mRNA_P-littoralis_Contig1336.4.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1336.4.1
Unique NamemRNA_P-littoralis_Contig1336.4.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 7.260e-75
Identity = 142/309 (45.95%), Postives = 173/309 (55.99%), Query Frame = 1
Query:  283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H V                                                                                        R+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P ANW+  SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAERRA+AKREG RL+  NR G K+ KK  R QSVA+AT  A+ +A+  + PLL
Sbjct:   39 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNV----------------------------------------------------------------------------------------RKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLL 258          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.840e-74
Identity = 145/309 (46.93%), Postives = 173/309 (55.99%), Query Frame = 1
Query:  283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+E+W   + RF DPDH+V                                                                                        R+IVD E V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+A+W+  SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDDGTG      GGA+RRA+AKREG RLH  NR GKK+  K    QSVA+AT  A+ +AI  M PLL
Sbjct:  176 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQV----------------------------------------------------------------------------------------RKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 4.930e-71
Identity = 163/366 (44.54%), Postives = 198/366 (54.10%), Query Frame = 1
Query:  112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            G +Y+VADL+  M+ E+  E     GG             XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H V                                                                                        R+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW+  SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN  LP D QREDDGTG   G  GGAERRASAKREG RL   NR G K+ KK    Q+VA+AT  A+ +A+  + PLL
Sbjct:  147 GVDYSVADLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHV----------------------------------------------------------------------------------------RKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLL 416          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 2.390e-69
Identity = 139/309 (44.98%), Postives = 171/309 (55.34%), Query Frame = 1
Query:  283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            ERKGPHCMMRLVG+L ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H V                                                                                        R  VD E+V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW+  SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAER A+AKREG RL+  NR G  + KK  R QSVA+AT  A+ +A+  + PLL
Sbjct:  203 ERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNV----------------------------------------------------------------------------------------RISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLL 422          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 6.720e-69
Identity = 141/309 (45.63%), Postives = 172/309 (55.66%), Query Frame = 1
Query:  283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+++W   + RF DPDH+V                                                                                        R+IVD + V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+ANW+  SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDDGTG      GGA+RRA+AKREG RL+  NR GKK   K    QSVA+AT  A+ +A+  + PLL
Sbjct:  411 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQV----------------------------------------------------------------------------------------RKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLL 630          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.210e-68
Identity = 162/366 (44.26%), Postives = 196/366 (53.55%), Query Frame = 1
Query:  112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            G +Y+V DL+  M+ E+  E     GG             XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H V                                                                                        R+IVD E V+H +PN+I QPNISAEK++KMW+  KAKWN P+ANW+  SGNNQPW++F QGD+D +++G AI+KYPELDQVCN  LP D QREDDGTG   G  GGAERRASAKREG RL   NR G K+ KK    QSVA+AT  A+ +A+  + PLL
Sbjct:  309 GMDYSVTDLYDAMEKENTPELEDSAGGXXXXX-------XXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHV----------------------------------------------------------------------------------------RKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 7.860e-68
Identity = 131/279 (46.95%), Postives = 154/279 (55.20%), Query Frame = 1
