mRNA_P-littoralis_Contig134.67.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig134.67.4
Unique NamemRNA_P-littoralis_Contig134.67.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: D7G656_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G656_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 2.420e-109
Identity = 240/400 (60.00%), Postives = 256/400 (64.00%), Query Frame = 1 
Query:  304 ENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKGNGLRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGN--------------GAGSPLSQLDGHAPVAAPGTPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSGGAALAVTSAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXXXXXXDPSSQPLLKKVRPSPV-------------------------------ACAMTPSTWSLPPR-----PFPPATDVTGVVVDDFTPSGLQGSDTEEGHLSGLSDLESLMDDQ 1353
            +NTGRWTYDEHRLFLRGLELHGKGWKKIASLI+TRTVVQIRTHAQKYFQKIAKAKQNG+HG+VAMD+KG+G RRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPI+I+DLER PAA         AG GG               G  S  SQL GHA  +A      XXXXXXXXXXXXXVLPPNWYRAGRGVDDLL+EAEGLDWLADSGGA +AVTS                                    XXXXXXXX               + SSQPLLKKVR + V                                 AMTPS+WSLPP      P   A    GV VD+ TPSGLQGSD EEGHLSGLSDLESLM+DQ
Sbjct:    4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPITIQDLERPPAA---------AGQGGTAXXXXXXXXXXXXXGGASLQSQLAGHATSSAXXXXX-XXXXXXXXXXXXXVLPPNWYRAGRGVDDLLTEAEGLDWLADSGGA-VAVTSV--------------------------SAVNPAAAXXXXXXXXXVAGAHAGVARVASSSELSSQPLLKKVRSTTVDSSAPLATATTMNXXXXXXXXXXXXXXXXXXXXAMTPSSWSLPPPRPVACPXXXAPPTAGVAVDELTPSGLQGSDAEEGHLSGLSDLESLMEDQ 366
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A6H5L4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H1_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 1.230e-80
Identity = 180/273 (65.93%), Postives = 191/273 (69.96%), Query Frame = 1 
Query:  136 GYVRAGATGQGSXXXXXXXXXXXXXMAIGATAPAPAGGGFHGSNGGAEVEEGGAVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKGNGLRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGNGAGSPLSQLDGHAPVAAPGTPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSGGAALAVTS 954
            GYVRAGA GQGS XXXXXXXXXXXX                      + EEGG VKENTGRWTYDEHRLFLRGLELHGKGWKKIASLI+TRTVVQIRTHAQKYFQKIAKAKQNG+HG+VAMD+KG+G RRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFL+           +AGA                SP +   G A   A                   VLPPNWYRAGRGVDDLL+EAEGLDWLADSGGA +AVTS
Sbjct:  535 GYVRAGAVGQGSAXXXXXXXXXXXXXXX-------------------DGEEGGPVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAGAVETGLYRFLAG------HASSSAGA----------------SPTTATAGAATAVA-----------------AAVLPPNWYRAGRGVDDLLTEAEGLDWLADSGGA-VAVTS 748
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A6U4FI15_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FI15_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.140e-41
