mRNA_P-littoralis_Contig134.44.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig134.44.3
Unique NamemRNA_P-littoralis_Contig134.44.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 1.140e-170
Identity = 314/495 (63.43%), Postives = 351/495 (70.91%), Query Frame = 1
Query:    1 HRGRRRVPPPATMAFEKRPEERALGDVLIPEDNTPGGVSSTTEDSDGGGGRVGISVEPPGFLKRLFSVPRNVRRTAATGDVVVPVIGARDGWGGIRQARIGSYDICFCPTHACRLANQGIYPGVEYRILDVSVFPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQADLDSEPTSVLSSARDAPDGAFDDGGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRDDIMFFTPPPVLRDVVSKAGGTLNAGDLFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAK--IKARVPVVLPDRVLQRITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ 1479
            H+ R+   P  TM FEKRPEERALGDVLIPED  PGG         GG   +G+SVEPPGFLKR+FS+P+NVRRTAA GDVVVPVIGARDGWGGIRQA                 +NQGIYPGVEYRIL++SVFPT                          XXXXXXXXXXXXXXXXXXX        Q DLD+EPT+VL+SARDAP  +FDDG LVFTMRPIYPLV RLER DWPVRV AREFPVMLTPFSYNAATAWAA TTSLSLL+VGFVLSQALTLSVI+SHSMEPTLQVGDVVLVEKVSRS LV+ +DI++F PPPVL+D+VS+AGGTL+  DLFVKRVA L GDTVT+SADG+VDVR   G G   R+    +                    +     AG+  +    A AK    A   V LPD VLQRITR+D+KVL +G+V VLGDNP+ASMDSRVWGQLD+ EIVGHALLRV PPRSFGLLQ
Sbjct:   74 HQRRQTRAPALTMLFEKRPEERALGDVLIPED-APGGAGEG-----GGDDAIGVSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQA-----------------SNQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXX--------QPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGIT-RLPKGTNRADNGGSAAGGESDVILGDGV-----AGQEGSAAAVAAAKGGTLAEEKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLLQ 531          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.480e-43
Identity = 127/286 (44.41%), Postives = 146/286 (51.05%), Query Frame = 1
Query:  601 LSSARDAPDGAFDDGGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRDDIMFFTPPPVLRDVVSKAGGT-LNAGDLFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPVVLPDRVLQRITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLP 1455
            L S  DAP  AF+ G L+  +RPIYPL+ RLER  WPV VAAR+ P+ LT F+YN ATAWAAL                LTLS I S SMEP L+ GDVVLVEKVSR +L+RR +++FF PPP LR  V+ AGG  L  GDLFVKRVA L GD V ++ DG   VR     GA  R    +             XXXXXXX                   A                            G+  VLGDNP  S+DSRVWG L    IVG  LLRV P
Sbjct:   20 LDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERA-WPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVR-----GALVRGAGDLPRAARSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXA----------------------------GSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFP 271          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC)

HSP 1 Score: 158 bits (400), Expect = 1.310e-38
Identity = 119/296 (40.20%), Postives = 143/296 (48.31%), Query Frame = 1
Query:  652 VFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVR---RDDIMFFTPPPVLRDVVSKAGGTLNAGDLFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPA--GETAAEGE-EAPAKIKARVPVVLPDRVLQRITR-----------------VDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFG 1470