Query:  283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 1119
            ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R  LD S+VG R+E+W   + RF DPDH+V                                                                                        R+IVD E V+H DPN+I QPNISAEKLS+MWA  KAKWNQP+ANW+  SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE  QREDD TG      GGA+RRA+AKREG RLH  NR GKK
Sbjct:  299 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQV----------------------------------------------------------------------------------------RKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 4.210e-61
Identity = 132/299 (44.15%), Postives = 163/299 (54.52%), Query Frame = 1
Query:  283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGT-SGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 1176
            ERKGPHCMMRL GIL ED +RP +I+SRLQA R +LD SAVG R  +W   ++RF DP H V                                                                                        R+IVD E  +H +PN+I QP+I AEK++K W+  KAKWN P+ANW+ + SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG   G  GGAERRA+AKREG RL+  NR G K+ K+  R QSVA+AT  A+
Sbjct:  733 ERKGPHCMMRLEGILCEDSIRPRVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHNV----------------------------------------------------------------------------------------RKIVDDEQASHVNPNIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 6.160e-57
Identity = 146/366 (39.89%), Postives = 181/366 (49.45%), Query Frame = 1
Query:  112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            G +Y+VADL+  M+ ED  E         +S         XXXXXXXXXXXX     ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R  +W   ++RF DP H V                                                                                        R+IVD E V+H   N+I QPNISAEK++ M +  KAKWN P+ANW+   GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG   G                  +  NR G K+ KK  R QSVA+AT  A+ +A+  + PLL
Sbjct:   23 GVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNV----------------------------------------------------------------------------------------RKIVDDEQVSHVIANIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLL 278          
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 5.510e-53
Identity = 147/364 (40.38%), Postives = 183/364 (50.27%), Query Frame = 1
Query:  118 EYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPVEGEHPLRR**RWHEYVMCQLVLLRCTQ*AVCIHCFVFITAVPGAGLTPVGHRHPDSCSTDTREISPAPCT*YLSLFNRSLPTLKVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 1209
            +Y+VA+LF  M+ ED  E     GGS+ +G  GS    XXXXXXXXXXXX     ERKGPH MMRLVGI  ED + PL I+SR+QA R +LD SAV  R+ +W   ++RF D  H V                                                                                        R+IVD   V+H +PN+I QPN SAEK++  W+  +A WN P+ANW   SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG      GGAERR +AKREG RL   N             +SVA+A   A+ +A+  + PLL
Sbjct:  282 DYSVANLFDAME-EDKPELGDSAGGSAPNG--GSSXXXXXXXXXXXXXXXSGSITERKGPHWMMRLVGIPCEDSIHPLAINSRMQATRQELDTSAVWPRNNLWTEVTDRFRDRGHNV----------------------------------------------------------------------------------------RKIVDDGQVSHVNPNIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLL 553          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1336.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXZ6_9PHAE7.260e-7545.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ39_ECTSI1.840e-7446.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZX9_9PHAE4.930e-7144.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNY9_9PHAE2.390e-6944.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKV3_9PHAE6.720e-6945.63Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KFU0_9PHAE1.210e-6844.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU69_ECTSI7.860e-6846.95Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KNM0_9PHAE4.210e-6144.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ52_9PHAE6.160e-5739.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN7_9PHAE5.510e-5340.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1336contigP-littoralis_Contig1336:9036..11387 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FIC6
Model size1317
Max annot lvl2880.D7FIC6|-
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.65e-55
EggNOG OGs2EJXG@1|root,2SPZB@2759|Eukaryota
Cds size564
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789614.2371023-CDS-P-littoralis_Contig1336:9035..94391680789614.2371023-CDS-P-littoralis_Contig1336:9035..9439Pylaiella littoralis U1_48CDSP-littoralis_Contig1336 9036..9439 -
