mRNA_P-littoralis_Contig1342.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1342.4.1
Unique NamemRNA_P-littoralis_Contig1342.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 871 bits (2250), Expect = 4.780e-303
Identity = 424/624 (67.95%), Postives = 505/624 (80.93%), Query Frame = 3
Query:  339 HLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP  GN +ER  R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG   RRL   PDRWKLAG  LPIV  YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+   A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++  P+KHR+WTW TGT RWMNRY HRLA    D+LP  +R+PGGW ++ P  LS  +T  VW REER++ S+TA  Y    F  N L++AR AGHA L EGLA IIRCR+GGFWGAGRLSRR ++HPRY  +CPCC    EE LAHVLFDC  W E R
Sbjct:  492 HMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEAR 1115          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 438 bits (1126), Expect = 1.640e-136
Identity = 258/642 (40.19%), Postives = 372/642 (57.94%), Query Frame = 3
Query:  324 RASAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASE--FADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            R  +P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+ G+ML F++ LY +S + V+TG+   + S+   ++RG+RQGCP SP+LFNIFINDI DG E LG  V G     +  +  RV G LFADD V +A + + L  +    ++W +++ M  G+ KCGVMA+G  +    L    DRW+L G  +P+V EY YLG + N  L +  ++G+++    R V A+   L  R IP+ +R +V++  ILP L +G EV+GM      +R+Q  +N+  R + GVGA A  V+   L REL I PI A AAA R RA  KA ++ T ++ +V  P + R  TW +GT RW++R+    A     EL  NVR P  WR L P + S+ +  AVW R E  S + T  W I S+  +  N L    T   A    GL  +I+ R   F  A RL+R   +  R+L  CP C     E++ H+L +C RW   R
Sbjct:  384 RPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASA-----ELAQNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRWEYHR 1018          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 392 bits (1008), Expect = 1.340e-116
Identity = 244/650 (37.54%), Postives = 350/650 (53.85%), Query Frame = 3
Query:  330 SAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAG-HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCME--TEEETLAHVLFDCSRWREGR 2210
            S P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GVRG  L FI+ LY +S +S R             L+RG+RQGCP+SP+LFN+FINDI+D    LGV V G  + R T + GLLFADDLV ++   ++L Q  D +T W  + EM  G+ KC +M I +    LSS   D+W L G  +P+V EY YLG + +  LD++  +  ++    + + +++PFL CR IP+ +R  V   ++ P  L+GAE++G+R+  T  +      A + +AG           L REL IPP+ A AAARR RA  K  S+KTWV+T+   P + R+ TW TG   W+ R+       IPD  PD+          +P+  ++ +   +W R+     S    W+ +  F          A  H     G   +I+ R   F  A +LS    +   Y+TLCP C     + E++ H+L +C+ W + R
Sbjct:  667 SLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDS----------SPSQAATQICQWIWERDRAKDHSHAWDWFHSCHFEHTSSMLFNLASLHIQWTPGFNAMIQMRTRSFLTARKLSIIGKLPSLYMTLCPFCRNEHAQGESIPHLLVECAAWEKWR 1292          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: L7JRS9_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JRS9_TRAHO)

HSP 1 Score: 362 bits (929), Expect = 7.610e-111
Identity = 214/624 (34.29%), Postives = 335/624 (53.69%), Query Frame = 3
