA  KA ++ T ++ +V  P + R  TW +GT RW++R+    A     EL  NVR P  WR L P + S+ +  AVW R E  S + T  W I S+  +  N L    T   A    GL  +I+ R   F  A RL+R   +  R+L  CP C     E++ H+L +C RW   R
Sbjct:  384 RPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASA-----ELAQNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRWEYHR 1018          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 393 bits (1010), Expect = 3.580e-118
Identity = 244/650 (37.54%), Postives = 350/650 (53.85%), Query Frame = 0
Query:    9 SAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAG-HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCME--TEEETLAHVLFDCSRWREGR 635
            S P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GVRG  L FI+ LY +S +S R             L+RG+RQGCP+SP+LFN+FINDI+D    LGV V G  + R T + GLLFADDLV ++   ++L Q  D +T W  + EM  G+ KC +M I +    LSS   D+W L G  +P+V EY YLG + +  LD++  +  ++    + + +++PFL CR IP+ +R  V   ++ P  L+GAE++G+R+  T  +      A + +AG           L REL IPP+ A AAARR RA  K  S+KTWV+T+   P + R+ TW TG   W+ R+       IPD  PD+          +P+  ++ +   +W R+     S    W+ +  F          A  H     G   +I+ R   F  A +LS    +   Y+TLCP C     + E++ H+L +C+ W + R
Sbjct:  667 SLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDS----------SPSQAATQICQWIWERDRAKDHSHAWDWFHSCHFEHTSSMLFNLASLHIQWTPGFNAMIQMRTRSFLTARKLSIIGKLPSLYMTLCPFCRNEHAQGESIPHLLVECAAWEKWR 1292          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: L7JRS9_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JRS9_TRAHO)

HSP 1 Score: 362 bits (930), Expect = 3.160e-112
Identity = 214/624 (34.29%), Postives = 335/624 (53.69%), Query Frame = 0
Query:   13 LASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTR-VSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            ++  D PI   E+   L  ++R KA G DG+P DF K A  D+  E P+++ L  +++  +    IP+ W ++ +V IPKKGD++  +NYRGISL++TV K+   I++ R++   E +N+  + QAGFR+ EECV QA  L+EI +RR+L+ + T+++F+D  KAYD VPH AL  K+   G+ G +LGF   LY + R SVR G+  SE F  + GV+QGCP SP+LFNI+IND+ +G       +SG  +E   + + GLLFADD V +A +   L     +L +W  + +M   I KCG M  G  T    S    W   G  +P   EY YLGL  +++L ++ M+ ++   G     A+   LR   I +P++V V + ++ P   +G E++GM      R+Q  ++ A + V G G S      A + ELDI P+   AA  RAR   K  + +T +  ++NT FK+R+ TW TGT RW+ + +        D   +N+       E T  ++   L     R ++   +     W + +     +L +A       L  G    ++ R G F    RL++   +  +Y T C CC + E+ET+ H+L+ C  W++ R
Sbjct:    5 ISDCDRPILWSEVRLTLKSVRRGKAPGVDGIPYDFYKCAQDDIELEHPLSRTLYLLIHRSFMTGKIPDRWNEAIIVPIPKKGDMSRTDNYRGISLINTVCKIATKIVAERISRICEANNILINEQAGFRRLEECVAQATSLVEILKRRELEGQTTYVVFIDFTKAYDRVPHGALLHKMKMLGLNGKLLGFTEALYRSPRASVRVGEDTSECFEYQIGVKQGCPASPILFNIYINDLFEG-------LSGIELEPGAKPIPGLLFADDAVILAESLAALESDVRKLEEWCNKWKMRVNIDKCGFMIFGDETVATIS----WM--GTEIPRANEYRYLGLPVDKELSLKRMIDDRRTKGLHAFGALRNLLRNPHIGIPIKVQVTKQILTPICTYGCELFGMSAQRVTRLQRIIDWAIKDVLGTGPS--FCRKAAYNELDIAPVELRAAKMRARGFTKWKNSRTTIGYLLNTAFKNRKATWMTGTSRWLKKTLK-------DNPSENI-------ECTINMVEQKLKERHIRNDKSKCKLIRETWKVGTVMKFKKLITANYQ----LTNGWRTFVKLRTGNFSSCTRLAKLGYIDNKYATECICCHKKEQETIFHLLWMCPMWKDER 595          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG)

HSP 1 Score: 355 bits (910), Expect = 4.300e-109
Identity = 210/619 (33.93%), Postives = 336/619 (54.28%), Query Frame = 0
Query:   17 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            D  IT  ++ +AL     +KA+G+D +P++F KL   +    + +AK    ++  +W    +PE +  S V+ IPKKGD  D NNY+GISLM +++K++  I S RL E   +HNL    QAGFR +EECV+QA  L E  +RRK++   T++ F+D  KA+D VPH+AL  KL    + G++   I  LY N +I +R G+  SET   + GVRQGCP SP+LF++FINDIL+  + + +P      E +  + GLLFADD V +A +   L    +++++W ++ EM     KCG + IG ST  +      + + G  +P V EY YLG++FN++ +    + N      + ++ M  FL  ++IP+ +R  ++R V+LP   +G E++GM +A  +++Q  ++ A RLV G G +AA++ +    EL I P+    A  R RA  K    +TW++ ++  P K +  TW +GT RW+ R+    +   P E    +      R+   T++S+      W     + R R     I  E      S           +G+  II+ R G +  A +L+R  ++   YL  CP C E + E++ H++F+CS+W   R
