mRNA_P-littoralis_Contig1342.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 796 bits (2057), Expect = 2.780e-275 Identity = 407/687 (59.24%), Postives = 502/687 (73.07%), Query Frame = 1
Query: 10 GKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHV---TREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
GK PLRT+R+Q+R LR ++P DSI+LMGDFNR+R V++W I+V EL KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T D +GV + T + G+ RI +PMPG++WY++ G RG+ NHQ+++H+ YW PL DL+EEG +L D A+ DAAA+RMV+ + QVA+ TK +R PALK IARAIDDRG++YR A++ R + AW Y E + AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+ GLQPV+HPD+ L+T A DISA+W+THY+RLA+DVTGNSR D+W W AAPQR H+ LD PI E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGV QGCPLSPVLFNIFINDILDG E+LGVP GN +ER R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG RRL
Sbjct: 126 GKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADAST------GDSVGVPINARTIQRGE--RINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRL 804
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 295 bits (754), Expect = 1.240e-82 Identity = 240/755 (31.79%), Postives = 344/755 (45.56%), Query Frame = 1
Query: 1 GRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVS----MMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQR-----NHQRMVHSTYWTPLLDLLEEGE-GDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV---------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSS 1959
G+ E L + SQL+ L QFP +V++GD+N E+ + L R P+ + A T + IDH V M H H R RV R D+SDH+PL+ A P + +G IE W R G +R R + Q +VH +W PL L+++ E DLD D AA R+V T +VA+ + L++ +P S A G+ + +TR A + A + Y T+ A+ VR++ R +W K +Q +R D K W++ S AG+ + QP+KHP + ++T +I+ +W ++ LA D TG+ W + ++ P P L L+ P+ E+ ALL +K KA G DG+ ADFLKL G D G ++ PMA L +L MW + +P W + VV I K +GD +M NYRGISL+ VLK+L II+ RL ++ N H QAGFR +EEC+ L E+ +RR++ + ++L F+DLKKAYDTVPH ALF KL+ GV QGCP+SP+LFN+FINDI+D LGV V G + R T + GLLFADDLV ++ ++L Q D +T W + EM G+ KC +M I + LSS
Sbjct: 272 GKRRTEVLHLLLSQLKALLRQFPSTPLVVLGDWNMREQELAKLLARWHLPLARASVCGNPATTHTPRLRPRSAIDHAVYRTDIMRTH---HQLRCRVDRSWDLSDHWPLLVRCLYHNLHQQEHAPSP---SXXXXXSYSKGTCSDIEQG--------WVRVGRMRPLRLLSEDSKQELVHHNFWNPLRALMDQEEDSDLD-------VDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSS 1001
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 273 bits (699), Expect = 2.890e-76 Identity = 222/698 (31.81%), Postives = 320/698 (45.85%), Query Frame = 1
Query: 16 EPLRT-IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV---------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIG 1935
EP R +R +L +LRE+FP+D+IV+ GD+N ++D LRR + +DA GT GS R IDH V+ L P + D SDH+P+ A P G R+ ++P P R+ P D EG + A AD + TA +V V++ R P L+ SI AI R + ++ RG ++ A Y + + +VR +RR+ +A+ A R + FWK++ +A + QPV P +GVL T +I+A W HY L D R+ W P P L ++ PI EL +AL RL +KASG DG+ A+ LKLA +SP K+LL ++N +W + +P++W S VVSI KKGDV M+NYRGIS+M ++K+L+ +++ RL + + + L Q GF EEC Q A + +IA RR+ T+ F+DL+KAYDT+PHE LF+KL+ G+ QGCP SP+LFNIFINDI DG E LG V G + + RV G LFADD V +A + + L + ++W +++ M G+ KCGVMA+G
Sbjct: 23 EPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVF-------------ASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSIDADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALG 700
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 249 bits (637), Expect = 4.410e-67 Identity = 205/678 (30.24%), Postives = 310/678 (45.72%), Query Frame = 1
Query: 43 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
LR++R++ + I+L+GDFN+ L R ++ +R G+R +G+ R IDH ++ P + +VI+ VD+SDH P+V+ + +E +P P RK + + S +LD LE DL E + + AA ++ ++E K+ K L AI R K+++ G N + + Y K+ A R DRR ++ A M T+ P+ W + +G + S + L+TG + S +W H+E LA D TGNSRS ++W + + D +T E+ AL +K+ G DG+P++ KL + SP AK ++N +W+ + IP++ S +V IPKKGD+ D NNYRGISL+ T+ KVL II+ RL++ +H++ QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ QGCP SP+LF+IFIND+LDG + GV V G + E + GLLFADD V +A + L ++LT W + EM KCG+M I ST L