Query:  342 LASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTR-VSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            ++  D PI   E+   L  ++R KA G DG+P DF K A  D+  E P+++ L  +++  +    IP+ W ++ +V IPKKGD++  +NYRGISL++TV K+   I++ R++   E +N+  + QAGFR+ EECV QA  L+EI +RR+L+ + T+++F+D  KAYD VPH AL  K+   G+ G +LGF   LY + R SVR G+  SE F  + GV+QGCP SP+LFNI+IND+ +G       +SG  +E   + + GLLFADD V +A +   L     +L +W  + +M   I KCG M  G  T    S    W   G  +P   EY YLGL  +++L ++ M+ ++   G     A+   LR   I +P++V V + ++ P   +G E++GM      R+Q  ++ A + V G G S      A + ELDI P+   AA  RAR   K  + +T +  ++NT FK+R+ TW TGT RW+ + +        D   +N+       E T  ++   L     R ++   +     W + +     +L +A       L  G    ++ R G F    RL++   +  +Y T C CC + E+ET+ H+L+ C  W++ R
Sbjct:    5 ISDCDRPILWSEVRLTLKSVRRGKAPGVDGIPYDFYKCAQDDIELEHPLSRTLYLLIHRSFMTGKIPDRWNEAIIVPIPKKGDMSRTDNYRGISLINTVCKIATKIVAERISRICEANNILINEQAGFRRLEECVAQATSLVEILKRRELEGQTTYVVFIDFTKAYDRVPHGALLHKMKMLGLNGKLLGFTEALYRSPRASVRVGEDTSECFEYQIGVKQGCPASPILFNIYINDLFEG-------LSGIELEPGAKPIPGLLFADDAVILAESLAALESDVRKLEEWCNKWKMRVNIDKCGFMIFGDETVATIS----WM--GTEIPRANEYRYLGLPVDKELSLKRMIDDRRTKGLHAFGALRNLLRNPHIGIPIKVQVTKQILTPICTYGCELFGMSAQRVTRLQRIIDWAIKDVLGTGPS--FCRKAAYNELDIAPVELRAAKMRARGFTKWKNSRTTIGYLLNTAFKNRKATWMTGTSRWLKKTLK-------DNPSENI-------ECTINMVEQKLKERHIRNDKSKCKLIRETWKVGTVMKFKKLITANYQ----LTNGWRTFVKLRTGNFSSCTRLAKLGYIDNKYATECICCHKKEQETIFHLLWMCPMWKDER 595          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG)

HSP 1 Score: 354 bits (909), Expect = 1.000e-107
Identity = 210/619 (33.93%), Postives = 336/619 (54.28%), Query Frame = 3
Query:  354 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            D  IT  ++ +AL     +KA+G+D +P++F KL   +    + +AK    ++  +W    +PE +  S V+ IPKKGD  D NNY+GISLM +++K++  I S RL E   +HNL    QAGFR +EECV+QA  L E  +RRK++   T++ F+D  KA+D VPH+AL  KL    + G++   I  LY N +I +R G+  SET   + GVRQGCP SP+LF++FINDIL+  + + +P      E +  + GLLFADD V +A +   L    +++++W ++ EM     KCG + IG ST  +      + + G  +P V EY YLG++FN++ +    + N      + ++ M  FL  ++IP+ +R  ++R V+LP   +G E++GM +A  +++Q  ++ A RLV G G +AA++ +    EL I P+    A  R RA  K    +TW++ ++  P K +  TW +GT RW+ R+    +   P E    +      R+   T++S+      W     + R R     I  E      S           +G+  II+ R G +  A +L+R  ++   YL  CP C E + E++ H++F+CS+W   R
Sbjct:   84 DNTITWKDITKALKSTPNNKAAGKDRIPSEFWKLVEEESFPTTNLAKLFYKLIKNIWDSAYVPEIFNTSIVIPIPKKGDRRDPNNYKGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP------ELEGNIRGLLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITRIR--EELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRFCSENS---PGETLKALTLRT--RKKDSTMISN------WIESNNIGRVRN---IIGLEMLFPEHS-----------KGIMQIIKIRTGTYNFAYKLARSQVIGREYLMKCPFCNEIKPESVEHLIFECSKWTSER 663          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 360 bits (923), Expect = 6.160e-107
Identity = 218/619 (35.22%), Postives = 324/619 (52.34%), Query Frame = 3
Query:  354 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            D P++  E+  AL     +K+ G DG+P++  K+   +    SP+AK +L ++  +W  + IP++   S V+ IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR GD  S+T     GVRQGCP SP+LF+I+IND+LDG + + +P     +E    + GLLFADD V +A +   L    ++LT W Q+ EM     KCG+M I  ST  L      + + G  +  V+EY YLG+VFN K +    + N      +   +M  FL  + +P  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+S   L  E+ I  I   A+  R R   K ++ KTW+  ++N PFK+R  TW +GT RW  R++                  G     T   L +        R+ R   S+   W I +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R