            V T+RP Y LV +LER  WPV +A  E P+ LTP  YN AT  + L ++  LLAV  V SQ  +L  I S+SMEPTL  GDV+LVEKVSR  LVR     DI+ F PP  LR  V +AGG L  GDLFVKRVA   GD VT                                              +D   P   G T    E E P  I +  P    D  +QR+                    D+ VL +GAV VLGDNP  S+DSR+WG+L E EIVGH ++R+ P   FG
Sbjct:  160 VITVRPRYRLVDKLER-QWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSR--LVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVT----------------------------------------------VDNGLPTINGHTYVYPEPEEPPTIGSDAPPARADGSMQRLAIGRGFAWPYAGEAPSQWVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFG 406          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.190e-38
Identity = 103/282 (36.52%), Postives = 155/282 (54.96%), Query Frame = 1
Query:  646 GLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRD---DIMFFTPPPVLRDVVSKAGGTLNAGDLFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPVVLPDRVLQR-ITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ 1479
            G  + ++P+YPLV +LER  WPVRV  R+ P + TP  YN  +A+ +L T+ S L V F+LSQA++L  I S SM+PTL+VGDV+LV+KVS  +  R++   D++ F+PP  L+++V+K GG L++ DLFVKR+A  PGD VT+  DG VDV                                            G+    G     + +       P R++++ I   +DK+++   V V+GD  S S+DSRVWG L+ + IVG  ++R+ P   FG ++
Sbjct:  391 GADYELKPVYPLVAQLER-PWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDVN-------------------------------------------GQDVVAGRRDLCEAE-------PLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFGKVE 621          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC)

HSP 1 Score: 142 bits (358), Expect = 7.090e-32
Identity = 112/298 (37.58%), Postives = 149/298 (50.00%), Query Frame = 1
Query:  634 FDDGGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRD-----DIMFFTPPPVLRD-VVSKAGGTLNAGDLFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAK-IKARVPVVLPDRVLQRITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ*IFGVEGAL 1506
            +   G  + ++P+YPLV++LER  WPVRV  R+ P +LTP  YN  +A  +L T+L+ L V FVLSQA++L VI S SM PTL  GDVVLV+K++      R      D++FF PP  L+D VV   G  L   DLFVKRVA  PGD +T+   G+V V   G   A  R                                  ET    E  P + I+A +    PD       R+       G V VLGD  S S+DSRVWG L + +IVG  ++R+ PP  +G +  +     AL
Sbjct:  347 YSQPGADYELKPVYPLVRQLER-PWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVN--GATPAVAR----------------------------------ETC---EAEPLRLIEAYLKKASPDNPDGANVRIGP-----GQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWGPVPGLLHAPDAL 599          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO)

HSP 1 Score: 135 bits (340), Expect = 5.330e-30
Identity = 107/290 (36.90%), Postives = 148/290 (51.03%), Query Frame = 1
Query:  646 GLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVS-----RSSLVRRDD----IMFFTPPPVLRDVVSKAGGT-LNAGDLFVKRVAGLPGDTVTIS-ADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPVVLPDRVLQRITRVDDKV-LENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ 1479
            G+ + ++PIYPLV++LER  WPVRV  R+ P + TP  YN  +A  +L T+++ L   F++SQA+++ VI S SMEPTLQVGDV+LV+KV+     + +L + +D    I+ F P   L+D+V K+GG  L   +LFVKRVA  PG T+ I+ A G V+                                      ID   P       GEE             P R++++  R  D+  +    V VLGD  S S+DSRVWG L    IVG  LLRV P    G +Q
Sbjct:  261 GVDYELKPIYPLVQQLERL-WPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVE--------------------------------------IDGRKPLERRDFCGEE-------------PTRLIEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVGQIQ 498          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A7S3RCX6_EMIHU (Mitochondrial inner membrane protease subunit n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RCX6_EMIHU)

HSP 1 Score: 131 bits (329), Expect = 6.180e-30
Identity = 103/289 (35.64%), Postives = 143/289 (49.48%), Query Frame = 1
Query:  643 GGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRD--DIMFFTPPPVLRDVVSK----AGGTLNAGD-LFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPV---VLPDRVLQRITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ 1479
            GG+V ++RP Y LVK+LER+DWPV V     P   TP +YN   A  A   ++  LAVG +L+ ALTLSV+ S SM P +Q  DV+LV+KVS     R +  +++ F PP  LR++V +    AGG    G+ LF+KR+A   GD  +          PP                                  ++  FP G    +G    + + A  PV   V P R     +  DD      A +VLGDN + S+DSR WG L ++E+ G  LLRVLPP  FG+++
Sbjct:   85 GGVVVSVRPAYDLVKKLERSDWPVSVPFSLAPRWYTPRAYNTLVASFAALIAVGWLAVGALLASALTLSVVPSDSMLPAVQRRDVLLVDKVSPRLGWRPESGELVLFRPPDALREIVRRQSAVAGGGEGRGEALFLKRIAARGGDAAS----------PP---------------------------------EVEV-FPDGAATIDGRRIRSAVAADSPVARFVAPTR----FSLADD------AYVVLGDNEAVSVDSRCWGPLRQREVAGRPLLRVLPPGRFGVVK 319          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE)

HSP 1 Score: 129 bits (324), Expect = 6.890e-30
Identity = 100/300 (33.33%), Postives = 137/300 (45.67%), Query Frame = 1
Query:  580 DSEPTSVLSSARDAPDGAFDDGGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRD---DIMFFTPPPVLRDVVSKAGGTLNAGDLFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPVVLPDRVLQRITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFG 1470
            D+E   V  S    P G +D       ++PIYPLV +LER  WPV V   E P + T   YN  +A  +L T+   L V + LSQ ++L  I S SM+PTL VGDVV+VEKVS       +   D++ F PP  L+++V  +GG +   DLFVKRVA  P   VT+ +DG V +                                                   +E   + K  +    P  +++R        +++  V V+GD  S S+DSRVWG L  KEI+G  L RV P   FG
Sbjct:    5 DTEGNEVFGSV---PGGKYD-------LKPIYPLVDQLER-PWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLI---------------------------------------------------DEMELQEKRDMCSEEPLGLIERYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFG 242          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: R1E2Q1_EMIHU (Mitochondrial inner membrane protease subunit n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E2Q1_EMIHU)

HSP 1 Score: 134 bits (336), Expect = 2.990e-29