Identity = 112/217 (51.61%), Postives = 131/217 (60.37%), Query Frame = 1 
Query:  301 KENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNG-DHGEVAMDAKGNGLRRKSRGRRRMEDLLRGSTAVAPSLQPYVAGAG---AVETGLYRFLSPISIED-LERRPAAGAGGVGEVGAGTGGNGAGSPLSQLDGHAPVAAPG-TPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSGG 933
            KENTGRW+Y+EHRLFL+GLE+HGKGWKKIA LI+TRTVVQIRTHAQKYFQK+AKAKQ G + G V +D    GL RK+ G+R+   L    TAVAPSLQPY+   G   +VE+GLY+FLSP  I   ++   AA A                S        A  A  G TP                  P+WY  G  VD LL+EAEGLDWLADSGG
Sbjct:   28 KENTGRWSYEEHRLFLKGLEMHGKGWKKIAELIKTRTVVQIRTHAQKYFQKLAKAKQGGAEPGAVLLDR---GLGRKN-GKRKSGSLE--GTAVAPSLQPYMTLPGVNGSVESGLYKFLSPNVITSFVDDDKAAKAQAASRA----------SXXXXXXXXAQRAKQGVTPAEAVRMGYAPT-------PDWYAKGNNVDVLLNEAEGLDWLADSGG 221
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: W7TWM0_9STRA (SANT/Myb domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWM0_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.120e-33
Identity = 105/262 (40.08%), Postives = 141/262 (53.82%), Query Frame = 1 
Query:  301 KENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEV-AMDA-KGNGLRRKSRGRRRMEDLLRGS---------TAVAPSLQPYVAGA----------------GAVETGLYRFLSPISIEDLERR-------------PAAGAGGVGEVGA--------GTGGNGAGSPLSQLDGHAPVAAPGTPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSGGAAL 942
            +ENTGRWT +EH LFL+GLE+HGKGWKKIA LI+TRTVVQIRTHAQKYFQK+AKAK+NG HG++  M+  +  G R K  G+RR   L+ GS          A++P+LQ Y+ G+                 A+E GLYRFLSP+ ++                  P  G    G VGA        G+ G G    +S+    A  ++ G PLP              +P  W+  G  +++LL++A  +DW  DSGG A+
Sbjct:   97 RENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRR--GLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSG-GDNVDVSETTDDADSSS-GEPLPRLARVTNDMYERCSVP-TWFMKGGDIEELLADAAAIDWREDSGGDAV 353
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A1Z5KDK7_FISSO (Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDK7_FISSO)

HSP 1 Score: 131 bits (329), Expect = 7.770e-30
Identity = 97/271 (35.79%), Postives = 130/271 (47.97%), Query Frame = 1 
Query:  295 AVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKG----------------NGLRRKSRGRRR--MEDLLRGST---------------------AVAPSLQPYV-----AGAG--------------AVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGNGAGSPLSQLDGHAPVAAPG-TPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSG 930
            A  ENTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG+ G++ M+ +G                N  RR   G +R  ++ ++  +                       +AP+L  +V     + AG              A+E  L+RFL+P+ I        A   G   +            L   +G A  + PG +P                 PP+WY  G  VD LL  ++ LDWLAD+G
