prot_P-littoralis_Contig1002.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1002.7.1
Unique Nameprot_P-littoralis_Contig1002.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length90
Homology
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BLAST of mRNA_P-littoralis_Contig1002.7.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.240e-19
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0 
Query:    2 FERRGYKVTVVFDGATPPAKQDTSQGRMKRREESASAARRLAVQGGASASEVNRMASASCVFDSRMNARLARRLRDLIQGEVYMAPGEA 90
            FE RG+KVTVV DG+TPPAK+ TS+ R  +RE +AS AR L   GG   +E+N+ AS +CVFDSR+ AR+A  LR  I GEVY+AP EA
Sbjct:   70 FESRGFKVTVVLDGSTPPAKKSTSEARRTKREAAASEARELQRTGGR-LTEINKKASNACVFDSRVVARVATLLRPQIAGEVYIAPREA 157
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1002.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFX7_9PHAE1.240e-1958.43Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..90
e-value: 5.7E-11
score: 44.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..43
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1002contigP-littoralis_Contig1002:6497..6766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1002.7.1mRNA_P-littoralis_Contig1002.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1002 6485..6766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1002.7.1 ID=prot_P-littoralis_Contig1002.7.1|Name=mRNA_P-littoralis_Contig1002.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=90bp
MFERRGYKVTVVFDGATPPAKQDTSQGRMKRREESASAARRLAVQGGASA
SEVNRMASASCVFDSRMNARLARRLRDLIQGEVYMAPGEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf