prot_P-littoralis_Contig1338.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1338.4.1
Unique Nameprot_P-littoralis_Contig1338.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length133
Homology
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 4.860e-55
Identity = 97/131 (74.05%), Postives = 107/131 (81.68%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ IVS SS E+EYIA GEGV+ ALFVR VLSFIAPETSGS+ + LEDN+GA+AL+QNPLS GR+KHIDVRFHFIR LFRS  ISV  V T EQHA VLTKALSR   +YHR+ LMNLPE
Sbjct:  102 VGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYHRRKLMNLPE 232          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KVG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.440e-54
Identity = 90/131 (68.70%), Postives = 107/131 (81.68%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            +GG  VSH S +Q +V+ S+ E+EYIAAGEGV+EALFVR VLSF+APETS ++ +  EDN+GAM L+QNPLS  RSKHIDVRFHFIRELF+S  ISVE+V T+EQHA +LTKAL R    YHRKALMNLPE
Sbjct:    8 LGGTAVSHTSKSQRVVALSTTEAEYIAAGEGVKEALFVRAVLSFVAPETSWASIQVREDNQGAMTLVQNPLSSARSKHIDVRFHFIRELFKSGRISVEYVSTDEQHADLLTKALCRVKLEYHRKALMNLPE 138          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 1.010e-53
Identity = 95/131 (72.52%), Postives = 108/131 (82.44%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SH S TQ IVS SS E+EYIAAGEGV+EALFVR VLSFIAPETSGS+ + LEDN+GAMAL+QNPLS  RSKHIDVR+HFIR LFRS  IS++ V T EQHA VLTKA S+   +YHR+ LMNLPE
Sbjct:  251 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKAHSKSSLQYHRRKLMNLPE 381          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 2.060e-53
Identity = 92/131 (70.23%), Postives = 109/131 (83.21%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ IVS SS E+EYIAAGEGV+EALFVR VLSF+APETSGS+ + LEDN+GA+AL+QNPLS GR+KHIDVR+HFIR LF S  I+V+ V T+EQHA +LTKALSR   +YHR+ L+N PE
Sbjct:   97 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFGSGDIAVKFVPTKEQHADLLTKALSRASLQYHRRKLINFPE 227          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.480e-53
Identity = 88/130 (67.69%), Postives = 104/130 (80.00%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLP 131
            VGG VV   + TQP+ + S+ E+EYIAAGEGV+EALFVR VLSFIAPETSG+T +  EDNEGA+AL+QNP S  RSKHIDVRFHFIRELF++  I+ ++V TEEQHA +LTK L R    YHRKALMNLP
Sbjct:   82 VGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLP 211          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 3.190e-53
Identity = 95/131 (72.52%), Postives = 109/131 (83.21%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ I+S SS E+EYIAAGEGV+EALFVR VLSF+APETSGS+ K LEDN+GA+AL+QNPLS GR+KHIDVR+HFI  LFRS  ISV+ V T EQHA +LTKALSR   +YHR+ LMNLPE
Sbjct:  256 VGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKALSRANLQYHRRKLMNLPE 386          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 2.490e-52
Identity = 95/131 (72.52%), Postives = 109/131 (83.21%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SH S TQ IVS SS E+EYIAAGEGV+EALFVR VLSFIAPETSGS+ + LEDN+GAMAL+QNPLS  RSKHIDVR+HFIR LFRS  IS++ V T EQHA +LTKALS+   +YHR+ LMNLPE
Sbjct:  466 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 596          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KUQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ2_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 3.430e-52
Identity = 92/127 (72.44%), Postives = 104/127 (81.89%), Query Frame = 0
Query:    6 VVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VVSH S TQ IVS SS  +EYIAAGEGV+EALFVR VLSF+APET GS+ + LEDN+GAMAL+QNPL+ GR+KHIDVRFHFIR LFRS  ISV+ V T EQHA +LTKALSR   +YHR  LMNLPE
Sbjct:   92 VVSHGSKTQSIVSLSSTVAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAMALVQNPLNSGRTKHIDVRFHFIRGLFRSGEISVKFVPTTEQHADLLTKALSRASLQYHRPKLMNLPE 218          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 3.500e-52
Identity = 92/130 (70.77%), Postives = 107/130 (82.31%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLP 131
            VGG VVSH S TQ IVS S++E+EYIAAGEGV+EALFVR VLSFIAPETSG+  K LEDN+GA++L+QNP S  RSKHIDVRFHFIRELF+S  ISVE++ T+EQHA +LTKAL R     HR ALMN+P
Sbjct:  241 VGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNIP 370          
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.020e-51
Identity = 97/131 (74.05%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    2 VGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPETSGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEHVRTEEQHAGVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSH S TQ IVS SS E+EYIAAGEGV+EALFVR VLSF+APETSGS+ K LEDN+GA+AL+QNPLS GR+KHIDVR+HFIR LFRS  ISV+ V T EQHA +LTKALSR   +YHR+ LMNLPE
Sbjct: 1116 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1338.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJM0_9PHAE4.860e-5574.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVG7_9PHAE2.440e-5468.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L589_9PHAE1.010e-5372.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE2.060e-5370.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR64_9PHAE2.480e-5367.69Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGI0_9PHAE3.190e-5372.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGX6_9PHAE2.490e-5272.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUQ2_9PHAE3.430e-5272.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9K6_9PHAE3.500e-5270.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KSG8_9PHAE3.020e-5174.05Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 60..127
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 60..127
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..118
e-value: 7.75873E-41
score: 131.051

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1338contigP-littoralis_Contig1338:25259..25657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1338.4.1mRNA_P-littoralis_Contig1338.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1338 25195..25693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1338.4.1 ID=prot_P-littoralis_Contig1338.4.1|Name=mRNA_P-littoralis_Contig1338.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp
MVGGAVVSHKSSTQPIVSNSSAESEYIAAGEGVREALFVRHVLSFIAPET
SGSTTKALEDNEGAMALIQNPLSCGRSKHIDVRFHFIRELFRSWAISVEH
VRTEEQHAGVLTKALSRDLFRYHRKALMNLPE*
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