mRNA_P-littoralis_Contig1330.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.240e-54 Identity = 96/219 (43.84%), Postives = 134/219 (61.19%), Query Frame = 2
Query: 83 ENTPISAPGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFGLSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
++ +S G+EK R+T+VL V DG+KV RII+ G+PF V G KS P+K NS+++E P R G+PA G+S GVQ+ SW D + W S + RP + QRP +LVLDDF+CH++E F LK ANT+V+ + GGLTP+ QPLDR +NK+ KR R++YT + K+ P RG V+TW K WE I+ T+++CFK
Sbjct: 75 KDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRK---NSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFK 290
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 189 bits (480), Expect = 6.080e-54 Identity = 98/219 (44.75%), Postives = 134/219 (61.19%), Query Frame = 2
Query: 83 ENTPISAPGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCF 721
++ IS GKEK R+T+VL V DG+KV PRII+KG+PF V G KS P+K NS+++E P R G+PA G+S GVQ+ SW D + W+S + RP + QRP +LVLDDF+CH++E F LK ANT+V+ + G LTP+ QPLDR +NK+ KR R +YT + K+ P RG V+TW KE WE + T+++CF
Sbjct: 141 KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRK---NSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCF 356
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.070e-53 Identity = 94/211 (44.55%), Postives = 129/211 (61.14%), Query Frame = 2
Query: 107 GKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCF 721
GKEK R+T+VL V DG+KV PRII+KG+PF V G KS P+K NS+++E P R +PA G+S GVQ SW D + W+S + RP + QRP +LVLDDF+CH++E F LK ANT+++ + GG+T + QPLDR +NK+ KR R +YT + K+ P RG V+TW KE WE I+ T+++CF
Sbjct: 10 GKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRK---NSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCF 217
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 186 bits (472), Expect = 3.210e-53 Identity = 98/220 (44.55%), Postives = 134/220 (60.91%), Query Frame = 2
Query: 83 ENTPISAPGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
++ IS GKEK R+T+VL V DG+KV PRII+KG+PF V G KS P+K NS+++E P R +PA G+S GVQ+ SW D + W+S + RP + QRP +LVLDDF+CH++E + LK ANT+V+++ GGLTP+ QPLDR +NK+ KR R +YT + K+ P RG V+TW KE WE I+ T+ S K
Sbjct: 141 KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRK---NSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRK 357
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 181 bits (460), Expect = 4.960e-53 Identity = 95/220 (43.18%), Postives = 132/220 (60.00%), Query Frame = 2
Query: 83 ENTPISAPGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
++ IS GKE+ R+ +VL V DG+KV PRI +KG+PF V G KS P+K NS+++E P R G+PA G+S GVQ+ SW D + W+S + RP + QRP +LVLDDF+ H++E F LK ANT+V+ + GGLTP+ QPLD +NK+ KR R +Y + K+ P RG V+TW KE WE I+ T+++CFK
Sbjct: 22 KDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRK---NSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFK 238
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 186 bits (472), Expect = 6.660e-52 Identity = 100/214 (46.73%), Postives = 132/214 (61.68%), Query Frame = 2
Query: 104 PGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFVG-GTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRP--GSAPRDQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWI----RDNFGLSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
PGKEK R+T+ L V DG KV RII+KG+PFV T G +P +NSI++E LP R+ G P GG+S GVQ+ SWCD + + W+ + RP GS R QR +LVLDDF+CH+++ F LK ANT+V+ + GGLTP+ QPLDR +NK+ KR R YT RD K++ P RG VATW K W I+ T+++CFK
Sbjct: 261 PGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP---KTGKLAPPGRGAVATWCKNAWASITPETVKTCFK 470
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 185 bits (470), Expect = 5.740e-51 Identity = 92/209 (44.02%), Postives = 128/209 (61.24%), Query Frame = 2
Query: 107 GKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFVGGTKKS-GAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
G EK R+T+VL V DG+KV PRII++G+PF+ T G +P +N +++E P R G+PA G+S GVQ+ SW D + W+S + RP + QRP +LVLDDF+CH +E F LK ANT+V+ + GGLTP+ QPLDR +NK+ KR R +YT + K+ P RG V+TW KE WE I+ T+++C K
Sbjct: 344 GNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSK 552
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 178 bits (452), Expect = 9.270e-49 Identity = 97/228 (42.54%), Postives = 132/228 (57.89%), Query Frame = 2
Query: 83 ENTPISAPGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRP--GSAPR-------DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
++ IS GKEK R+T+VL V DG+ V P II+KG+PF V G KS P+K NS+++E P R G+PA G+S GVQ+ SW + W+ + P GS R QRP +LVLDDF+CH++E F L ANT+V+ + GGLTP+ QPLDR +NK+ KR R +YT + K+ P RG V+TW KE WE ++ T+ +CFK
Sbjct: 295 KDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRK---NSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFK 519
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 172 bits (436), Expect = 1.030e-48 Identity = 91/204 (44.61%), Postives = 124/204 (60.78%), Query Frame = 2
Query: 131 VVLTVRGDGQKVRPRIIYKGSPF----VGGTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRPGSAPR-DQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG-LSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
+VL V DG+KV PRII+KG+PF V G KS P+K NS+++E P R G+PA G+S GVQ+ SW D + W S + RP + QRP +LVLDDF+CH++E F LK ANT+V+ + GGLTP+ QPLD +NK+ KR R ++T + K+ P RG V+TW KE WE I+ T+++CFK
Sbjct: 2 LVLAVMADGKKVSPRIIFKGTPFTSPTVSGNGKSTLPRK---NSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFK 200
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.220e-48 Identity = 102/245 (41.63%), Postives = 140/245 (57.14%), Query Frame = 2
Query: 11 IGSMPMRSIFHVILRADR*YFFLFENTPISAPGKEKLRYTVVLTVRGDGQKVRPRIIYKGSPFVG-GTKKSGAPKKPGQNSISYEHLPEKRTSFGYPAGGISLGVQKSSWCDGIQSEEWVSQDFMRRP--GSAPRDQRPSVLVLDDFRCHREEKFQKKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWI----RDNFGLSGKKVSAPSRGEVATWVKEVWEGISERTIRSCFK 724
+G+M + H +R + P S P + R+T+ L V DG+KV RII+KG+PFV T G +P +NSI++E LP R+ G P GG+S GVQ+ SWCD + + W+ + RP GS R QR +LVLDDF+CH+++ F LK ANT+V+ + GGLTP+ QPLDR +NK+ KR R YT RD K++ P RG VATW K W I+ T ++CFK
Sbjct: 241 LGNMDQTPVQHET-PVERLWKRPVRRMPASPPEE---RFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP---KTGKLAPPGRGAVATWCKNAWASITPETAKTCFK 477 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1330.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1330.7.1 >prot_P-littoralis_Contig1330.7.1 ID=prot_P-littoralis_Contig1330.7.1|Name=mRNA_P-littoralis_Contig1330.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp MGLSGLHAPPRVCPQRSASQRSRARRLQVPPGREVPKEAKGSGEHAGGDAback to top mRNA from alignment at P-littoralis_Contig1330:25777..26502+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1330.7.1 ID=mRNA_P-littoralis_Contig1330.7.1|Name=mRNA_P-littoralis_Contig1330.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig1330:25777..26502+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1330:25777..26502+ >mRNA_P-littoralis_Contig1330.7.1 ID=mRNA_P-littoralis_Contig1330.7.1|Name=mRNA_P-littoralis_Contig1330.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=366bp|location=Sequence derived from alignment at P-littoralis_Contig1330:25777..26502+ (Pylaiella littoralis U1_48)back to top |