mRNA_P-littoralis_Contig1333.10.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 214 bits (544), Expect = 4.560e-61 Identity = 114/173 (65.90%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAA-PLEPQHYVKRPGFQEAVDYLVNPDEALAPYTVVGMGGG 516
AFKAL+EAA+GAAE Q+KLQ LVS+CAFLATVLIQHGR VG LA VQ+PI DFVATTNELA FA +WAKGG+CRA FCH DL+ LA +EE L +I DIA VD LEHHQ F L PP+ P+MAAVPA A L YV+R QE D L P+E+ APYTVVGMGGG
Sbjct: 116 AFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGG 288
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 209 bits (533), Expect = 6.070e-61 Identity = 111/173 (64.16%), Postives = 127/173 (73.41%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAA-PLEPQHYVKRPGFQEAVDYLVNPDEALAPYTVVGMGGG 516
AFKAL+EAA+GAAESQ KLQ LVS+CAFLATVLIQHGR VG LA V +PI DFV TTN+LA FA +WA GG+CRA FCH DL+ LAD+EE L +I DIA VD LEHHQ F L PP+ P+MAAVPA A L YV+R QE D L +P++ APYTVVGMGGG
Sbjct: 79 AFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGG 251
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.500e-59 Identity = 111/173 (64.16%), Postives = 126/173 (72.83%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAA-PLEPQHYVKRPGFQEAVDYLVNPDEALAPYTVVGMGGG 516
AFKAL+EAA+GAAE Q+KLQ LVS+CAFLATVLIQHGR VG LA VQ+PI DFV TTNELA FA +WAKGG+CRA CH DL+ LA +EE L +I DIA VD LEHHQ F L PP+ P+MAAVP A L YV+R QE D L P+E+ APYTVVGMGGG
Sbjct: 133 AFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGG 305
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.120e-55 Identity = 107/172 (62.21%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAAPLEPQHYVKRPGFQEAVDYLVNPDEALAPYTVVGMGGG 516
A KAL+EAA+GAAE ++K+Q LVS+CAFLATVLIQHGR VGALA V +PI DFV TTNELA FA +WAK G+CRA FCH DL+ LA +EE L I DIA VD LE HQ F LRPP +MAAVPA A P+ YV+R QE D L P+E APYTVVG+GGG
Sbjct: 91 ALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQEVADGLTAPEEPRAPYTVVGLGGG 262
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: A0A6H5JW28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW28_9PHAE) HSP 1 Score: 180 bits (457), Expect = 5.820e-52 Identity = 99/172 (57.56%), Postives = 114/172 (66.28%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAAPLEPQHYVKRPGFQEAVDYLVNPDEALAPYTVVGMGGG 516
AFKAL+EAA+GA ESQEKLQ LVSRC FL TVLI+H R V LA VQ PI DFV TTN+LAAFA FCH DL+TL D+EE L +I DI D LE+HQ+ + R L PP+ P+MAAVPA A P YV+R QE D L NP+E APY+ VGMGGG
Sbjct: 40 AFKALIEAAEGAVESQEKLQSLVSRCRFLTTVLIRHRRAVDPLAQVQTPIGDFVVTTNKLAAFAESGPGVASAGRFFCHRTDLSTLTDFEEGLRRIGADINSEDGLEYHQQSIGLGRALLPPSLPDMAAVPAGALALPHSYVERAAVQEVADGLTNPEEPRAPYSAVGMGGG 211
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.610e-51 Identity = 101/172 (58.72%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAAPLEPQHYVKRPGFQ-EAVDYLVNPDEALAPYTVVGMGG 513
AFK L+EAA+GAAESQ+KL+ L+SRCAFL TVLIQH R VG LA VQ+P+ DFVATTN+LAAFA WAKGG+CRALFCH D +TL D+EE L IS DIA VD LEHHQ + R LRPP P MA+VPA ++ RP A+ YL N AP + GM G
Sbjct: 88 AFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAG 259
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.890e-41 Identity = 93/173 (53.76%), Postives = 107/173 (61.85%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAAPLEPQHYVKRPGFQE-AVDYLVNPDEALAPYTVVGMGGG 516