Sbjct:  390 DTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNNTTAQALRA--------RKIRNDHSKITQWVIKNNLGLTSNWMGLELAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQR 969          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 354 bits (909), Expect = 1.240e-106
Identity = 215/627 (34.29%), Postives = 331/627 (52.79%), Query Frame = 3
Query:  330 SAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            +A  L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG  G +L F+ +LY N + SVR GD  S+TF  + GV+QGCP SP LFN++IN+IL+G   +G+   GN  +    V GLLFADD V  A + + +    + L  W  + +M   I KCG+M    + +R        K   AN+P V  Y YLG+  NR LD++ ++ ++     + +  + P +   +IP+P+RV +++ V++P   FG+E+YGM    T  +Q  ++KA R      A+     +  + E+ I  I   AA  R RA  K  + +T ++ ++ T FK  + TW TGT RW+ R +        D L  N  Q G  +      +   LTT  + R +   R +       S  ++ +     T  +  +  G   + + R G F    RL++   +   Y   C  C +   E   H+L+ CS+W + R
Sbjct:  200 AAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKN------DTL--NSTQEGVKK------VEDALTTGKYARSKSKIREKRRKLVFGSSISNWK----ETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKER 793          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 359 bits (921), Expect = 1.350e-106
Identity = 220/619 (35.54%), Postives = 325/619 (52.50%), Query Frame = 3
Query:  354 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            D P++  E+  AL     +K+ G DG+P++  KL   +    SP AK LL ++N +W  + IP++   S VV IPKKGD+ + NNYRGISL+ T+ KV+  IIS RL +   ++N+ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+RG +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+L G +  GV + G + E    ++GLLFADD V +A +   L    ++L+ W  + EM     KCG+M I  ST  L      + + G ++  V EY YLG+VFN K +    + +    G +   +M  FL  + IP  MRVA++R V++P L +G E++GM    +  +Q   + A RLVAGVG S A+    L  EL I  I    +  R R   K +S KTW++ ++  PFK+R  TW +GT RW  R++                  G   + T   L +        R+ R   S+   W   +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E +T+ H+L  C +W   R
Sbjct:  452 DTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLK-----------------GAENKTTAQALRA--------RKIRNDHSKITEWVTRNNLGLTSNWMGLELAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQR 1031          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG)

HSP 1 Score: 350 bits (898), Expect = 1.070e-103
Identity = 226/729 (31.00%), Postives = 365/729 (50.07%), Query Frame = 3
Query:   72 ESAPNSERADAY*SESVLEILLGCR------------WVETQGYRQRTPTGETPGYRCADDRRCRH*RVLENPLRATCFRRYRE*QVPRPMGEMDRRASAPHLASL----DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            E A  S RAD Y ++ + E+   C+            W++ Q  R  T   + P Y    +++      L++ + A+ F    +         +      P++       D  I   ++ +AL     +KA G DG+P++  K    +    S +AK L  ++  +W    IPE+   S VV IPKKGD+ D NNYRGISL+ T++K++  + +++L+    ++N+    QAGFR +EECV QA  L EI +RRK++   T++ F+D  KAYD VPH+AL  KL   G+ G++   I  LY + +I VR G   S       GVRQGCP SP+LF+++IND+ +  + + VP  G       ++ GLLFADD V  A +  +L    +++++W ++ EM     KCGVM IG  T  L      + + G  +P V  Y YLG++FN K +   ++ N      R ++ M  FL  + IP+ +R  ++R V++P   +G E++GM KA T ++Q  ++ A RLV G G + A+    L  EL +  +    A  R RA  K  ++KTW+  ++  P K R  TW +GT RW  R+    A   P E    + +         T  + +   + W +   + R R     +   F +N             ++G+  II+ R G F  A +L++  ++  +YL LCP C     E++ H++ +CS+W + R