1680789614.247611-CDS-P-littoralis_Contig1336:10474..106341680789614.247611-CDS-P-littoralis_Contig1336:10474..10634Pylaiella littoralis U1_48CDSP-littoralis_Contig1336 10475..10634 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789614.259678-UTR-P-littoralis_Contig1336:10634..113871680789614.259678-UTR-P-littoralis_Contig1336:10634..11387Pylaiella littoralis U1_48UTRP-littoralis_Contig1336 10635..11387 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1336.4.1prot_P-littoralis_Contig1336.4.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1336 9036..10634 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1336.4.1

>prot_P-littoralis_Contig1336.4.1 ID=prot_P-littoralis_Contig1336.4.1|Name=mRNA_P-littoralis_Contig1336.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=188bp
MVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVN
FCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGA
ERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAP
LLASMKPDTANGRPQTDDPERQVAEIVLADECMTAHEN
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mRNA from alignment at P-littoralis_Contig1336:9036..11387-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1336.4.1 ID=mRNA_P-littoralis_Contig1336.4.1|Name=mRNA_P-littoralis_Contig1336.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2352bp|location=Sequence derived from alignment at P-littoralis_Contig1336:9036..11387- (Pylaiella littoralis U1_48)
CCCGCAAGAACTCCACGGACGAGGCAATCCCCGCCGAGGTAGTTCTCGCG CTCCGGGCCACGTTGACGCTGGTTCGCGTCGACCGCAACTCGAGTACGCC CTTCAAGTTCGGGCCGAGAGTACAACGTAGCCGACCTCTTCGCCATCATG GACGCCGAAGACGCCGTCGAGGCTGCGGCAGAGGGCGGAGGAAGTTCCGA GAGTGGTGCCACCGGGTCGTGCGGCGGCACTGCTGCGGGGGCGGGGGGTG GCGGCGCCGCTGGAGCGGGGGTTGGCACCGCGGAGCGGAAAGGGCCGCAC TGCATGATGCGGCTCGTCGGCATTCTCGTAGAGGACGACGTTCGCCCGCT GCTCATAGACAGTCGGCTTCAGGCGAATCGTGCTCAGCTTGATGCCTCTG CGGTGGGATCACGCAGCGAAGTGTGGCAAGTCGCCTCGGAACGCTTCACG GACCCTGACCACGAGGTAACACCAGTGGAGGGGGAACACCCCCTCCGCCG GTAGTGACGATGGCATGAATATGTGATGTGCCAACTTGTTTTATTGCGCT GCACCCAGTAAGCCGTGTGTATACATTGTTTTGTTTTCATCACAGCGGTT CCAGGGGCAGGTCTGACCCCGGTTGGTCATCGGCACCCAGATTCGTGTAG CACAGACACACGCGAAATTTCGCCCGCACCATGTACCTGATACCTCTCCC TCTTCAACCGATCGCTCCCGACTCTTAAGGTGCGACGGATCGTCGACCAC GAGATGGTCGCCCACTGCGATCCCAACGTAATCCACCAACCGAACATTTC CGCGGAAAAGCTCTCCAAAATGTGGGCGGGGGTGAAGGCGAAGTGGAATC AGCCCCACGCAAACTGGAGGGGCACGTCTGGCAACAATCAGCCTTGGGTG AACTTCTGCCAAGGTAAGAATGCCGTTCGAGAGTGGGAGGGAAACTCACA TGCGTAGATTAAACGTTGTAAAGGGGCCTTCGGCATAAACTGTTCAGCGT GTCAATTTTCTTGTCGGCCGTAGGCGAGACGCTGCCTTACCGGTCTTGTT TAGGTGATTCGATTCTGCACCGGTTCGTTTGTGTTTCTCATTTCACCTTG TACTTCGGGTGCAAGGGAACAAGTTGGGCTCACCATCCGGGTTTAGACGA TCGTCAGGTCAACAAACGTTTTTTTGCAAGGGTGTACATAGACTGCTGCC GGGCCGATTGTTCCCGGATTTTGACGGAAGTGCTGGTGATTTCGGCCCGT CCCGGCAAAAACATAAAAATAACCGGCCCGTCCCGGCCCCCGGAAAGAAA ATAAAAAAACATTATACCCGCCCGTCCCGGCACATGAGGAAAAAAAAAAC GGCCCGGCCCGGCGCGTGAAAAAAAACCTCCATTCCCGGCACGTGAAAAA AACGTCCGCCCGGCCCGGCAAGTGGACACAAAATTATCGCTCTATCCCGG CCATGTGAATACAAAAACTACAGAATACTCGCGGTAAAGGCACAATGCAA AAAACAACAATTTGCGTGCGATTGGTCACACCCTCGTCGTATCCAGTATA CACTCCGCAAATGTCCCGGTGCTGAAAATGAAAACTACCGGCCCGTCCCG GCACGTGAAAGCAAAAACTACTGGCTCGTCCCGGCACGTGAAAACAAAAA CAACCGGCCCGGCCCGGCACGTGAAAAGAAAAAATCGGCTCGGCCCGGGT GGAATATTCCCGGCAAAACTACCGTCCCGCTTAAACCCCCCTTCATCAGC ATTCGACCTCCTGACCTAGCTGTAACATCTAATCGAGGTTACCGACTAAA CAACCGGGGCGGCTCTGGGTGCATTTGAATCTTGGAAAATTTCAGCACAT GTAGACGTACATGGGGTGAGGCGTAGTTCTGACGAATAGCCTGTGCACTA TGCTTGGCCCCTGCTGCCTGCCCCCCCCCCCCCCCTTTGACCGTCCAGGC GATTCCGACATTTTCCTCGTCGGTGAAGCTATTAAAAAGTACCCCGAATT AGACCAGGTGTGCAACGCGCTATTACCAGAAGACGTCCAGCGAGAAGACG ACGGGACCGGAGCAGCAGCTGGGGAGGCGGGAGGCGCGGAACGCAGGGCG TCAGCCAAGCGCGAGGGCGAGCGGCTACACGGCATGAACCGTGCCGGCAA GAAGAAGGCTAAAAAGGACGAGAGGGCGCAGAGCGTGGCCGACGCTACGG AGAAGGCCGTGAGTTCGGCCATTGCGGGGATGGCACCGTTGCTGGCATCG ATGAAGCCGGACACCGCAAACGGGCGTCCCCAAACTGATGATCCGGAGCG CCAGGTTGCAGAAATCGTCCTCGCCGACGAATGCATGACCGCCCATGAAA AT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1336:9036..11387-

>mRNA_P-littoralis_Contig1336.4.1 ID=mRNA_P-littoralis_Contig1336.4.1|Name=mRNA_P-littoralis_Contig1336.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=564bp|location=Sequence derived from alignment at P-littoralis_Contig1336:9036..11387- (Pylaiella littoralis U1_48)
ATGGTCGCCCACTGCGATCCCAACGTAATCCACCAACCGAACATTTCCGC
GGAAAAGCTCTCCAAAATGTGGGCGGGGGTGAAGGCGAAGTGGAATCAGC
CCCACGCAAACTGGAGGGGCACGTCTGGCAACAATCAGCCTTGGGTGAAC
TTCTGCCAAGGCGATTCCGACATTTTCCTCGTCGGTGAAGCTATTAAAAA
GTACCCCGAATTAGACCAGGTGTGCAACGCGCTATTACCAGAAGACGTCC
AGCGAGAAGACGACGGGACCGGAGCAGCAGCTGGGGAGGCGGGAGGCGCG
GAACGCAGGGCGTCAGCCAAGCGCGAGGGCGAGCGGCTACACGGCATGAA
CCGTGCCGGCAAGAAGAAGGCTAAAAAGGACGAGAGGGCGCAGAGCGTGG
CCGACGCTACGGAGAAGGCCGTGAGTTCGGCCATTGCGGGGATGGCACCG
TTGCTGGCATCGATGAAGCCGGACACCGCAAACGGGCGTCCCCAAACTGA
TGATCCGGAGCGCCAGGTTGCAGAAATCGTCCTCGCCGACGAATGCATGA
CCGCCCATGAAAAT
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