Identity = 110/316 (34.81%), Postives = 154/316 (48.73%), Query Frame = 1
Query:  643 GGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVRRD--DIMFFTPPPVLRDVVSK----AGGTLNAGD-LFVKRVAGLPGDTVTISADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPV---VLPDRVLQRITRVDDKVLENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ*IFGVEGALRE*DGVARDANGEPKGRS 1560
            GG+V ++RP Y LVK+LER+DWPV V     P   TP +YN   A  A   ++  LAVG +L+ ALTLSV+ S SM P +Q  DV+LV+KVS     R +  +++ F PP  LR++V +    AGG    G+ LF+KR+A   GD  +          PP                                  ++  FP G    +G    + + A  PV   V P R     +  DD      A +VLGDN + S+DSR WG L ++E+ G  LLRVLPP  FG+++ +F   G++      A  A+ E   RS
Sbjct:   69 GGVVVSVRPAYDLVKKLERSDWPVSVPFSLAPRWYTPRAYNTLVASFAALIAVGWLAVGALLASALTLSVVPSDSMLPAVQRRDVLLVDKVSPRLGWRPESGELVLFRPPDALREIVRRQSAAAGGGEGRGEALFLKRIAARGGDAAS----------PP---------------------------------EVEV-FPDGAATIDGRRIRSAVAADSPVARFVAPTR----FSLADD------AYVVLGDNEAVSVDSRCWGPLRQREVAGRPLLRVLPPGRFGVVKELF--RGSIPGMSLAAVSASTEASARS 328          
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO)

HSP 1 Score: 126 bits (317), Expect = 7.120e-28
Identity = 102/287 (35.54%), Postives = 144/287 (50.17%), Query Frame = 1
Query:  646 GLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAALTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVS-----RSSLVRRDD----IMFFTPPPVLRDVVSKAGGT-LNAGDLFVKRVAGLPGDTVTIS-ADGTVDVRPPGGVGAAGRMHSSISGGXXXXXXXXXXXXXXXXXSIDRNFPAGETAAEGEEAPAKIKARVPVVLPDRVLQRITRVDDKV-LENGAVLVLGDNPSASMDSRVWGQLDEKEIVGHALLRVLPPRSFG 1470
            G+ + ++PIYPLV++LER  WPVRV  ++ P + TP  YN  +A  +L T++  L   F++SQA+++ VI S SMEPTLQVGDV+LV+K++     + +L +  +    I+ F P   L+D+V ++GG  L   +LFVKRVA  PG T+ I+ A G V+                                      ID   P       GEE             P R++++  R  D+  +    V VLGD  S S+DSRVWG L    IVG  LLRV P    G
Sbjct:  129 GVDYELKPIYPLVQQLERL-WPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVE--------------------------------------IDGRKPLERRDFCGEE-------------PTRLIEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.44.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L442_9PHAE1.140e-17063.43Peptidase_S26 domain-containing protein n=2 Tax=Ec... [more]
A0A835YRZ1_9STRA5.480e-4344.41Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A0G4EFP7_VITBC1.310e-3840.20Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A448ZBV4_9STRA3.190e-3836.52Mitochondrial inner membrane protease subunit n=1 ... [more]
B7G479_PHATC7.090e-3237.58Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A1Z5JWA6_FISSO5.330e-3036.90Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S3RCX6_EMIHU6.180e-3035.64Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S1CZJ0_CYCTE6.890e-3033.33Mitochondrial inner membrane protease subunit n=1 ... [more]
R1E2Q1_EMIHU2.990e-2934.81Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A1Z5KRR1_FISSO7.120e-2835.54Mitochondrial inner membrane protease subunit n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig134contigP-littoralis_Contig134:252771..256629 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKT2
PFAMsPeptidase_S24
Model size2251
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.72e-134
EggNOG OGs2CZ78@1|root,2S8VM@2759|Eukaryota
DescriptionPeptidase S24-like
Cds size1446
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig134.44.3prot_P-littoralis_Contig134.44.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig134 252807..255802 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789616.3000965-UTR-P-littoralis_Contig134:252770..2528061680789616.3000965-UTR-P-littoralis_Contig134:252770..252806Pylaiella littoralis U1_48UTRP-littoralis_Contig134 252771..252806 +
1680789616.3493588-UTR-P-littoralis_Contig134:255802..2562171680789616.3493588-UTR-P-littoralis_Contig134:255802..256217Pylaiella littoralis U1_48UTRP-littoralis_Contig134 255803..256217 +
1680789616.3654-UTR-P-littoralis_Contig134:256275..2566291680789616.3654-UTR-P-littoralis_Contig134:256275..256629Pylaiella littoralis U1_48UTRP-littoralis_Contig134 256276..256629 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789616.3107774-CDS-P-littoralis_Contig134:252806..2528211680789616.3107774-CDS-P-littoralis_Contig134:252806..252821Pylaiella littoralis U1_48CDSP-littoralis_Contig134 252807..252821 +
1680789616.3217895-CDS-P-littoralis_Contig134:253474..2537621680789616.3217895-CDS-P-littoralis_Contig134:253474..253762Pylaiella littoralis U1_48CDSP-littoralis_Contig134 253475..253762 +
1680789616.330232-CDS-P-littoralis_Contig134:254062..2546081680789616.330232-CDS-P-littoralis_Contig134:254062..254608Pylaiella littoralis U1_48CDSP-littoralis_Contig134 254063..254608 +
1680789616.338633-CDS-P-littoralis_Contig134:255205..2558021680789616.338633-CDS-P-littoralis_Contig134:255205..255802Pylaiella littoralis U1_48CDSP-littoralis_Contig134 255206..255802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig134.44.3

>prot_P-littoralis_Contig134.44.3 ID=prot_P-littoralis_Contig134.44.3|Name=mRNA_P-littoralis_Contig134.44.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=482bp
MAFEKRPEERALGDVLIPEDNTPGGVSSTTEDSDGGGGRVGISVEPPGFL
KRLFSVPRNVRRTAATGDVVVPVIGARDGWGGIRQARIGSYDICFCPTHA
CRLANQGIYPGVEYRILDVSVFPTTTSSEPPAAAMGDTVVSSGGTSSEPE
LATPSSSFSSSSSSSSQQQQQQQQQQQQADLDSEPTSVLSSARDAPDGAF
DDGGLVFTMRPIYPLVKRLERTDWPVRVAAREFPVMLTPFSYNAATAWAA
LTTSLSLLAVGFVLSQALTLSVISSHSMEPTLQVGDVVLVEKVSRSSLVR
RDDIMFFTPPPVLRDVVSKAGGTLNAGDLFVKRVAGLPGDTVTISADGTV
DVRPPGGVGAAGRMHSSISGGSSGSSGSSSSSSSSSSSSIDRNFPAGETA
AEGEEAPAKIKARVPVVLPDRVLQRITRVDDKVLENGAVLVLGDNPSASM
DSRVWGQLDEKEIVGHALLRVLPPRSFGLLQ*
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mRNA from alignment at P-littoralis_Contig134:252771..256629+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig134.44.3 ID=mRNA_P-littoralis_Contig134.44.3|Name=mRNA_P-littoralis_Contig134.44.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=3859bp|location=Sequence derived from alignment at P-littoralis_Contig134:252771..256629+ (Pylaiella littoralis U1_48)
