mRNA_P-littoralis_Contig1334.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1334.5.1
Unique NamemRNA_P-littoralis_Contig1334.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: D7G2H3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H3_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 4.990e-48
Identity = 90/186 (48.39%), Postives = 114/186 (61.29%), Query Frame = 1 
Query:    1 WPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVT 558
            WP+ ETER  + + D R RTTE DWG VK D+VS G A RR+T  RH MC++ KGE C+E K KKR+RC HTL+VA+F+ + G  ST + +G       A+  ASSGG  LPRTPQ+      + Y  K+ DML Y+ R   PP  PS L  ++    RR  VSQ KCTCGG L    D +A +VT
Sbjct:   58 WPVVETERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMTSSRHFMCKAVKGEACTENKNKKRARCAHTLVVAVFSRI-GLDSTASSTGE----GGAAAGASSGGSALPRTPQVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLVVSQTKCTCGGELLPEADVNATLVT 238
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5KPP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPP3_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 4.750e-46
Identity = 106/258 (41.09%), Postives = 135/258 (52.33%), Query Frame = 1 
Query:    1 WPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR----SAKGEGCSEFKEK------------------------KRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            WP+ E ER  + + D R RTTE DWG VK D+VS G A RR++  RH MC+    S     CS+  +                          R    HTL+VA+F+ + G  S  + +G    A+DAS    SGG  LPRTPQ+      + Y  K+ DML Y+ R   PP  PS L  ++    RR  VSQ KCTCGG L    D  A +V        +EVERRKCG+CG  AWASD+WRKT VFNY+  +LV+L
Sbjct:  186 WPVVEVERHQYMVLDMRSRTTELDWGSVKFDQVSEGEASRRMSSSRHFMCKVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLXAHTLVVAVFSRI-GLDSMASSTGEGGAAEDAS----SGGSALPRTPQVFLDSDAESYCSKLADMLTYMRRLALPPTAPSGLARLSETPARRLMVSQTKCTCGGELLPEADVIATLV--------MEVERRKCGACGACAWASDNWRKTSVFNYNKYFLVDL 430
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5JLK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK4_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.870e-38
Identity = 92/230 (40.00%), Postives = 115/230 (50.00%), Query Frame = 1 
Query:    1 WPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSELPPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            WP+  TER  + + D R RTTE D G +K D+VS G A RR+T  RH MC+     G          RC       +F   +G      R G        S     G   LPRTP++      + +  K+ DML Y+ R   PP  PS L  ++    RR  VSQ KCTCGG L    D +A +VT        EVERRKCG+CG  AWASD+ RKT VFN  N +LV+L
Sbjct:   13 WPVVVTERHQYMVLDMRSRTTELDQGSIKFDQVSEGEASRRVTSSRHFMCKVRAHLG----------RC------CLFPHWVGFDGVEHRRGW------GSSGCFFGWLSLPRTPRVFLDSDAESFCSKLADMLTYMRRLALPPTAPSGLARISVTPARRLVVSQTKCTCGGELLPEADVNATLVT--------EVERRKCGTCGACAWASDNLRKTSVFNLKNYFLVKL 212
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5JPP3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP3_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 4.980e-20
Identity = 75/221 (33.94%), Postives = 109/221 (49.32%), Query Frame = 1 
Query:   73 WGCVKNDEVSPGS-------APRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCT-CGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            WG   ++  S G        A R++T  R LMC++ +G  CSEF EKK  +C+HTL+VA+    L +   +   G   +  D  G     G   PRT Q +  +    YR  + + L  +S  KFP   P  L        A A   +  SQ+ C+ CG    A E + + V   +T  P +  V V   +C +CG   +A+D+WR+TG+FNY+N YLVEL