Sbjct:   93 APGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRGGNASITSNTTATAAMTNKRRRHITGTKRKVIQSVVASAQRQAKKANLTEIGNPSKNVAVPGIAPALAYFVTPTPSSSAGPDTDLMTDDHISGPALEDSLFRFLTPVPIATDHVNDVARQAGANPI-----------TLPSTNGQALASVPGRSPTGVQDLSIYPSWTDAKDPPSWYAKGADVDALLDVSDTLDWLADTG 352
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A7S2UGN8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGN8_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.420e-29
Identity = 101/272 (37.13%), Postives = 133/272 (48.90%), Query Frame = 1 
Query:  304 ENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKGN----------------------------------------GLRRKSRGRRRMEDLLRGSTA------VAPSLQPYVAGAG---------AVETGLYRFLSPISIEDLERRPAAGAG-GVGEVGAGTGGNGAGSPLSQLDGHAPV-AAPGTPLPXXXXXXXXXXXXXVLP------PNWYRAGRGVDDLLSEAEGLDWLADSG 930
            ENTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK++KA+QNG+ G+V+M+ +G                                           +R+ + ++ M    +GS++      VAP+L PYV   G         A+E  L+R+L+P         P  G    V  V    G N    P+   DG A   +A  +P               V        P W+  G  VDDLL+EA+ LDWLAD+G
Sbjct:   72 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLSKARQNGEEGDVSMEGRGGIDMLTPGIIVSSALPPSSXXXXXXXXXXXXXXXAISSVVASAQREGK-KQSMAASSKGSSSIPTLPVVAPALAPYVIANGGPQGTISASALENSLFRYLTPAGSAPSTADPLFGQHPAVNAVARQAGAN----PIVLPDGAALADSAELSPTGVADQHNLLLFPSWVSDGKESSAPTWFSKGGDVDDLLTEADALDWLADTG 338
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A7S1V9A3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V9A3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 7.090e-29
Identity = 100/273 (36.63%), Postives = 129/273 (47.25%), Query Frame = 1 
Query:  289 GGAVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKGN------GL----------RRKSRGRRRM----------EDLLRGSTAVAPSLQP--------------------------------YVAGAG-AVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGNGAGSPLSQLDGHAPVAAPGTPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSG 930
            GG   ENTGRWT DEHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG+ G+V+MDA+G       GL          RR++ G +R            +  R +   A S+ P                                + A  G A+E  L+RFL+P  +   ++        V +V    G N    P         ++   +P                  P+WY  G  VD LL  A+GLDWL D+G
Sbjct:  160 GGTQGENTGRWTADEHRLFLQGLEEHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVSMDARGGTASVALGLPVSTSASGKRRRQTTGTKRKAISSVVASVTREAKRXAQQPAGSILPPQQLXXXXXXXXXXXXXXXXXXXXXXXXXSSAHSAITGPALEDSLFRFLTPAPVAPNDQVQ------VNDVARQAGANPITVPTDNPSAAPSISGEVSPTCVTDVAIFPSWTDAKDMPSWYAKGADVDVLLDAADGLDWLTDTG 426
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A6S8P3T4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8P3T4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 7.430e-28
Identity = 102/261 (39.08%), Postives = 128/261 (49.04%), Query Frame = 1 