CACCGAGGACGAAGGAGGGTGCCGCCACCAGCAACGATGGCGTTCGAAAA AGTGCGATCGTTTTCACCTGTATGTGTATGATTGTTACTCTCTGTCGGCA ACAGTAGGAACGCTGTACAGATTCGGCCACAAACTTCGAGCAAGAAACCC TCATATTTTCTCTGAGCCCTGTTCATGTTTAGGCGTTTGGGGTGCTTTCG GCATTGCCGGCAGGTCATGTGGTAGGCTTGTTTGGCCGAATTACAAGTGT CCATTTGTTGTGCTCTCCTCTGGAGAGTATGTATGCGCGACGCTCCCTTT TTGTGCAGTATAATATACCCTCTGCGTGCTCGTTCATATTAACAGCGGCT TTCGCTCGACAAAGCTTCGTTCTCTATGTAAGTAGTGCACTGATGCTCTT CTTTCAAGGGGAAGCAAATTCGCATTATGATAAAGGGATTATCTACACAC CGCTTAATGTTCTACCCGCCATAACGTACGATATGTGTTGCTCATGCTTT TTTGTTCTCCAGTGTCGGGCCTTCCTTCTATGCATCCCCGGCTGGTGCGC CATGACTTTTACGGGAGTGCGCCGACTGGAATCGGGAACAAACAGTGTGG CAACACACACAAAGGCTGGTGTACATTTGCGAAGCATACACAGCAGTATA CATAATACTCGATTGTACTGATGATTCACTGATTTGCTTGTTGCACGTGT GCAGAGACCCGAAGAGCGGGCCCTGGGGGACGTTCTGATACCAGAGGATA ATACCCCGGGTGGTGTGTCGTCGACAACCGAGGACTCCGACGGTGGCGGC GGTCGCGTTGGAATATCCGTTGAGCCCCCGGGTTTCCTCAAGAGACTGTT CTCCGTTCCGAGGAACGTTCGGCGAACGGCGGCCACCGGCGATGTTGTCG TGCCTGTGATTGGTGCCCGGGACGGCTGGGGAGGAATAAGGCAGGCAAGG ATTGGGTCTTATGATATTTGCTTCTGTCCTACGCATGCATGCGTGCAGAT TAGCCCAGACCAGAAAACAGCCGGGGTGGTTTTGGAATGCCAGATACTTC GATGCCACCACTGCTGTGAGTGGTCGACAGTCGCAATGTTGCCGCGCGGT CGTCTTGTTCTCACGGCATTACGGTATTTCTGCCATGCTTTCTTCGTTAA GGGGAGATGAGCCGTCTGACAAACATCTAGCAGTTTTTCGCCCGTGTAGT CGCCCCTCCCCTCCGCCGCCCGTGCCCCCCTACAACTGACCCCACTTGTT CGCCTGTTGCACGTGCGCACCCCCATGCCGTCCCTTTTCCAGCGCCTCGC GAACCAAGGCATTTACCCTGGCGTGGAGTACCGCATCCTCGACGTATCAG TTTTCCCCACCACGACGTCCTCCGAGCCACCCGCCGCCGCCATGGGTGAC ACCGTTGTTTCTAGTGGTGGAACAAGTAGCGAGCCTGAGCTTGCAACACC TTCTTCGTCCTTTTCTTCTTCTTCTTCTTCTTCTTCCCAGCAGCAGCAGC AGCAGCAACAGCAGCAACAGCAGGCAGATCTCGACTCCGAACCCACGTCC GTGCTATCTTCGGCCAGAGACGCGCCGGACGGAGCGTTCGATGACGGCGG CCTGGTCTTCACGATGCGCCCCATCTACCCGCTCGTCAAGCGCCTGGAGC GCACAGACTGGCCGGTGCGCGTCGCGGCGCGCGAGTTCCCCGTGATGCTC ACGCCCTTCTCGTACAACGCAGCCACGGCTTGGGCCGCGTTGACCACGTC TCTGTCGCTGCTCGCGGTGGGGTTCGTCCTGAGCCAGGCCCTGACGCTGT CGGTCATCAGCAGTCACAGTATGGAGCCGACGCTGCAGGTGGGTGGGTAG GCATTGGAAGGTGTGGGGTTGATTGGATTGGTGGGCGTAGTTCTTGACGT TTGGTGCGCGGGGAATGCGGGGGGAGTTGGGGTTGAATGGGATCGACATA TCACACACCGTTCATCGTTTGATTTTCTGCTTGATCGTATGTTTTTGCAC GGTGGATACTACAGCGCGTGCTACTACTGGCAGTGTTCATTTTTGGCCAC CCCCACGCCTACTGTATGCCTGAATCGCACAATCAATTGCTTTTTCGATC TACAATCACGAACAAGCATGATAACGATAGCCTCTGTTCCCGAAAAATCA AACAAACATGCACACACACCAAAACAAATCTCGATCACAGCATTATCCCT TTATCCCGAAAAAAGGGGAGGAAAAAAAAGGGAAAGAGCGCACATGCGCT CACATTCTGGAACGGTTTCCGTGCCTGGCGTTTGGCCACGGGTGGGGTTT TAGCGATGGCCTACTCTGGTAGTGTGAGAGTTAACCTCACAACCAACAGC AACAGCAGCAATAACAACGATAGCAGCAGCAGCAGTAACAACAACAACAA CAACAACAACAACAACAACAACGACAATGACACAGGTCGGCGACGTGGTC CTTGTGGAGAAGGTGTCGAGGTCGTCCCTCGTGCGGCGCGACGACATCAT GTTCTTCACCCCGCCTCCCGTGCTCAGGGATGTCGTGTCCAAGGCAGGAG GGACGCTCAACGCCGGCGACTTGTTTGTCAAGCGCGTGGCCGGCCTTCCC GGGGACACGGTGACCATCAGCGCCGATGGAACAGTGGACGTCCGGCCACC AGGGGGTGTAGGAGCAGCAGGGAGGATGCACAGCAGCATCAGTGGCGGCA GCAGCGGCAGTAGCGGCAGCAGCAGTAGCAGTAGTAGCAGTAGCAGTAGC AGTATTGACAGAAATTTTCCTGCGGGGGAGACGGCGGCGGAAGGTGAGGA