Sbjct:   84 DNTITWKDITKALKSTPNNKAAGKDRIPSEFWKLVEEESFPTTNLAKLFYKLIKNIWDSAYVPEIFNTSIVIPIPKKGDRRDPNNYKGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP------ELEGNIRGLLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITRIR--EELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRFCSENS---PGETLKALTLRT--RKKDSTMISN------WIESNNIGRVRN---IIGLEMLFPEHS-----------KGIMQIIKIRTGTYNFAYKLARSQVIGREYLMKCPFCNEIKPESVEHLIFECSKWTSER 663          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 360 bits (924), Expect = 2.600e-108
Identity = 218/619 (35.22%), Postives = 324/619 (52.34%), Query Frame = 0
Query:   17 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            D P++  E+  AL     +K+ G DG+P++  K+   +    SP+AK +L ++  +W  + IP++   S V+ IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR GD  S+T     GVRQGCP SP+LF+I+IND+LDG + + +P     +E    + GLLFADD V +A +   L    ++LT W Q+ EM     KCG+M I  ST  L      + + G  +  V+EY YLG+VFN K +    + N      +   +M  FL  + +P  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+S   L  E+ I  I   A+  R R   K ++ KTW+  ++N PFK+R  TW +GT RW  R++                  G     T   L +        R+ R   S+   W I +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R
Sbjct:  390 DTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNNTTAQALRA--------RKIRNDHSKITQWVIKNNLGLTSNWMGLELAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQR 969          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 355 bits (911), Expect = 3.810e-108
Identity = 215/627 (34.29%), Postives = 331/627 (52.79%), Query Frame = 0
Query:    9 SAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            +A  L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG  G +L F+ +LY N + SVR GD  S+TF  + GV+QGCP SP LFN++IN+IL+G   +G+   GN  +    V GLLFADD V  A + + +    + L  W  + +M   I KCG+M    + +R        K   AN+P V  Y YLG+  NR LD++ ++ ++     + +  + P +   +IP+P+RV +++ V++P   FG+E+YGM    T  +Q  ++KA R      A+     +  + E+ I  I   AA  R RA  K  + +T ++ ++ T FK  + TW TGT RW+ R +        D L  N  Q G  +      +   LTT  + R +   R +       S  ++ +     T  +  +  G   + + R G F    RL++   +   Y   C  C +   E   H+L+ CS+W + R
Sbjct:  200 AAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKN------DTL--NSTQEGVKK------VEDALTTGKYARSKSKIREKRRKLVFGSSISNWK----ETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKER 793          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 359 bits (922), Expect = 5.710e-108
Identity = 220/619 (35.54%), Postives = 325/619 (52.50%), Query Frame = 0
Query:   17 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            D P++  E+  AL     +K+ G DG+P++  KL   +    SP AK LL ++N +W  + IP++   S VV IPKKGD+ + NNYRGISL+ T+ KV+  IIS RL +   ++N+ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+RG +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+L G +  GV + G + E    ++GLLFADD V +A +   L    ++L+ W  + EM     KCG+M I  ST  L      + + G ++  V EY YLG+VFN K +    + +    G +   +M  FL  + IP  MRVA++R V++P L +G E++GM    +  +Q   + A RLVAGVG S A+    L  EL I  I    +  R R   K +S KTW++ ++  PFK+R  TW +GT RW  R++                  G   + T   L +        R+ R   S+   W   +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E +T+ H+L  C +W   R
Sbjct:  452 DTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLK-----------------GAENKTTAQALRA--------RKIRNDHSKITEWVTRNNLGLTSNWMGLELAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQR 1031          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG)

HSP 1 Score: 350 bits (897), Expect = 9.220e-105
Identity = 207/619 (33.44%), Postives = 327/619 (52.83%), Query Frame = 0
Query:   17 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            D  I   ++ +AL     +KA G DG+P++  K    +    S +AK L  ++  +W    IPE+   S VV IPKKGD+ D NNYRGISL+ T++K++  + +++L+    ++N+    QAGFR +EECV QA  L EI +RRK++   T++ F+D  KAYD VPH+AL  KL   G+ G++   I  LY + +I VR G   S       GVRQGCP SP+LF+++IND+ +  + + VP  G       ++ GLLFADD V  A +  +L    +++++W ++ EM     KCGVM IG  T  L      + + G  +P V  Y YLG++FN K +   ++ N      R ++ M  FL  + IP+ +R  ++R V++P   +G E++GM KA T ++Q  ++ A RLV G G + A+    L  EL +  +    A  R RA  K  ++KTW+  ++  P K R  TW +GT RW  R+    A   P E    + +         T  + +   + W +   + R R     +   F +N             ++G+  II+ R G F  A +L++  ++  +YL LCP C     E++ H++ +CS+W + R