Sbjct:  102 WGYAVSERRSDGKXXXXXXXASRKITAARGLMCKANRGGPCSEF-EKKNRKCLHTLVVAL---ALWQEEGMRDEGLGVEQVDVDGGRIPDG--TPRTAQKMLDKDAPAYRKCLANCLNTMSVIKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPA-ESQHSVVPTRLTEGPGMSKVNVHTNECETCGIHGFANDNWRETGLFNYNNSYLVEL 315
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5JWX4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWX4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.750e-16
Identity = 69/210 (32.86%), Postives = 99/210 (47.14%), Query Frame = 1 
Query:   82 VKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            V+ D   PG           LMC++ +G  CSE+ EKK  +C+HTL+VA+    L +   +   G      D  G     G   PRT Q +  +    YR  + + L  +S +KFP   P  L        A A   +  SQ+ C+  G     E++   V   +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVEL
Sbjct:  123 VEEDHCCPG-----------LMCKANRGGPCSEY-EKKDRKCLHTLVVAL---ALWQEEGMRDEGLGVGQVDMDGGRIPDG--TPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFHTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVEL 315
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5L0Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y4_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.590e-15
Identity = 62/184 (33.70%), Postives = 89/184 (48.37%), Query Frame = 1 
Query:  160 KGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            +G  CSE+ EKK  +C+HTL+VA+    L     +   G      D  G  +  G   PRT Q +  +    YR  + + L  +S +KFP   P  L        A A   +  SQ+ C+  G     E++   V   +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVEL
Sbjct:   13 RGGPCSEY-EKKNRKCLHTLVVAL---ALWHEEGMRDEGLGVGQVDVDGDRTPDG--TPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPTENQHTVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVEL 190
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5K6Y4_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 6.530e-15
Identity = 68/210 (32.38%), Postives = 95/210 (45.24%), Query Frame = 1 
Query:   82 VKNDEVSPGSAPRRLTPERHLMCRSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDASGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCT-CGGTLDALEDED--AKVVTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            V+ D   PG           LMC+  +G  CSE+ EKK  +C+HTL+VA+    L +   +   G      D  G     G   PRT Q +  +    YR  + + L  +S +KFP   P  L        A     +  SQ+ C+ CG            A  +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVEL
Sbjct:   40 VEEDHCYPG-----------LMCKVNRGGPCSEY-EKKNRKCLHTLVVAL---ALWQEEGMRDEGLGVGQVDVDGGRIPDG--TPRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANTSITYTTSQKTCSGCGRDFPTGNQYIVVATRLTEGPGMSKVNVHTNECETCGIHGLASDNWRETGLFNYNNSYLVEL 232
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: D7FR12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR12_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 6.190e-12
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 1 
Query:    1 WPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR 153
            WP+YETE  HF + D+R RT+E D+ CVK D V PG + RRLTP ++ MCR
Sbjct:  199 WPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 249
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: D8LSV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV9_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 6.740e-12
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 1 
Query:    1 WPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR 153
            WP+YETE  HF + D+R RT+E D+ CVK D V PG + RRLTP ++ MCR
Sbjct:  235 WPVYETEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 285
[Close]