Sbjct: 771 LRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWD-------------------------------MEALKIPAP----QRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAA--------------DELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML 1377
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO) HSP 1 Score: 244 bits (623), Expect = 1.160e-66 Identity = 144/426 (33.80%), Postives = 219/426 (51.41%), Query Frame = 1
Query: 784 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRR 1950
W ++EE A++ ++DR++ K L + ++ K W + +A +R +PV D L+ G +I +W++H+E+L+ D G S+ + W K P L D+PIT E+ AL + KA+G DG+P +F K+ D ESP + ++ ++ +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN + + QAGFRK EEC+ Q C EI +RR L+ K T +F+D KKAYD VPHE LFAKL YG QGCP SP LFN++IN+IL+G +G+ GN + V GLLFADD V A + + + + L W + +M I KCG+M + +R
Sbjct: 93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQR 507
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 248 bits (632), Expect = 1.420e-66 Identity = 202/681 (29.66%), Postives = 315/681 (46.26%), Query Frame = 1
Query: 43 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPI--RIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
LR+LR + +D I+L GDFN+ L R ++ + G+R +G+ R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T V I V +E G+ AAL P E ++++L +R+ ++ A+ K+ + L +A + R K ++R GD T Y + K+ + L R DRR ++ A + + W + +G R G PV + D L+T + W TH+E+LA D TGNSRS D+W T A P D P++ E+ +AL +K+ G DG+P++ KL ++ SP+AK + I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ QGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + L ++++ W Q+ EM KCG+M I STR L
Sbjct: 324 LRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPT-----VPRKINVESIKELGESFVSNNRFAALTEP-----------------------------------EFNIEDL---------TSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML 929
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG) HSP 1 Score: 234 bits (598), Expect = 9.340e-64 Identity = 191/674 (28.34%), Postives = 303/674 (44.96%), Query Frame = 1
Query: 52 LREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
LR + +D I+L GDFN+ L R ++ M K + + G R IDH+ ++ +P +V++ VD+SDH P+++ + + D+ T I V + +E G+ V + L +L E ++++L + + + ++ A+ K+ + L + I+ R K ++R GD Y + K+ + L R DRR ++ A + + W + +G R G P+ + D L+T + W TH+E LA D TGNSRS D+W P D P++ E+ +AL +K+ G DG+P++ KL + SP AK I+N +W + +P++ S VV IPKKGD+ D NNYRGISL+ T+ KV+ I++ RL ++ + + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ QGCP SP+LF+I+IND+L G + GV + G + +SGLLFADD V +A + + L ++++ W Q+ EM KCG+M I T L
Sbjct: 1 LRTKRRKDKIILAGDFNKNTDSTVALLNRIGVGLRRAMVTNSKGSRMNGATMG--RMIDHISFSGLINNPN----YAKVLKSVDLSDHLPVMAEWNIEALDSPT-----APRKINVELIKEIGE-----------------------------SFVSKNRFAALAEL----ESNIEDL---------TSSLNNGIWESAEELNAIKIEKISISTVLSKETIKVINKRRKAFKR---LIGDPKT----LIEYRDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRELWSWLKRFSGRFRSSLIDG--PIYNNDN-KLITDTNAKAEVWATHFEELAKDSTGNSRSADKWENIGTIPAV--FPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGIMGINSCTGML 603
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG) HSP 1 Score: 238 bits (607), Expect = 1.480e-63 Identity = 193/677 (28.51%), Postives = 303/677 (44.76%), Query Frame = 1
Query: 43 LRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
LR+LR + + IVLMGDFN+ L R ++ ++ G+R +G T+ M+ +A+ L P +V++ VD+SDH P++S + + P P RI+ A + G + + + ++ L D + + + + D+ T + +TA ++ K + + L I R KM+++ K + Y + K+ A +L R+DRR ++ A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W D P++ E+ AL K+ G DG+P++ K ++ SP AK L ++ +W + IPE+ S VV IPKKGD+ + NNYRGISL+ T+ KV+ II RL + ++++ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPHEAL K+ G+ QGCP SP+LF+I+IND+LDG + + +P + GLLFADD V +A + L ++LT W + EM KCGVM I ST L