Sbjct:  240 ERALKSRRAD-YKNKKLKEVQTACKMQTDNSPRQLWKWLKFQSKRYNTSLTDGPVY--DKEKKLVTDSSLKSEVWASHFEELAKDTSGNSRNHIKWVNMMPNIKGYYQECDLEIEWEDIKKALNNTPSNKAPGVDGIPSEVWKTVQDEEIPTSNLAKLLYKVVKRIWNMAYIPEKLNTSIVVPIPKKGDLRDPNNYRGISLIPTLVKIVAKVAASKLSFLDLKYNILVKEQAGFRSREECVAQATVLYEIVRRRKIKGLPTWIGFIDFAKAYDRVPHQALLQKLKIQGIGGHLHKVISALYKSPKICVRFGSYLSPVVEYNCGVRQGCPASPILFDLYINDLFENIKGITVPEIGE------KIKGLLFADDAVVFADSPAKLQIAFEKVSQWAKKWEMQVNASKCGVMGIGSQTNML------FTIQGGAVPQVEHYKYLGVMFNDKWNHRSVINNNSENSRRAMNGMYFFLGNKNIPIALRATLIRSVLIPIATYGGELFGMSKARTSKLQTVIDTASRLVIGSGKTIALHR--LREELKLTTVYTKTAVARERAFYKWPTLKTWITDLIEYPMKSRLDTWVSGTRRWTKRFCDHSA---PGETLKYLDRR--------TRANEYSVISNWLKSSGIGRIRNVTG-LELIFPEN-------------SKGIQEIIKIRTGLFRTAMKLAKSKIIDRKYLQLCPFCKNNVPESVEHLILECSKWTQQR 926          
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 353 bits (905), Expect = 7.090e-103
Identity = 213/619 (34.41%), Postives = 323/619 (52.18%), Query Frame = 3
Query:  354 DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRTAAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 2210
            D P++  E+ +AL     +K+ G DG+P++  KL   ++   SP+AK +  I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+   +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A +   L    ++++ W Q+ EM     KCG+M I  STR L      + + G  +  V  Y YLG+VFN K +    + N    G + + +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  I    +  R R  +K  ++KTW++ +++ PFK+R  TW +GT RW  R++                  G   + T   L +        R+ R   S+   W I +              +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R
Sbjct:  628 DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLK-----------------GAGNKTTAQALRA--------RKIRNDHSKITEWVIRNNLGLKSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQR 1207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1342.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE4.780e-30367.95Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO1.640e-13640.19Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A3M2C3P5_9GAMM1.340e-11637.54Reverse transcriptase domain-containing protein n=... [more]
L7JRS9_TRAHO7.610e-11134.29RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1X253_9FUNG1.000e-10733.93RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1Y7R2_9FUNG6.160e-10735.22Putative RNA-directed DNA polymerase from transpos... [more]
L7JX89_TRAHO1.240e-10634.29RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1YAQ4_9FUNG1.350e-10635.54RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R0GP03_9FUNG1.070e-10331.00RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1X7T5_9FUNG7.090e-10334.41RNA-directed DNA polymerase from mobile element jo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1342contigP-littoralis_Contig1342:28232..30441 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog45157.CMT010CT
PFAMsDUF4283,Exo_endo_phos_2,RVT_1
Model size2210
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.68e-73
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size1905