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Match: A0A6H5JRE3_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE3_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 7.970e-11
Identity = 44/126 (34.92%), Postives = 63/126 (50.00%), Query Frame = 1 
Query:  334 PRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL----PPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKV---VTGAPNIVTVEVERRKCGSCGRPAWASDDWRKTGVFNYDNKYLVEL 690
            PRT Q +  +    YR  + + L  +S +KFP   P  L        A A   +  SQ+ C+  G     E++   V   +T  P +  V V   +C +CG    ASD+WR+TG+FNY+N YLVEL
Sbjct:   23 PRTAQKMLDKDAPAYRKGLANCLNTMSVYKFPENLPFGLGRRGATTNANASITYTTSQKTCSGCGRDFPTENQLTVVATRLTEGPGMSKVNVHANECETCGIHGLASDNWRETGLFNYNNSYLVEL 148
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1334.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7G2H3_ECTSI4.990e-4848.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPP3_9PHAE4.750e-4641.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLK4_9PHAE1.870e-3840.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPP3_9PHAE4.980e-2033.94Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWX4_9PHAE1.750e-1632.86CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L0Y4_9PHAE2.590e-1533.70CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K6Y4_9PHAE6.530e-1532.38CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FR12_ECTSI6.190e-1256.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSV9_ECTSI6.740e-1256.86Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JRE3_9PHAE7.970e-1134.92CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1334contigP-littoralis_Contig1334:14477..16152 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FR86
Preferred nameATG5
PFAMsAPG5
Model size691
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523
KEGG koko:K01880,ko:K08339
KEGG ReactionR03654
KEGG Pathwayko00970,ko04136,ko04137,ko04138,ko04140,ko04211,ko04213,ko04216,ko04621,ko04622,ko05131,map00970,map04136,map04137,map04138,map04140,map04211,map04213,map04216,map04621,map04622,map05131
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000272,GO:0000407,GO:0000422,GO:0000423,GO:0001101,GO:0001775,GO:0001817,GO:0001974,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002697,GO:0002700,GO:0002718,GO:0002739,GO:0002791,GO:0003008,GO:0003013,GO:0003015,GO:0003018,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005776,GO:0005829,GO:0005856,GO:0005929,GO:0005930,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006464,GO:0006497,GO:0006501,GO:0006807,GO:0006914,GO:0006950,GO:0006952,GO:0006995,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007423,GO:0007507,GO:0007552,GO:0007568,GO:0008015,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009251,GO:0009267,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009653,GO:0009791,GO:0009886,GO:0009888,GO:0009892,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0010039,GO:0010040,GO:0010150,GO:0010522,GO:0010605,GO:0010623,GO:0010639,GO:0010941,GO:0010959,GO:0012501,GO:0012506,GO:0014706,GO:0015980,GO:0016020,GO:0016032,GO:0016043,GO:0016052,GO:0016236,GO:0016237,GO:0018410,GO:0019058,GO:0019079,GO:0019222,GO:0019538,GO:0019725,GO:0019882,GO:0019883,GO:0022411,GO:0022607,GO:0030097,GO:0030098,GO:0030100,GO:0030139,GO:0030154,GO:0030217,GO:0030234,GO:0030424,GO:0030435,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0031056,GO:0031057,GO:0031090,GO:0031288,GO:0031323,GO:0031324,GO:0031344,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031