Query:  304 ENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKGN---------------------------GLRRK-------SRGRRRMEDLLRGST----AVAPSLQPYV----AG--------AGAVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGNGAGSPLSQLDGHAPVAAPG--TPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSG 930
            ENTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG+ GEV M+ +G                            G +RK       S  ++  +  + G      AVAP+L  +V    AG        + A+E  L+RFL+P  +   +  P      + +V    G N    P S+    AP    G  +P                 PP WY  G  VD LL  A  LDWLAD G
Sbjct:   43 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGEVIMEGRGGLSTTAGHDLVGXXXXXXXXXXXXXPLAGTKRKAIQSIVHSAQKQGKKMAVEGKPLPLPAVAPALANFVVRDKAGFAANGTLTSSALEDSLFRFLTPAPVSTTDS-PV-----LNDVARQAGANPITLP-SENPSSAPTNGDGEVSPTCVADINIYPSWTDGKDPPAWYAKGADVDALLDVAGTLDWLADPG 296
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: B7GAW9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW9_PHATC)

HSP 1 Score: 125 bits (313), Expect = 1.580e-27
Identity = 96/278 (34.53%), Postives = 126/278 (45.32%), Query Frame = 1 
Query:  292 GAVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKGN---------------------GLRRKS------RGRRRMEDLLRGST-------------AVAPSLQPYVA-----------------------GAGAVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGNGAGSPLSQLDGHAPVAAPG--TPLPXXXXXXXXXXXXXVLPPNWYRAGRGVDDLLSEAEGLDWLADSG 930
            G+  ENTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG+ G+VAM+ +G                      G +RK+        +R+ + L    T              VAP+L  Y                            A+E  L+RFL+P+ + +      A   G   +   T      +P S      P    G  +P                 PP+WY  G  +D LL   + LDWL D+G
Sbjct:  111 GSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAVKEEYVSPTNLSGPALEDSLFRFLTPLPVSEPPLNEVARQAGANPISLPTD-----NPSS-----IPTVGAGEISPTGVSDLMLYPSWTDSKEPPSWYSKGADIDALLDMGDSLDWLDDTG 378
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BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Match: A0A8J9S9N3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9N3_PHATR)

HSP 1 Score: 119 bits (299), Expect = 4.300e-27
Identity = 56/73 (76.71%), Postives = 67/73 (91.78%), Query Frame = 1 
Query:  292 GAVKENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQKIAKAKQNGDHGEVAMDAKG 510
            G+  ENTGRWT +EHRLFL+GLE HGKGWKKIASLI++RTVVQIRTHAQKYFQK+AKA+QNG+ G+VAM+ +G
Sbjct:  111 GSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG 183
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.67.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G656_ECTSI2.420e-10960.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H1_9PHAE1.230e-8065.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6U4FI15_9STRA1.140e-4151.61Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TWM0_9STRA3.120e-3340.08SANT/Myb domain protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1Z5KDK7_FISSO7.770e-3035.79Protein MYSM1 n=2 Tax=Fistulifera solaris TaxID=15... [more]