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789618.8382447-UTR-P-littoralis_Contig1342:28231..285361680789618.8382447-UTR-P-littoralis_Contig1342:28231..28536Pylaiella littoralis U1_48UTRP-littoralis_Contig1342 28232..28536 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789618.8497872-CDS-P-littoralis_Contig1342:28536..304411680789618.8497872-CDS-P-littoralis_Contig1342:28536..30441Pylaiella littoralis U1_48CDSP-littoralis_Contig1342 28537..30441 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1342.4.1prot_P-littoralis_Contig1342.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1342 28537..30441 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1342.4.1

>prot_P-littoralis_Contig1342.4.1 ID=prot_P-littoralis_Contig1342.4.1|Name=mRNA_P-littoralis_Contig1342.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=635bp
MGEMDRRASAPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKL
AAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMN
NYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQA
ACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNML
GFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILD
GTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWL
QENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLV
FNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPR
LLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIP
PICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRY
IHRLASWIPDELPDNVRQPGGWRELTPTILSSHLTTAVWRREERLSRSRT
AAWYIASEFADNRLSSARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRD
LVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR
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mRNA from alignment at P-littoralis_Contig1342:28232..30441+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1342.4.1 ID=mRNA_P-littoralis_Contig1342.4.1|Name=mRNA_P-littoralis_Contig1342.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2210bp|location=Sequence derived from alignment at P-littoralis_Contig1342:28232..30441+ (Pylaiella littoralis U1_48)
TGGGCAGCATACGAGGAGACTAAGAAGACCGCCGAACGACTGGTTCGACA GGACCGCCGCAAAACATGGACGAAAGCGCTCCAAACAGCGAGCGCGCAGA TGCGTACTGATCCGAAAGCGTTCTGGAAATTCTCCTCGGATGTCGCTGGG TGGAAACGCAAGGATACAGGCAGCGGACTCCAACCGGTGAAACACCCGGA TACAGGTGTGCTGATGACCGGCGCTGCCGACATTAGCGCGTCCTGGAAAA CCCACTACGAGCGACTTGCTTCCGACGTTACAGGGAATAGCAGGTCCCCC GACCAATGGGTGAAATGGACCGCCGCGCCTCAGCGCCCCACCTAGCATCG TTGGATGAACCAATAACGATGCCCGAATTGAATGAAGCCCTCCTCCGACT TAAGAGACACAAGGCTTCCGGCCGGGACGGATTACCAGCAGATTTTCTGA AACTCGCGGCAGGTGACGTGGGAACCGAGTCACCCATGGCCAAGGCCCTC CTAGGGATACTCAACCTAATGTGGAAATACCAGATTATCCCCGAGGAGTG GCAGGACTCCACGGTGGTCTCGATCCCCAAGAAAGGAGATGTCGCCGACA TGAACAACTACCGAGGGATCTCGCTCATGAGCACCGTCCTTAAGGTACTT GTGATGATTATCAGCACGCGCCTCAACGAGACCTTTGAAGAACACAACCT GTTCTCGCACGCACAAGCAGGATTTAGGAAGAAAGAGGAATGTGTGACCC AGGCCGCATGCCTCCTCGAGATCGCGCAACGACGCAAGCTCCAACGCAAG GCGACATTTCTCATGTTCGTCGATCTCAAGAAGGCCTACGACACGGTGCC GCACGAAGCGTTATTCGCCAAACTCGATTTTTACGGTGTGCGCGGGAACA TGTTGGGTTTTATCCGCAAGCTGTATGCGAACAGCCGTATCTCTGTCCGG ACCGGAGACCTTTTCTCGGAGACTTTTGGCCTGAAACGCGGGGTGAGACA AGGGTGCCCCCTATCACCGGTCCTGTTCAATATATTCATTAATGATATCC TGGACGGAACCGAGACACTTGGAGTACCGGTATCGGGAAACAATGTAGAA CGCAAAACTCGTGTCTCCGGACTTTTGTTCGCCGATGACCTTGTTGCTAT CGCCTCAACCCGGAACCGACTAGCTCAACTCGGGGATCGGCTGACCAAAT GGTTGCAGGAGAACGAGATGTCAGCCGGGATTCACAAATGCGGGGTCATG GCCATTGGCGTGAGCACGCGGCGACTCTCCTCGACGCCGGATAGATGGAA GCTTGCGGGCGCGAACCTGCCCATTGTCCGTGAATATACGTACCTGGGCC