Sbjct:  347 DLEIEWEDIKKALNNTPSNKAPGVDGIPSEVWKTVQDEEIPTSNLAKLLYKVVKRIWNMAYIPEKLNTSIVVPIPKKGDLRDPNNYRGISLIPTLVKIVAKVAASKLSFLDLKYNILVKEQAGFRSREECVAQATVLYEIVRRRKIKGLPTWIGFIDFAKAYDRVPHQALLQKLKIQGIGGHLHKVISALYKSPKICVRFGSYLSPVVEYNCGVRQGCPASPILFDLYINDLFENIKGITVPEIGE------KIKGLLFADDAVVFADSPAKLQIAFEKVSQWAKKWEMQVNASKCGVMGIGSQTNML------FTIQGGAVPQVEHYKYLGVMFNDKWNHRSVINNNSENSRRAMNGMYFFLGNKNIPIALRATLIRSVLIPIATYGGELFGMSKARTSKLQTVIDTASRLVIGSGKTIALHR--LREELKLTTVYTKTAVARERAFYKWPTLKTWITDLIEYPMKSRLDTWVSGTRRWTKRFCDHSA---PGETLKYLDRR--------TRANEYSVISNWLKSSGIGRIRNVTG-LELIFPEN-------------SKGIQEIIKIRTGLFRTAMKLAKSKIIDRKYLQLCPFCKNNVPESVEHLILECSKWTQQR 926          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 353 bits (906), Expect = 3.110e-104
Identity = 213/619 (34.41%), Postives = 323/619 (52.18%), Query Frame = 0
Query:   17 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 635
            D P++  E+ +AL     +K+ G DG+P++  KL   ++   SP+AK +  I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+   +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A +   L    ++++ W Q+ EM     KCG+M I  STR L      + + G  +  V  Y YLG+VFN K +    + N    G + + +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  I    +  R R  +K  ++KTW++ +++ PFK+R  TW +GT RW  R++                  G   + T   L +        R+ R   S+   W I +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R
Sbjct:  628 DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNKTTAQALRA--------RKIRNDHSKITEWVIRNNLGLKSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQR 1207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE7.420e-30567.95Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO3.630e-13840.19Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A3M2C3P5_9GAMM3.580e-11837.54Reverse transcriptase domain-containing protein n=... [more]
L7JRS9_TRAHO3.160e-11234.29RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1X253_9FUNG4.300e-10933.93RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1Y7R2_9FUNG2.600e-10835.22Putative RNA-directed DNA polymerase from transpos... [more]
L7JX89_TRAHO3.810e-10834.29RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1YAQ4_9FUNG5.710e-10835.54RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R0GP03_9FUNG9.220e-10533.44RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1X7T5_9FUNG3.110e-10434.41RNA-directed DNA polymerase from mobile element jo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 90..349
e-value: 8.5E-43
score: 146.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 71..351
score: 19.822083
NoneNo IPR availablePANTHERPTHR47027:SF11SUBFAMILY NOT NAMEDcoord: 18..461
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 18..461
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 84..351
e-value: 4.79307E-54
score: 182.106
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 18..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1342contigP-littoralis_Contig1342:28537..30441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1342.4.1mRNA_P-littoralis_Contig1342.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1342 28232..30441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1342.4.1 ID=prot_P-littoralis_Contig1342.4.1|Name=mRNA_P-littoralis_Contig1342.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=635bp
MGEMDRRASAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKL
AAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMN
NYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQA
ACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNML
GFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILD
GTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWL
QENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLV
FNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPR
LLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIP
PICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRY
IHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRT
AAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRD
LVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR043502DNA/RNA_pol_sf