A0A7S2UGN8_9STRA2.420e-2937.13Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1V9A3_9STRA7.090e-2936.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A6S8P3T4_9STRA7.430e-2839.08Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7GAW9_PHATC1.580e-2734.53Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A8J9S9N3_PHATR4.300e-2776.71Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig134contigP-littoralis_Contig134:388928..394445 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G656
PFAMsMyb_DNA-binding
Model size1353
Max annot lvl2759|Eukaryota
KEGG koko:K03797,ko:K09391
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.97e-110
EggNOG OGsKOG0724@1|root,KOG0724@2759|Eukaryota
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-11_005250.1
EC3.4.21.102
Descriptionubiquitin modification-dependent histone binding
Cds size1353
COG categoryK
BRITEko00000,ko01000,ko01002,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig134.67.4prot_P-littoralis_Contig134.67.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig134 388928..394445 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789617.8339124-CDS-P-littoralis_Contig134:388927..3892331680789617.8339124-CDS-P-littoralis_Contig134:388927..389233Pylaiella littoralis U1_48CDSP-littoralis_Contig134 388928..389233 +
1680789617.8443465-CDS-P-littoralis_Contig134:390152..3903821680789617.8443465-CDS-P-littoralis_Contig134:390152..390382Pylaiella littoralis U1_48CDSP-littoralis_Contig134 390153..390382 +
1680789617.8541-CDS-P-littoralis_Contig134:391196..3913231680789617.8541-CDS-P-littoralis_Contig134:391196..391323Pylaiella littoralis U1_48CDSP-littoralis_Contig134 391197..391323 +
1680789617.8664086-CDS-P-littoralis_Contig134:391801..3918961680789617.8664086-CDS-P-littoralis_Contig134:391801..391896Pylaiella littoralis U1_48CDSP-littoralis_Contig134 391802..391896 +
1680789617.8828955-CDS-P-littoralis_Contig134:392842..3933241680789617.8828955-CDS-P-littoralis_Contig134:392842..393324Pylaiella littoralis U1_48CDSP-littoralis_Contig134 392843..393324 +
1680789617.8952842-CDS-P-littoralis_Contig134:394332..3944451680789617.8952842-CDS-P-littoralis_Contig134:394332..394445Pylaiella littoralis U1_48CDSP-littoralis_Contig134 394333..394445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig134.67.4

>prot_P-littoralis_Contig134.67.4 ID=prot_P-littoralis_Contig134.67.4|Name=mRNA_P-littoralis_Contig134.67.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=451bp
MTAAGRSVCTATGAATAPAAAPGAAGGVAGAHHHHHHHHHHQPPPGYVRA
