mRNA_P-littoralis_Contig134.84.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 274 bits (701), Expect = 2.300e-84 Identity = 150/310 (48.39%), Postives = 181/310 (58.39%), Query Frame = 1
Query: 1 ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE--------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAI+R WG++K+IERRVCDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 351 AIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 660
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 270 bits (690), Expect = 3.550e-80 Identity = 151/324 (46.60%), Postives = 181/324 (55.86%), Query Frame = 1
Query: 1 ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE----------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 785 AIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 1108
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 255 bits (652), Expect = 1.810e-79 Identity = 149/358 (41.62%), Postives = 181/358 (50.56%), Query Frame = 1
Query: 1 ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE--------------------------------------------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
A+F FE+SR+PGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYS+ SLL RLP TLS+++LSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 110 AIFAAFEISRQPGRQMLEVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRWDHWFSFLFQGLKCRRALHASFEVDVLFEVSSAFSLELYSAAMHLDSRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVTLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 467
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 230 bits (587), Expect = 1.980e-69 Identity = 132/297 (44.44%), Postives = 160/297 (53.87%), Query Frame = 1
Query: 1 ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAE----------------------------------------------------------------------EGDGSECGNEGGEDTEPDRQGEGDT-------------------RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATG 624
A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + D S N+GGE + +GEGD+ RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ G
Sbjct: 220 AIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHG 516
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 200 bits (509), Expect = 4.870e-59 Identity = 111/235 (47.23%), Postives = 133/235 (56.60%), Query Frame = 1
Query: 1 ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEGDGSECGNEGGEDTEPDRQGEGDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
A+F FE+SREPGRQM +FDNSTGH AYSPDALRAQN+ A GG+Q PR F + GR I T F EG VL F ++P +K E + G TR L +R WG++K+IERRVCDYS+ SLL RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT HRS TD D VL
Sbjct: 161 AIFAAFEISREPGRQMLAVFDNSTGHNAYSPDALRAQNIRASPGGEQIPPRNFEYNGRTIYTTFREGDVLCFRSSPFARKTE------------------AEAVGTTRSSML----------------------------------------FQRFWGYTKSIERRVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVL 337
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 176 bits (447), Expect = 3.820e-49 Identity = 108/263 (41.06%), Postives = 131/263 (49.81%), Query Frame = 1
Query: 1 ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPRPFVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEG----------------------------------------------------------------------DGSECGNEGGEDTEP---DRQG---------------EGDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSL 525
A+F FELSREPGRQM +FDNSTGH A+SPDALRAQN+A AGG+Q P F + GR I T F+ G L F T P +K EE D S+ N+GGE + D + +G +RRCC R ++S + AF+EQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++KAIERRVCDYS++SL
Sbjct: 198 AIFAAFELSREPGRQMLMVFDNSTGHNAFSPDALRAQNIALSAGGEQVPPHSFEYNGRTIYTTFQLGDKLRFKTAPFARKTEEEKTAKKRNGKKLGVFPIGTVIRQGTPSEKLVGIAKGMKEILEDMELYKLDGESKPPKLECQRCLDEAKAKRDKSKMYNKGGESRQQALADNEDSDXXXXXXXXXXXXTDGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSL 460
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5JR66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR66_9PHAE) HSP 1 Score: 166 bits (419), Expect = 2.740e-46 Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 1
Query: 250 GDGSECGNEGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
G G E G E G GE G RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 146 GQGEEDGGEDGASVGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKYLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 298
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 161 bits (407), Expect = 5.420e-46 Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 1
Query: 148 PRPFVHEGR--RIPTVFEEGSVLLFDTNPTPKKA---EEGDGSECGNEGGEDTEPDRQGE-GDTRRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
P P VHE R R ++ F+ ++ G G E G E G+ + GE G RRCC+ VLS L AF+E+ N VE +F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++ DLK+W HR +T R DAV+
Sbjct: 10 PTPRVHECRACRAEKAATRQAITAFNRGGEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGDAVI 201
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE) HSP 1 Score: 161 bits (408), Expect = 5.770e-45 Identity = 71/128 (55.47%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 322 RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Match: A0A6H5LC28_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC28_9PHAE) HSP 1 Score: 162 bits (409), Expect = 6.760e-45 Identity = 71/128 (55.47%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 322 RRCCLRFVLSNLPAFKEQKNRVEEVFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCDYSIKSLLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTCHRSSTDRVDAVL 705
RRCC+ VLS L AF+E+ N VE++F+A GH CIFLPKYHPE NAIER WG+ K + R C+YS++ +L+ LP LS + IR W+R++WLY+EAY GL+ Y++YRDLK+W HR +T R DAV+
Sbjct: 108 RRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGDAVI 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig134.84.1 >prot_P-littoralis_Contig134.84.1 ID=prot_P-littoralis_Contig134.84.1|Name=mRNA_P-littoralis_Contig134.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=235bp ALFVVFELSREPGRQMFNIFDNSTGHAAYSPDALRAQNVAAGAGGQQAVPback to top mRNA from alignment at P-littoralis_Contig134:433909..435355+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig134.84.1 ID=mRNA_P-littoralis_Contig134.84.1|Name=mRNA_P-littoralis_Contig134.84.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1447bp|location=Sequence derived from alignment at P-littoralis_Contig134:433909..435355+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig134:433909..435355+ >mRNA_P-littoralis_Contig134.84.1 ID=mRNA_P-littoralis_Contig134.84.1|Name=mRNA_P-littoralis_Contig134.84.1|organism=Pylaiella littoralis U1_48|type=CDS|length=705bp|location=Sequence derived from alignment at P-littoralis_Contig134:433909..435355+ (Pylaiella littoralis U1_48)back to top |