GGCGCCAGCGAAGATTAAGGCGCGAGTACCGGTGGTCCTCCCGGACAGGG TGCTGCAGCGAATAACCCGGGTCGACGACAAGGTTTTGGAAAATGGGGCC GTGCTTGTCCTCGGGGATAATCCGTCGGCATCGATGGACTCGAGAGTGTG GGGGCAGCTCGACGAAAAGGAGATCGTGGGGCACGCGCTGCTCAGAGTCC TGCCGCCGCGGTCTTTTGGGCTGCTGCAGTAAATTTTTGGGGTTGAGGGT GCTCTAAGGGAGTAAGACGGGGTAGCGAGAGATGCCAACGGCGAACCAAA GGGCCGATCAATCCTATCGGTGTTTTCTGTATTTTTTTGGTGTAGTTCAA CTCTACTTTTTCGTGTTTCGTGTTCCTGCCGCTGCCCGTGTGCTTCACGC CGGCACTTTGGCGAGAGGGGCGGTTTGGCAGGACGGGGAGACGAGGGGGA GACGGGGGGAGGCAGGATAGCTACAAAAACCTATTTGACGCAGCGGCAGT ACACCTTCGAAGTGTTCTGTTAGCTTCACGATTTGTCCTTTTTTTTTCTC ACCTACCCCTCTCACTCCTCTAGGCCGGAGTAGCTTGAACCCGAAACCTC GGGTACGCTCCTCCTGTAGAGTATTTGCTGTAGCGTATTTAGTTACAGTT GGGAACGCTAGTTGTCTGCGGCCATCCAACTGCCGGGAGAAACAGACTGT CGGAGAGAGGGGGGAGGTGGGCGCTTCTCAGACGGATCGAGCTACATACG GGGTGTGAGTAGATATTTCATGTAACCAGGTCTTCTTGAAGAAGAGTCTT TAGCTCCAATCTAGTCTAAGCGTGGGTATTGTTTTTGGAGCGCGTCCGGA CGTGAAGCAAGGTTTGTATACAAGGCAATAGGAGTGGAGATTATGTTGAG ATGATGGGATTTTTCTGAAAATGGACGGTATTTTTTTTGTCTCCAAAGGC TGTTTGCTTAGGTTTTTTCACGCTCTGTTGACGGGCGTCTCGCTGTCCTT GATGGCGTACGTGCTTTACACATAATAAATGCGTTTGCATGTGAACAAAG AAGGGTGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig134:252771..256629+

>mRNA_P-littoralis_Contig134.44.3 ID=mRNA_P-littoralis_Contig134.44.3|Name=mRNA_P-littoralis_Contig134.44.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1446bp|location=Sequence derived from alignment at P-littoralis_Contig134:252771..256629+ (Pylaiella littoralis U1_48)
ATGGCGTTCGAAAAAAGACCCGAAGAGCGGGCCCTGGGGGACGTTCTGAT
ACCAGAGGATAATACCCCGGGTGGTGTGTCGTCGACAACCGAGGACTCCG
ACGGTGGCGGCGGTCGCGTTGGAATATCCGTTGAGCCCCCGGGTTTCCTC
AAGAGACTGTTCTCCGTTCCGAGGAACGTTCGGCGAACGGCGGCCACCGG
CGATGTTGTCGTGCCTGTGATTGGTGCCCGGGACGGCTGGGGAGGAATAA
GGCAGGCAAGGATTGGGTCTTATGATATTTGCTTCTGTCCTACGCATGCA
TGCCGCCTCGCGAACCAAGGCATTTACCCTGGCGTGGAGTACCGCATCCT
CGACGTATCAGTTTTCCCCACCACGACGTCCTCCGAGCCACCCGCCGCCG
CCATGGGTGACACCGTTGTTTCTAGTGGTGGAACAAGTAGCGAGCCTGAG
CTTGCAACACCTTCTTCGTCCTTTTCTTCTTCTTCTTCTTCTTCTTCCCA
GCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGGCAGATCTCGACTCCG
AACCCACGTCCGTGCTATCTTCGGCCAGAGACGCGCCGGACGGAGCGTTC
GATGACGGCGGCCTGGTCTTCACGATGCGCCCCATCTACCCGCTCGTCAA
GCGCCTGGAGCGCACAGACTGGCCGGTGCGCGTCGCGGCGCGCGAGTTCC
CCGTGATGCTCACGCCCTTCTCGTACAACGCAGCCACGGCTTGGGCCGCG
TTGACCACGTCTCTGTCGCTGCTCGCGGTGGGGTTCGTCCTGAGCCAGGC
CCTGACGCTGTCGGTCATCAGCAGTCACAGTATGGAGCCGACGCTGCAGG
TCGGCGACGTGGTCCTTGTGGAGAAGGTGTCGAGGTCGTCCCTCGTGCGG
CGCGACGACATCATGTTCTTCACCCCGCCTCCCGTGCTCAGGGATGTCGT
GTCCAAGGCAGGAGGGACGCTCAACGCCGGCGACTTGTTTGTCAAGCGCG
TGGCCGGCCTTCCCGGGGACACGGTGACCATCAGCGCCGATGGAACAGTG
GACGTCCGGCCACCAGGGGGTGTAGGAGCAGCAGGGAGGATGCACAGCAG
CATCAGTGGCGGCAGCAGCGGCAGTAGCGGCAGCAGCAGTAGCAGTAGTA
GCAGTAGCAGTAGCAGTATTGACAGAAATTTTCCTGCGGGGGAGACGGCG
GCGGAAGGTGAGGAGGCGCCAGCGAAGATTAAGGCGCGAGTACCGGTGGT
CCTCCCGGACAGGGTGCTGCAGCGAATAACCCGGGTCGACGACAAGGTTT
TGGAAAATGGGGCCGTGCTTGTCCTCGGGGATAATCCGTCGGCATCGATG
GACTCGAGAGTGTGGGGGCAGCTCGACGAAAAGGAGATCGTGGGGCACGC
GCTGCTCAGAGTCCTGCCGCCGCGGTCTTTTGGGCTGCTGCAGTAA
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