prot_P-littoralis_Contig134.73.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig134.73.2
Unique Nameprot_P-littoralis_Contig134.73.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length175
Homology
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BLAST of mRNA_P-littoralis_Contig134.73.2 vs. uniprot
Match: D7G657_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G657_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 9.320e-26
Identity = 77/113 (68.14%), Postives = 88/113 (77.88%), Query Frame = 0 
Query:    1 MSNKEKKKQEAAKREVQAEEARKLKAEKAAREAKAMRDSGIQMVDDGTDLTEGSANPNRKNGADGE--GQWASGIDAAIGSLSLKGGRGXXXXXXEEKHPEKRLKAVSARWAE 111
            +SNKEKK+QEAAKR+ QAEEARK KAE+A +EAKAMRDSGIQM DD ++L+ GSANPNRK GADG   G WASGIDAAIGSLSL+G          E+HPEKRLKA  A + E
Sbjct:  111 VSNKEKKRQEAAKRQAQAEEARKAKAERAEKEAKAMRDSGIQMGDD-SELS-GSANPNRK-GADGGDGGDWASGIDAAIGSLSLEGA------GPAERHPEKRLKAALAAYEE 214
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BLAST of mRNA_P-littoralis_Contig134.73.2 vs. uniprot
Match: A0A6H5L325_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L325_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.050e-25
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0 
Query:    1 MSNKEKKKQEAAKREVQAEEARKLKAEKAAREAKAMRDSGIQMVDDGTDLTEGSANPNRKNGADGE--GQWASGIDAAIGSLSLKGGRGXXXXXXEEKHPEKRLKA 104
            +SNKEKK+QEAAKR+ QAEEARK KAE+A +EAKAMRDSGIQM DD +DL+ GSANPNRK GADG   G WASGIDAAIGSLSL+G          E+HPEKRLKA
Sbjct:  106 VSNKEKKRQEAAKRQAQAEEARKAKAERAEKEAKAMRDSGIQMGDD-SDLS-GSANPNRK-GADGGDGGDWASGIDAAIGSLSLEGA------GPAERHPEKRLKA 202
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.73.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G657_ECTSI9.320e-2668.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L325_9PHAE1.050e-2571.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100
IPR010422Coiled-coil domain-containing protein 124/Oxs1PFAMPF06244Ccdc124coord: 56..111
e-value: 6.5E-5
score: 23.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig134contigP-littoralis_Contig134:403003..404138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig134.73.2mRNA_P-littoralis_Contig134.73.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig134 401718..406371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig134.73.2 ID=prot_P-littoralis_Contig134.73.2|Name=mRNA_P-littoralis_Contig134.73.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=175bp
MSNKEKKKQEAAKREVQAEEARKLKAEKAAREAKAMRDSGIQMVDDGTDL
TEGSANPNRKNGADGEGQWASGIDAAIGSLSLKGGRGGGGGGAEEKHPEK
RLKAVSARWAEGDRARTSTRGARGGSVGVSLLLVRTGTSSVHVMMCIRRR
CGGGKNKKTNNSLLRATFLPSWLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010422Ccdc124/Oxs1