prot_P-littoralis_Contig1332.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1332.18.1
Unique Nameprot_P-littoralis_Contig1332.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length238
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1332.18.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 4.160e-28
Identity = 78/198 (39.39%), Postives = 107/198 (54.04%), Query Frame = 0 
Query:   22 LPLVTNDLSAMLLTTIGNCSKENSRHLAMVQNAAVYYQCLVTKRKIGTTNTEGRDAHAKQNYLDHTVPGFFAWWNKSCKLPIPTWLTPKLMGQSTLTDQTNRLYTVDGAIW---SKYSEAGKIIKRDFNLLWDSFRTADGELPSGQQETDAWGNLQDGLYYTWKKENEKVKMRNKRNKVAKNNPVVLTGGEGNQTLSG 216
            L L  N+ S  LL  + + +K+  +HL+++QNAA YYQCLVTKR+ GT +T+ RDAHA+ NY + TVP F  WW        P+WLT  LMG +T  D  +   TV    W   S Y  A +            F   DG+LPSG Q  D W NLQ  L++  ++   + K     N  AK+ P+VLTG +  +T +G
Sbjct:    6 LLLPRNEHSDDLLEYLSH-TKQTPKHLSLIQNAAAYYQCLVTKREAGTMSTQQRDAHARTNYKNFTVPSFLCWWKTVVIQTPPSWLTQDLMGMTTGNDSGSTTPTV----WFGPSTYRVAVRSGGTSTESGTGDF-LVDGDLPSGMQAEDIWENLQLYLWFEDRRTAGRKKEVAAANARAKSQPIVLTGDDDGETEAG 197
[Close]
BLAST of mRNA_P-littoralis_Contig1332.18.1 vs. uniprot
Match: A0A6H5KNK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK2_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 6.280e-5
Identity = 25/52 (48.08%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:   22 LPLVTNDLSAMLLTTIGNCSKENSRHLAMVQNAAVYYQCLVTKRKIGTTNTE 73
            L L  N+ S  LL  + + +K+  +HL+++QNAA YYQCLVTKR+ GT +T+
Sbjct:    6 LLLPRNEHSHDLLEYLSH-TKQTPKHLSLIQNAAAYYQCLVTKREAGTMSTQ 56
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1332.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J557_9PHAE4.160e-2839.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNK2_9PHAE6.280e-548.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1332contigP-littoralis_Contig1332:25292..27476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1332.18.1mRNA_P-littoralis_Contig1332.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1332 25292..27477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1332.18.1 ID=prot_P-littoralis_Contig1332.18.1|Name=mRNA_P-littoralis_Contig1332.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=238bp
VYAHAGNTRTPSLSSMEEIFPLPLVTNDLSAMLLTTIGNCSKENSRHLAM
VQNAAVYYQCLVTKRKIGTTNTEGRDAHAKQNYLDHTVPGFFAWWNKSCK
LPIPTWLTPKLMGQSTLTDQTNRLYTVDGAIWSKYSEAGKIIKRDFNLLW
DSFRTADGELPSGQQETDAWGNLQDGLYYTWKKENEKVKMRNKRNKVAKN
NPVVLTGGEGNQTLSGESTAARDKAQQQSEEEVAAARQ
back to top