AFKAL+EAA+GAAESQ+KLQ+LV RC L TVLIQH R VG LA VQ+P+ DF+ TTN L LFCH DL+TLAD+EE L I+ DIA VD LEHHQ M LRPP P+MAAVP A +V RP E A+DYL N AP + GM GG
Sbjct: 294 AFKALIEAAEGAAESQDKLQRLVPRCTMLTTVLIQHHRAVGPLAQVQKPMKDFIVTTNRL---------------LFCHRTDLSTLADFEEGLRGITNDIALVDGLEHHQLLLAMHGHLRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGG 451
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.860e-33 Identity = 82/172 (47.67%), Postives = 97/172 (56.40%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAAPLEPQHYVKRPGFQ-EAVDYLVNPDEALAPYTVVGMGG 513
AFK L+EAA+GAAESQ+KL+ L+SRC FL TVLIQH R VG L A+GG+CRALFCH DL+TL D+EE L IS DIA VD LEH Q + R LRPP P MA+VPA ++ RP A+ YL N AP + GM G
Sbjct: 93 AFKGLIEAAEGAAESQDKLKGLISRCPFLTTVLIQHDRAVGPL------------------------AQGGKCRALFCHRSDLSTLTDFEERLRTISNDIALVDGLEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAG 240
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE) HSP 1 Score: 117 bits (294), Expect = 3.430e-28 Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 1 AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESLGKISEDIAWVDRLEHHQEFSDMARDLRPPAPPNMAAVPAAAPLEPQHYVKRPGFQ-EAVDYLVNPDEALAPYTVVGMGG 513
AF AL+EAAQGA E E L++LV+ CAFL VLI+HG+ V L V +P+++FVATT ELA A A +C A CH D +A +++ L + DI + L+ + + M RP P+MA VPAAA P +VKR G + E + L D + APY ++GMGG
Sbjct: 89 AFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATDASGAPYVLLGMGG 260
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Match: D8LDU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU3_ECTSI) HSP 1 Score: 110 bits (274), Expect = 3.590e-26 Identity = 57/83 (68.67%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 52 KLQKLVSRCAFLATVLIQHGRVVGALAHVQRPISDFVATTNELAAFARKWAKGGRCRALFCHCIDLATLADYEESL--GKISE 294
+LQ LVSRCAFL TVLIQHGR VG+LA VQ+PI DFV TNELA FA + AKGG+CRA F H DL+ LAD+EESL GK E
Sbjct: 44 ELQSLVSRCAFLTTVLIQHGRAVGSLAQVQKPIQDFVVMTNELAGFAARRAKGGKCRAFFSHRPDLSALADFEESLLRGKYEE 126 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1333.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1333.10.1 >prot_P-littoralis_Contig1333.10.1 ID=prot_P-littoralis_Contig1333.10.1|Name=mRNA_P-littoralis_Contig1333.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=172bp AFKALVEAAQGAAESQEKLQKLVSRCAFLATVLIQHGRVVGALAHVQRPIback to top mRNA from alignment at P-littoralis_Contig1333:31944..32459+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1333.10.1 ID=mRNA_P-littoralis_Contig1333.10.1|Name=mRNA_P-littoralis_Contig1333.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=516bp|location=Sequence derived from alignment at P-littoralis_Contig1333:31944..32459+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1333:31944..32459+ >mRNA_P-littoralis_Contig1333.10.1 ID=mRNA_P-littoralis_Contig1333.10.1|Name=mRNA_P-littoralis_Contig1333.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=516bp|location=Sequence derived from alignment at P-littoralis_Contig1333:31944..32459+ (Pylaiella littoralis U1_48)back to top |