TCGTTTTCAACCGCAAGTTAGATGTGGAGGTTATGATGGGGAACAAACTG GCGGCGGGGGCCCGCATGGTATCGGCAATGGCGCCGTTTCTCCGCTGCCG ACAGATCCCCGTGCCGATGAGAGTCGCCGTCGTGCGCGGAGTGATTTTGC CCAGGCTCCTATTTGGTGCGGAGGTGTATGGCATGCGCAAAGCGATCACC CATAGGATGCAACTGCAGATGAATAAGGCATTTAGATTGGTGGCTGGAGT TGGTGCCTCGGCTGCCGTATCCAATGTCGCCCTGTGGCGGGAGCTGGACA TCCCCCCGATTTGCGCTAGCGCCGCAGCACGTCGTGCGCGAGCGCTCCAA AAAGCTAGTTCGATGAAAACTTGGGTTGCCACGATGGTCAATACACCGTT CAAGCACCGCCGCTGGACTTGGTGCACGGGAACCCACCGTTGGATGAACC GGTACATTCACCGTCTTGCTAGCTGGATTCCGGACGAATTGCCTGACAAC GTCAGACAACCGGGGGGATGGCGGGAATTAACCCCAACGATTTTAAGCTC CCACCTCACCACGGCGGTATGGCGACGCGAAGAGAGGCTGTCCCGTTCAA GGACGGCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGTCC TCGGCGCGGACGGCGGGACACGCTGCGCTTGCTGAAGGCCTCGCATACAT TATTCGATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCCGGC GGGATTTGGTTCATCCCCGATACTTAACATTGTGCCCGTGCTGCATGGAG ACGGAAGAAGAGACACTTGCGCACGTACTATTCGATTGCTCCCGGTGGCG GGAGGGTCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1342:28232..30441+

>mRNA_P-littoralis_Contig1342.4.1 ID=mRNA_P-littoralis_Contig1342.4.1|Name=mRNA_P-littoralis_Contig1342.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1905bp|location=Sequence derived from alignment at P-littoralis_Contig1342:28232..30441+ (Pylaiella littoralis U1_48)
ATGGGTGAAATGGACCGCCGCGCCTCAGCGCCCCACCTAGCATCGTTGGA
TGAACCAATAACGATGCCCGAATTGAATGAAGCCCTCCTCCGACTTAAGA
GACACAAGGCTTCCGGCCGGGACGGATTACCAGCAGATTTTCTGAAACTC
GCGGCAGGTGACGTGGGAACCGAGTCACCCATGGCCAAGGCCCTCCTAGG
GATACTCAACCTAATGTGGAAATACCAGATTATCCCCGAGGAGTGGCAGG
ACTCCACGGTGGTCTCGATCCCCAAGAAAGGAGATGTCGCCGACATGAAC
AACTACCGAGGGATCTCGCTCATGAGCACCGTCCTTAAGGTACTTGTGAT
GATTATCAGCACGCGCCTCAACGAGACCTTTGAAGAACACAACCTGTTCT
CGCACGCACAAGCAGGATTTAGGAAGAAAGAGGAATGTGTGACCCAGGCC
GCATGCCTCCTCGAGATCGCGCAACGACGCAAGCTCCAACGCAAGGCGAC
ATTTCTCATGTTCGTCGATCTCAAGAAGGCCTACGACACGGTGCCGCACG
AAGCGTTATTCGCCAAACTCGATTTTTACGGTGTGCGCGGGAACATGTTG
GGTTTTATCCGCAAGCTGTATGCGAACAGCCGTATCTCTGTCCGGACCGG
AGACCTTTTCTCGGAGACTTTTGGCCTGAAACGCGGGGTGAGACAAGGGT
GCCCCCTATCACCGGTCCTGTTCAATATATTCATTAATGATATCCTGGAC
GGAACCGAGACACTTGGAGTACCGGTATCGGGAAACAATGTAGAACGCAA
AACTCGTGTCTCCGGACTTTTGTTCGCCGATGACCTTGTTGCTATCGCCT
CAACCCGGAACCGACTAGCTCAACTCGGGGATCGGCTGACCAAATGGTTG
CAGGAGAACGAGATGTCAGCCGGGATTCACAAATGCGGGGTCATGGCCAT
TGGCGTGAGCACGCGGCGACTCTCCTCGACGCCGGATAGATGGAAGCTTG
CGGGCGCGAACCTGCCCATTGTCCGTGAATATACGTACCTGGGCCTCGTT
TTCAACCGCAAGTTAGATGTGGAGGTTATGATGGGGAACAAACTGGCGGC
GGGGGCCCGCATGGTATCGGCAATGGCGCCGTTTCTCCGCTGCCGACAGA
TCCCCGTGCCGATGAGAGTCGCCGTCGTGCGCGGAGTGATTTTGCCCAGG
CTCCTATTTGGTGCGGAGGTGTATGGCATGCGCAAAGCGATCACCCATAG
GATGCAACTGCAGATGAATAAGGCATTTAGATTGGTGGCTGGAGTTGGTG
CCTCGGCTGCCGTATCCAATGTCGCCCTGTGGCGGGAGCTGGACATCCCC
CCGATTTGCGCTAGCGCCGCAGCACGTCGTGCGCGAGCGCTCCAAAAAGC
TAGTTCGATGAAAACTTGGGTTGCCACGATGGTCAATACACCGTTCAAGC
ACCGCCGCTGGACTTGGTGCACGGGAACCCACCGTTGGATGAACCGGTAC
ATTCACCGTCTTGCTAGCTGGATTCCGGACGAATTGCCTGACAACGTCAG
ACAACCGGGGGGATGGCGGGAATTAACCCCAACGATTTTAAGCTCCCACC
TCACCACGGCGGTATGGCGACGCGAAGAGAGGCTGTCCCGTTCAAGGACG
GCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGTCCTCGGC
GCGGACGGCGGGACACGCTGCGCTTGCTGAAGGCCTCGCATACATTATTC
GATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCCGGCGGGAT
TTGGTTCATCCCCGATACTTAACATTGTGCCCGTGCTGCATGGAGACGGA
AGAAGAGACACTTGCGCACGTACTATTCGATTGCTCCCGGTGGCGGGAGG
GTCGG
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