GATGQGSIGAASVGGAGPGGMAIGATAPAPAGGGFHGSNGGAEVEEGGAV
KENTGRWTYDEHRLFLRGLELHGKGWKKIASLIRTRTVVQIRTHAQKYFQ
KIAKAKQNGDHGEVAMDAKGNGLRRKSRGRRRMEDLLRGSTAVAPSLQPY
VAGAGAVETGLYRFLSPISIEDLERRPAAGAGGVGEVGAGTGGNGAGSPL
SQLDGHAPVAAPGTPLPPPTSAAAVAAAAAVLPPNWYRAGRGVDDLLSEA
EGLDWLADSGGAALAVTSAVPSAAAAAASAASAAAAAAAATAVTAAVTAG
LSSITTTTSNNSSSNNSSLQARAAPPPDPSSQPLLKKVRPSPVACAMTPS
TWSLPPRPFPPATDVTGVVVDDFTPSGLQGSDTEEGHLSGLSDLESLMDD
Q
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mRNA from alignment at P-littoralis_Contig134:388928..394445+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig134.67.4 ID=mRNA_P-littoralis_Contig134.67.4|Name=mRNA_P-littoralis_Contig134.67.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5518bp|location=Sequence derived from alignment at P-littoralis_Contig134:388928..394445+ (Pylaiella littoralis U1_48)
ATGACGGCCGCCGGCCGCAGTGTATGCACCGCCACGGGTGCCGCAACGGC
GCCAGCGGCGGCCCCGGGAGCGGCGGGGGGTGTTGCAGGGGCGCATCACC
ACCACCACCACCACCACCACCACCAGCCCCCGCCGGGCTATGTTCGGGCT
GGTGCCACGGGACAGGGCTCTATCGGGGCGGCCTCGGTGGGAGGAGCAGG
GCCGGGTGGCATGGCGATCGGGGCCACGGCGCCGGCGCCGGCGGGGGGCG
GCTTTCACGGCAGCAATGGCGGCGCGGAAGTGGAAGAGGGTGGGGCGGTT
AAAGAGGTGAGGTGACGTGCACATCGGAAGAGTATACTTCGGAGACTATA
AGACGGCAGCAGCCGAGGTGCAATACCCGCTCGCTTGCCGTGCAATCCAG
TGCGGCGTGGCCCCACCGCAGAGTGAACGCCTCAGAAACAGATCCGCTCT
TTGCGACAGGGCCCATGTACACGGGACGAAGCAAGGGCGTTCTACGTTCA
GCTCTTCAGTTTTATTTTGGTCGTTGTGTCACTACTACACTAGCGACCGT
TTCGACTTCCACTTGCCTACAGCAGTATGATCGTCCGTCGTACGCAGCAC
GGCCCCCCCTGGGTAAAAAGCCGTATTTGTTTTTAGTTTTTGCCATTTCT
TTCTGTTGCGCGCGTTGCGTGCGTGTGAACGTGTGTGCGTGTGTTTACCA
GGATATGCGGTTTCTGGTTCTGGCCTTGGTCCTAGTTGTGATGTCGGCTC
CAAAAAATACAGGAAATGTGGTTCTGGTTCTAGTTCTGGTTCTGATTTCA
TGCGCACCGGTTACGTGCAGCCCTCGGGGCGGCGCTGGTCGTGATTTTAT
TTTTATATTTTCGTCCACACAAATTGGTCGGTGAAATCCCGCCCCCTTTC
GGTTACTGGTATCCACGCCCTCATCATGTGATCATGTGGGCTACCCCCCC
CCCCCCCCCCTCCTCCCCCTTTAAAGTTCACCTCAACACCCCGTCCTTCA
CATGTGGTGCATTCACGGGGCCCCGAGTACTGTACCGAATCTCAAATCAC
CCAGTTCAAGTGACCAAAGCGTGCGTCACACCCGGCATTGACATGAACGG
GGTGGACGGGTGGTCAAAGTAAGAGGCCAAAATTGCCTCCCAGGACAAGC
ACCGAATCTATCGAGTGACGCTCTCCCCCACCATCCTCCTCCGTTGTCTT
GGATCGGCCTCGTGGCTGGCTACAGAACACGGGGCGATGGACGTACGACG
AGCACCGGCTGTTCCTGCGAGGGCTGGAGCTCCACGGCAAGGGGTGGAAG
AAGATCGCGTCGCTCATCAGGACGAGGACGGTGGTGCAGATACGCACGCA
CGCCCAGAAGTACTTCCAGAAGATAGCCAAGGCCAAGCAGAACGGGGACC
ACGGGGAGGTTGCCATGGACGCTAAGGGCAACGGCTTGCGAAGAAAAAGC
AGGGGGTGAGTTTGTGGTTGTGTACATAGATGTAGTGACTACCGTGTTTG
GTTGGTCTGTTGGTTGGTCGATCGTACACGAGTGTTTTTTCGTGTGAGAG
GTTTTTACAATTGTGTCTCGCGGCTCTCGGTACTGTAAGGTTCTGGTGGC
ACTACGTGGTAGTGGAGTTTGATGCGACGTTGGTACATGCTGGGAATGTG
ACACGAGTCGTCCAGGCAATCGTACCGGCCGCGCCCCTCCCTGTCTCTGT
TGATCTCGCCGTGTGTATCTTTATCCCTCCCTCTCACTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGCGTGTCTTTATAC
CAAACTCGTGAACCAGAGGGGGGGTTGCTTCGTGAAAATCGCCCACCACC
GGTCTTTGATCTGCTGTGTGCGGCATGCTATCATATCACATCGCTACGCG