982,GO:0032258,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033077,GO:0033365,GO:0033554,GO:0034045,GO:0034274,GO:0034613,GO:0034645,GO:0034727,GO:0034762,GO:0034765,GO:0035051,GO:0035065,GO:0035067,GO:0035069,GO:0035096,GO:0035150,GO:0035296,GO:0035973,GO:0036211,GO:0039689,GO:0039694,GO:0042110,GO:0042157,GO:0042158,GO:0042221,GO:0042311,GO:0042493,GO:0042592,GO:0042594,GO:0042692,GO:0042742,GO:0042981,GO:0042995,GO:0043005,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043269,GO:0043383,GO:0043412,GO:0043562,GO:0043583,GO:0043687,GO:0043934,GO:0044042,GO:0044085,GO:0044087,GO:0044093,GO:0044232,GO:0044233,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044275,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044804,GO:0044805,GO:0045058,GO:0045060,GO:0045061,GO:0045321,GO:0045335,GO:0045806,GO:0046649,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048646,GO:0048707,GO:0048731,GO:0048738,GO:0048771,GO:0048827,GO:0048839,GO:0048840,GO:0048856,GO:0048869,GO:0050707,GO:0050708,GO:0050764,GO:0050765,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050832,GO:0050878,GO:0050880,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051129,GO:0051146,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051279,GO:0051282,GO:0051409,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0051924,GO:0055001,GO:0055002,GO:0055006,GO:0055007,GO:0055012,GO:0055013,GO:0055015,GO:0055114,GO:0060033,GO:0060047,GO:0060255,GO:0060341,GO:0060491,GO:0060537,GO:0060548,GO:0060627,GO:0061061,GO:0061709,GO:0061723,GO:0061726,GO:0061739,GO:0061912,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070255,GO:0070257,GO:0070727,GO:0070925,GO:0071496,GO:0071500,GO:0071704,GO:0071840,GO:0072359,GO:0072665,GO:0075044,GO:0075071,GO:0080090,GO:0090066,GO:0090087,GO:0090239,GO:0090241,GO:0090693,GO:0090702,GO:0097014,GO:0097458,GO:0097708,GO:0097746,GO:0097755,GO:0098542,GO:0098588,GO:0098772,GO:0098805,GO:0099120,GO:0099402,GO:0099568,GO:0120025,GO:0120032,GO:0120035,GO:0120038,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901983,GO:1901984,GO:1902017,GO:1902115,GO:1902275,GO:1902494,GO:1902617,GO:1903008,GO:1903169,GO:1903320,GO:1903321,GO:1903530,GO:1904062,GO:1905037,GO:1905268,GO:1990234,GO:2000377,GO:2000378,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2001251
Exons3
Evalue4.11e-16
EggNOG OGsKOG2976@1|root,KOG2976@2759|Eukaryota
EC6.1.1.14
Descriptionprocess utilizing autophagic mechanism
Cds size690
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789614.0364509-CDS-P-littoralis_Contig1334:14476..146291680789614.0364509-CDS-P-littoralis_Contig1334:14476..14629Pylaiella littoralis U1_48CDSP-littoralis_Contig1334 14477..14629 +
1680789614.047486-CDS-P-littoralis_Contig1334:15052..154601680789614.047486-CDS-P-littoralis_Contig1334:15052..15460Pylaiella littoralis U1_48CDSP-littoralis_Contig1334 15053..15460 +
1680789614.0566556-CDS-P-littoralis_Contig1334:16022..161511680789614.0566556-CDS-P-littoralis_Contig1334:16022..16151Pylaiella littoralis U1_48CDSP-littoralis_Contig1334 16023..16151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1334.5.1prot_P-littoralis_Contig1334.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1334 14477..16151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1334.5.1

>prot_P-littoralis_Contig1334.5.1 ID=prot_P-littoralis_Contig1334.5.1|Name=mRNA_P-littoralis_Contig1334.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=230bp
WPLYETERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMC
RSAKGEGCSEFKEKKRSRCVHTLIVAIFTGVLGRGSTVARSGTTADADDA
SGSASSGGPVLPRTPQLLAKRSPDDYRLKVDDMLFYISRHKFPPIRPSEL
PPVTAEAGRRFKVSQRKCTCGGTLDALEDEDAKVVTGAPNIVTVEVERRK
CGSCGRPAWASDDWRKTGVFNYDNKYLVEL
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mRNA from alignment at P-littoralis_Contig1334:14477..16152+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1334.5.1 ID=mRNA_P-littoralis_Contig1334.5.1|Name=mRNA_P-littoralis_Contig1334.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1676bp|location=Sequence derived from alignment at P-littoralis_Contig1334:14477..16152+ (Pylaiella littoralis U1_48)
TGGCCGCTGTACGAGACGGAACGTCGTCATTTCGCCATCTACGACAACCG
GAAACGAACGACCGAGCAGGACTGGGGATGTGTGAAGAATGACGAAGTCT
CACCCGGGAGTGCGCCCCGAAGATTGACTCCTGAGCGGCACCTCATGTGC
AGGGTAAGGCTACGCAGAGATTACGCAGAGATGAAGAGCAAAGTTTGTGA
TGGGAATTGCCATTGACGTCGTATGTGAGCCTTTTTTTATTCACAGTACT
ACCGATTGGCAAGGAGGTTGTAGATGCGTAGATGCATGTGCGACATGTGG
GGCCTTTTGAATATGTGTATTCGTAAAGAGGAACTCCATAGACATATGAA
ACAGGGCGATACATCGGGGGCATGACTATCGCAGTCATTGAGACCCTCCT
ATCAAACCCCAGGTCAAATCCAGGTCATGCCTCCGTCCCCTGCCTTTTGG
TCGAAGTGGTAACTGGCGCATTCCTGTCGCTGCTCTTTTAGCCAAAACTT
TTGGTGCTTGTGCTATGCTAGTTTGACTTGTTGCTCATCCATCATGCTAC
ATACTCCTTCGCGCGCACGCCCTCAGTCCGCGAAGGGAGAGGGCTGCTCC
GAATTCAAGGAAAAGAAGCGCTCAAGATGCGTGCACACGTTGATCGTCGC
AATCTTCACGGGCGTCTTGGGGCGGGGTTCGACCGTTGCGAGGAGCGGGA
CGACGGCTGATGCAGATGATGCTTCTGGAAGTGCCTCGTCGGGTGGACCT
GTGTTGCCCCGTACTCCGCAGTTGCTCGCCAAGCGTTCCCCCGATGATTA
TCGTTTGAAGGTGGATGATATGCTCTTCTACATTTCGCGTCACAAGTTTC
CACCCATCCGCCCCTCGGAGCTGCCGCCAGTGACGGCAGAAGCGGGTAGA
AGGTTCAAAGTATCCCAACGCAAGTGCACCTGTGGGGGCACTCTGGATGC
TCTCGAGGACGAGGATGCAAAGGTCGTCACTGGGGTGAGTGGTGAAAGTA
TTGTGGGCAGCGCAGAACAAGCGTAATTCCGTGAGTCTGTGAGAATAGAG
AGTAGGACGCGGCATGGCGATAACCGGGTATCCCTTGCAGCCTCTCCAGG
GACGTGAACAGCCTGTTGCGACAATTCTTTAGGAGTCCTGGCAGTCTGCC
TGTGAGGTTCTCACGTGTAAATATCTTGGTTTGCTCACAGCTGCCAATTT
TTCGTCTGGTTCTCCGAGAAAAACCACTGGTTCCAATTTCGAACCCGTGC
CGTCCGCGCAGAAAAGCACAAAATGGCCTGGCCCCAGAAGGGTTCACCCG
CTGGCCCCGACGTTCGTAACCATGGGGACGGTGATGACGCTCCCCCCCCA
ATATAATGCAAAACACATTTGGATGCGTTTGTAATGTCGCACCTCGCTAT
TGTCTATGAACCCATGGAGGACTGAATACCGAGAAGGGGCATCCTCTTCC
CATAGTCGTGCATGGGATTCTAAAGACTTATCCTGGCGTGGTCTTAACAC
ACTTGTCGCCCCTCTCTAACCACCGACCTCACTCTATTTCTTATAGGCAC
CGAATATCGTGACAGTGGAAGTGGAGCGTCGGAAGTGTGGGTCATGTGGG
AGGCCCGCGTGGGCAAGTGACGACTGGCGAAAGACGGGGGTGTTCAACTA
CGACAACAAGTACCTCGTGGAGCTAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1334:14477..16152+

>mRNA_P-littoralis_Contig1334.5.1 ID=mRNA_P-littoralis_Contig1334.5.1|Name=mRNA_P-littoralis_Contig1334.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=690bp|location=Sequence derived from alignment at P-littoralis_Contig1334:14477..16152+ (Pylaiella littoralis U1_48)
TGGCCGCTGTACGAGACGGAACGTCGTCATTTCGCCATCTACGACAACCG
GAAACGAACGACCGAGCAGGACTGGGGATGTGTGAAGAATGACGAAGTCT
CACCCGGGAGTGCGCCCCGAAGATTGACTCCTGAGCGGCACCTCATGTGC
AGGTCCGCGAAGGGAGAGGGCTGCTCCGAATTCAAGGAAAAGAAGCGCTC
AAGATGCGTGCACACGTTGATCGTCGCAATCTTCACGGGCGTCTTGGGGC
GGGGTTCGACCGTTGCGAGGAGCGGGACGACGGCTGATGCAGATGATGCT
TCTGGAAGTGCCTCGTCGGGTGGACCTGTGTTGCCCCGTACTCCGCAGTT
GCTCGCCAAGCGTTCCCCCGATGATTATCGTTTGAAGGTGGATGATATGC
TCTTCTACATTTCGCGTCACAAGTTTCCACCCATCCGCCCCTCGGAGCTG
CCGCCAGTGACGGCAGAAGCGGGTAGAAGGTTCAAAGTATCCCAACGCAA
GTGCACCTGTGGGGGCACTCTGGATGCTCTCGAGGACGAGGATGCAAAGG
TCGTCACTGGGGCACCGAATATCGTGACAGTGGAAGTGGAGCGTCGGAAG
TGTGGGTCATGTGGGAGGCCCGCGTGGGCAAGTGACGACTGGCGAAAGAC
GGGGGTGTTCAACTACGACAACAAGTACCTCGTGGAGCTA
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