prot_P-littoralis_Contig1341.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1341.1.1
Unique Nameprot_P-littoralis_Contig1341.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length81
Homology
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5JNH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 3.730e-45
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHVTSE+QHADFLTKAIS+ESF LHR FVMNLQ
Sbjct:   40 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 119          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5KPI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI2_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 6.370e-43
Identity = 69/80 (86.25%), Postives = 74/80 (92.50%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE S THVTSE+QHADFLTKAIS+E F LHR FVMN Q
Sbjct:    1 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISNTHVTSEFQHADFLTKAISKEPFALHRDFVMNSQ 80          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5JT91_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT91_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.040e-41
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHVTSE+QHADFLTKAIS+ESF LHR FVMNLQ
Sbjct:  351 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 430          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5K826_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K826_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 8.560e-41
Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHV +++QHADFLTKAI +E   LHR FVMNLQ
Sbjct:   24 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAICKEPCALHRDFVMNLQ 103          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5K9U4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U4_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 2.850e-40
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHVTSE+QHADFLTKAIS+ESF LHR FVMNLQ
Sbjct:  700 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 779          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 3.540e-40
Identity = 72/80 (90.00%), Postives = 77/80 (96.25%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHVTSE+QHADFLTKAIS+ESF LHR FVMNLQ
Sbjct: 1393 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1472          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.220e-39
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQI HNPITNSNS+HIDVRHHFIRELV+RKE SITHV +++QHADFLTKAIS+ESF LHR FVMNLQ
Sbjct:  297 MPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNLQ 376          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.110e-39
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNLQ 80
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SIT+V + +QHADFLTKAIS+ESF LHR FVMNLQ
Sbjct:  242 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNLQ 321          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5JTT9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT9_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 3.610e-39
Identity = 66/79 (83.54%), Postives = 71/79 (89.87%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVMNL 79
            MPCIPVFE+N   IQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHVTSE+QH D LTKAIS+ESF LHR FVMNL
Sbjct:   90 MPCIPVFEDNNQRIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHVDSLTKAISKESFALHRDFVMNL 168          
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 4.290e-39
Identity = 67/77 (87.01%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHVTSEYQHADFLTKAISRESFDLHRGFVM 77
            MPCIPVFE+NQGAIQIAHNPITNSNS+HIDVRHHFIRELV+RKE SITHVTSE+QHADFLTKA S+ESF LHR FV+
Sbjct:  232 MPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKATSKESFALHRDFVI 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1341.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNH6_9PHAE3.730e-4590.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPI2_9PHAE6.370e-4386.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT91_9PHAE1.040e-4190.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K826_9PHAE8.560e-4182.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U4_9PHAE2.850e-4090.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JHY5_9PHAE3.540e-4090.00Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5L4G9_9PHAE1.220e-3985.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE2.110e-3985.00Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT9_9PHAE3.610e-3983.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K684_9PHAE4.290e-3987.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..74
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 9..74
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 4..67
e-value: 1.58471E-25
score: 89.8349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1341contigP-littoralis_Contig1341:1590..1832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1341.1.1mRNA_P-littoralis_Contig1341.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1341 1590..1934 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1341.1.1 ID=prot_P-littoralis_Contig1341.1.1|Name=mRNA_P-littoralis_Contig1341.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp
MPCIPVFENNQGAIQIAHNPITNSNSQHIDVRHHFIRELVKRKEFSITHV
TSEYQHADFLTKAISRESFDLHRGFVMNLQ*
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