CTTGCTTTGAAGTTCATCGAAACCAAATGTGCCTTTATAGCAGCAGCTGC
AGCAGCAGCAACATCTGTGTTTTCGATGTCCGGGTGCGCGGGAGTAATAC
CTCGGGCTGTCGTACACATACATGACCGTTGATGTTCCGGCCGGTTTTTC
CCCCTCTTGGGGGCCTGTCCTTTGTGTGATCCGCGGTCTGGGTACAGATT
TCCGTTGACCCGGCGGTTGGTTTGCTCGCTGTTGGCTGCCATGTGTTTAA
TCCTCGGTCTGGCAACAGATGTCCGTTGAATTATTTGACGGTTCGTTGTG
CTCGTTGTTACCCCTGCCGTGTTTTATCGGTGGATTCCGGCGCGTTGTAT
TTTTTGTTTTTTTAATCAGACGGAGACGAATGGAAGACTTGCTGAGGGGT
TCCACGGCGGTGGCGCCTTCTCTCCAGCCCTACGTGGCCGGGGCTGGGGC
TGTCGAGACCGGCTTGTACCGCTTTCTGTCCCCCATATCCATTGAGGTGA
GGTTTGCCTTCCACCAGCGAAAGCGGGGGGAGGGCAGTCTGTCGTTGTTG
TGGTTGAAACTCGAACATGAGACTTTTGTCAAGAAAATGCTTGAAGAAGA
GTATTGGGAAGTTAGAGAGGCTCGGTGGTTGGAAGACGTGCACGACACGC
ACGTTGTTGTTCGCTGAATGCGCCCTCTTATTCGCATTGTAGGGGGGCGT
AAGGGTCGTTTTGGGTCACGAGGGTTTCGTTGTTTTTTCTAGCCAGATGT
GTAATCCTGGACATGTGTATACAATAGAAAGTAATTCGAAGAATATTATT
TCAACACGTGACAGCTTTTTTTTCTGGCTATCCGTTGTTTGTCTACCTAC
ATGTATGTACGAAAGTATTTTTATTTATGTGTTCATTTATTTATTTTTGG
TTCCTGCTCAACTTTTTACACTTCATTTCTTCATGTTGAATGAAATTTTA
CTCTTTTTTTTGTGTGTGTGGCAGGATCTGGAGAGGCGGCCAGCCGCTGG
GGCAGGCGGTGTGGGCGAGGTGGGAGCGGGAACCGGTGGGAATGGTGCGG
GTTCGCCTCTGTCTCAGCTGTAAGTTTAGTTTTTAGTTTTTCCCTCTGAG
TCAAATGGTTGGTCACTGGAGAGTAGAGAGGTGTCACTATAGAGGTGGCA
ATCATACATCACTCATCGCCATGCCGCACTATGCTACTGCAAGGGGCTTG
GAAGGGACGCAAAACATGTAGCACAACGCGATGAACGGCCTGCCGGCCTG
TTCATCGTACGAACGGCTTGCTGGCCTTCTCATTGTACAAACGGCCAGCT
GGCCTGTTCATCTTGCGAACAGCCTGCTGGCCTGCTCGGCGTACGACCCG
AAAAAAAGAGCAACAACGAAGGACCCACCTGCCTACCCACGAGAGAAAGC
AGGTCTCAAGTTGTGCGGAAAAGAAAAAAGCACGCGACACTTCGGCTTTT
CGTGTGGGATCAATGCATTGTGTGTCCGACTTTGTTATTGCCCACGAGAA
GCATTCATTTTCGTCTTCTCTCTTCTTTTGTTTTTACAGCATTCATGTCC
AGGGGTGCAAACAACTGCTGTCGCTGCGTTTTTGTCCTGCATTCGCGGTG
TCTTCTTGTGGATACTCTACCGTTGTACTGCTACGTCACGCGAGGAATTC
AAATGCAACGCTCGCCTTCGCCATGACCACTTCCAGCTATCACCACAGGG
AGACATTCACGAGGGCAAATCGTGTGTGTGTGTGTGTGTGTGCGTGCGTG
TGGTTTGCGTTGTGAGGTCCATTGGTTTGATCCGTGCGAGCGAGCGTTCG
AGACGGGATCAGCGTTAGAACGGTGTGACCGTTGCCGCATTCAGCATGTA
CCCCCCCCCCCAGTAGTATTGTTGGCAGCATTTTGGAGAACACTTTTTTG
TTCGCGTCACCACCACGCGACCGGCCTGTTCAGGCCCCTGCATTGTTCTA
TTGCAAGTTTCAATTTCGTCCGCTTTCTCTTTCACATTTTGTGTGTACAT
GATGTGTCTTGTCAGGGATGGGCACGCGCCGGTGGCAGCACCAGGGACGC
CGTTGCCGCCGCCGACATCAGCGGCGGCGGTGGCGGCGGCGGCGGCGGTC
CTTCCGCCGAATTGGTACAGAGCGGGACGAGGAGTGGATGACTTGCTGAG
CGAGGCGGAGGGGCTAGACTGGCTTGCCGACAGCGGAGGGGCCGCTCTGG
CGGTCACGTCGGCTGTGCCGTCCGCCGCCGCCGCCGCCGCCAGCGCCGCC
AGCGCCGCCGCAGCAGCAGCGGCAGCGACAGCCGTGACGGCAGCGGTGAC
GGCCGGTCTAAGCAGCATCACCACCACCACCAGCAACAACAGCAGCAGCA
ACAACAGCAGCTTGCAAGCGAGAGCCGCGCCTCCACCCGATCCGTCGAGT
CAGCCCCTGCTCAAGAAGGTTCGACCCTCGCCCGTGGCTTGTGCGATGAC
GCCGTCGACTTGGTCTCTGCCACCCCGGCCGTTTCCGCCTGCCACTGGTG
TGCCTCCACCGCCTGCGACGACGACGATGACGACGACGACGGTGGGAGCT
CCCGCCGCCAATGTCAACACCACCACCACCACCACTACTACTGCCGTGGC
CGGTTCTAACGGAAGCGTAGGTGCTTCTCCCTTGTTGGCGACGACGGCTG
CTGCTGCTTCTGTTCAACCATCGCAGTCGCCAACACCGGCTACGGTTGCG
GCTACGGCGGCAGCAGCGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGCC
GCCACAGCCGCCACAGCCGCATGCTGCTGGTGCTACCGATACCGTAGGAG
TAGCGGCAGCGGCAGTCGCGCCCCCGGCGAAGCCGCTCGCGGTTTGTTCT
GCCTCCAGCCTTCCTATTTCGTCGTCCTCGGCCGCTGCCGCCGCCGCCGC
TTCTCCCCTCTCTGGTGCTAGTCCTGCTGCAACTATACCCGCGGCAGTTG
TTGCTGTTCGCCCTGCGACTGCTGCCCCTCCTGCCCGTCCGGCTTCAGCT
TTTGATGCGGCTGTGGGTGGTGGTACCGGTGGCGCCGGTCCCAGCGGGTA
TGTGGTGACTACCGCTGCGGTTCCCAACGGGGCGTCTCACGGCCAACAAG
GAACGACAGCCCCAGCAGCAGAAATTGCTGCAGCTCCTCCTCCTGCTACT
GCTGCTGCTGCTGCTGCTGCTGCTCCTGCTCCCGTCGGAGCCGCCCCAGC
AGCCGCGAACGGGGTAGACCAGATTGTTCCACCGGCAGTGGCACCGGCCG
CGCTGGCGGCCGCGGAGGCGCAGGCGGATGTGGCGGAGGCGGGGCGAGGC
GTAGCAGCGATCGATATCGGCACGGCGGGTCCGGCGACCATGTCGATGAG
AGCTGCAACGGCAACAAGAACAACAAGAACAACAACAAGAACAACAATAG
CAACAACAAAAGCACTTTCGTTGACGCCATTGACGACAGCAACACCAGCA
GCAGCAACCCTGACAGCGACCGCGGCCGGTATCGGTGTTGGTGGTGTTGA
TGTAGACGTTACCGGCGTAGTCGTGGACGATTTTACGCCTTCGGGGCTGC
AGGGCTCGGACACAGAGGAGGGCCACCTGTCGGGGTTATCAGACTTGGAA
AGCCTCATGGATGACCAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig134:388928..394445+

>mRNA_P-littoralis_Contig134.67.4 ID=mRNA_P-littoralis_Contig134.67.4|Name=mRNA_P-littoralis_Contig134.67.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1353bp|location=Sequence derived from alignment at P-littoralis_Contig134:388928..394445+ (Pylaiella littoralis U1_48)
ATGACGGCCGCCGGCCGCAGTGTATGCACCGCCACGGGTGCCGCAACGGC
GCCAGCGGCGGCCCCGGGAGCGGCGGGGGGTGTTGCAGGGGCGCATCACC
ACCACCACCACCACCACCACCACCAGCCCCCGCCGGGCTATGTTCGGGCT
GGTGCCACGGGACAGGGCTCTATCGGGGCGGCCTCGGTGGGAGGAGCAGG
GCCGGGTGGCATGGCGATCGGGGCCACGGCGCCGGCGCCGGCGGGGGGCG
GCTTTCACGGCAGCAATGGCGGCGCGGAAGTGGAAGAGGGTGGGGCGGTT
AAAGAGAACACGGGGCGATGGACGTACGACGAGCACCGGCTGTTCCTGCG
AGGGCTGGAGCTCCACGGCAAGGGGTGGAAGAAGATCGCGTCGCTCATCA
GGACGAGGACGGTGGTGCAGATACGCACGCACGCCCAGAAGTACTTCCAG
AAGATAGCCAAGGCCAAGCAGAACGGGGACCACGGGGAGGTTGCCATGGA
CGCTAAGGGCAACGGCTTGCGAAGAAAAAGCAGGGGACGGAGACGAATGG
AAGACTTGCTGAGGGGTTCCACGGCGGTGGCGCCTTCTCTCCAGCCCTAC
GTGGCCGGGGCTGGGGCTGTCGAGACCGGCTTGTACCGCTTTCTGTCCCC
CATATCCATTGAGGATCTGGAGAGGCGGCCAGCCGCTGGGGCAGGCGGTG
TGGGCGAGGTGGGAGCGGGAACCGGTGGGAATGGTGCGGGTTCGCCTCTG
TCTCAGCTGGATGGGCACGCGCCGGTGGCAGCACCAGGGACGCCGTTGCC
GCCGCCGACATCAGCGGCGGCGGTGGCGGCGGCGGCGGCGGTCCTTCCGC
CGAATTGGTACAGAGCGGGACGAGGAGTGGATGACTTGCTGAGCGAGGCG
GAGGGGCTAGACTGGCTTGCCGACAGCGGAGGGGCCGCTCTGGCGGTCAC
GTCGGCTGTGCCGTCCGCCGCCGCCGCCGCCGCCAGCGCCGCCAGCGCCG
CCGCAGCAGCAGCGGCAGCGACAGCCGTGACGGCAGCGGTGACGGCCGGT
CTAAGCAGCATCACCACCACCACCAGCAACAACAGCAGCAGCAACAACAG
CAGCTTGCAAGCGAGAGCCGCGCCTCCACCCGATCCGTCGAGTCAGCCCC
TGCTCAAGAAGGTTCGACCCTCGCCCGTGGCTTGTGCGATGACGCCGTCG
ACTTGGTCTCTGCCACCCCGGCCGTTTCCGCCTGCCACTGACGTTACCGG
CGTAGTCGTGGACGATTTTACGCCTTCGGGGCTGCAGGGCTCGGACACAG
AGGAGGGCCACCTGTCGGGGTTATCAGACTTGGAAAGCCTCATGGATGAC
CAG
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