Sbjct: 125 LRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVP-------------------PKRIDTAKMKEIG---------------ESFISNNRFSVLAD---------QDSNTENLVDSVTTSIWETAEELD----ALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML 731
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 236 bits (601), Expect = 7.860e-63 Identity = 192/680 (28.24%), Postives = 311/680 (45.74%), Query Frame = 1
Query: 31 IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
+ + LR+LR + + I+L+GDFN+ L R ++ + K + + G R IDH+ + A+ ++ + V++ VD+SDH P+++ + IE +P+P R + ++ R + + L L E + + + ++ T + +TA ++ K + + L I R K++++ K + Y E K+ + +L R+DRR + A + + W + +G R G P+ + L+T + + W H+E LA D TGNSRS ++W + + D P++ E+ AL +K+ G DG+P++ KL + SP AK LL ++N +W + IP++ S VV IPKKGD+ + NNYRGISL+ T+ KV+ IIS RL + ++N+ + QAGFR +EECV QA L E+ +RRK+ +T++ F+D KAYD VPH+AL K+ G+ QGCP SP+LF+IFIND+L G + GV + G + E ++GLLFADD V +A + L ++L+ W + EM KCG+M I ST L
Sbjct: 143 LTNYLRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWN-------------------------------IESLKIPLPPK---RIDTEKMKKQGTRFISDNRFAVLASL---------EPNTENLVNSVTTSIWETAEELD----ALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML 753
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Match: A0A1R1XKG1_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKG1_9FUNG) HSP 1 Score: 233 bits (593), Expect = 2.070e-61 Identity = 143/414 (34.54%), Postives = 217/414 (52.42%), Query Frame = 1
Query: 829 RQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQR--PHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV------------------------------------QGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRL 1953
R+D +K + ++ A + +P+ W++ A KR + S P+ ++ G + W H+E LA DV+GNS+ D KW QR + D+ IT ++ A+ +KA G DG+P++ KL + ES ++K L+ +L MW IPE + S +V IPKKGD D NNYRGISL+ T++K+L I++ +LNE ++NL QAGFR +EECV+QA L E+ +RRK++ T++ F+D KAYD VPHEAL +KL + QGCP SP+LF++FINDIL+ + + +P ++ GLLFADD V A + + L +R+++W ++ EM KCGV+ IG ST+ +
Sbjct: 795 REDYKKKSNREIKKACKLYLENNPRFLWRWLKYQA--KRFNASSIDGPIFDRHRNIVTDGL-EKEKVWADHFEELAKDVSGNSKCAD---KWGEIEQRHNEYYEECDKNITWDDIRRAIKVTPNNKAPGIDGIPSELWKLVQEEKNPESYLSKLLVELLLKMWNSAHIPEIFNTSIIVPIPKKGDPRDTNNYRGISLIPTLVKILAKIVAQKLNELDFKYNLLVKEQAGFRSREECVSQATVLYEVVRRRKIKGIPTWIGFIDFAKAYDRVPHEALLSKLKSQKIGGQLHRVISALYKSPRICVRVGNSISRKFEYSRGVRQGCPASPMLFDLFINDILENIKGINIPTINK------KIKGLLFADDAVVFADSPSELQIAFERVSEWAEKWEMQVNASKCGVIGIGQSTKMI 1196 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1342.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1342.1.1 >prot_P-littoralis_Contig1342.1.1 ID=prot_P-littoralis_Contig1342.1.1|Name=mRNA_P-littoralis_Contig1342.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=653bp GRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPback to top mRNA from alignment at P-littoralis_Contig1342:11724..13792+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1342.1.1 ID=mRNA_P-littoralis_Contig1342.1.1|Name=mRNA_P-littoralis_Contig1342.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2069bp|location=Sequence derived from alignment at P-littoralis_Contig1342:11724..13792+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1342:11724..13792+ >mRNA_P-littoralis_Contig1342.1.1 ID=mRNA_P-littoralis_Contig1342.1.1|Name=mRNA_P-littoralis_Contig1342.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1959bp|location=Sequence derived from alignment at P-littoralis_Contig1342:11724..13792+ (Pylaiella littoralis U1_48)back to top |