mRNA_P-littoralis_Contig133.91.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: D7FGX3_ECTSI (Lipoyl-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX3_ECTSI) HSP 1 Score: 301 bits (771), Expect = 6.530e-93 Identity = 177/303 (58.42%), Postives = 215/303 (70.96%), Query Frame = 3
Query: 246 RADGHSTQRSHVTVGALRCASGDASQRSTSDFQ--RRCMQTSTPALAVEVLSTIAGGLRPAGPGATSGLPTWSNFSTSTDKPSKKAQGLMEGGGVDGVPLAAADVAQVAEPTKDEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQQAQETPAPARE---EHDNASEPVETFSWKNVLRDVLRLRQENKLSEDDASALMSLARNKDSELLQAFEGCFEGDEYKGEIDDELFLAQVIDIARTRTKK 1139
R +G + + S +G +R S +A + ++ Q R S +L S + GG R GAT FSTS++ G GVDG P+A A+VA+VA P K+EPRHAHIEMP+IT+AERVATLTSW V+VGDVI+VGDVVCEIELEQFSVGVKVET GFLAEILV+AGTEGVPVG DIGTIVHSEE+IALYQQAQ + +E + + ++P TFSWK+VL+DVLRLR LSE ++S LMSLARNKDSELLQAFEGCFEGD+YKG+IDD+LFLAQ DI +TR +
Sbjct: 71 RVNGRNGRISAAKLGTVRRLSNEARRGCSTQVQPPRSGGPMSALSLRPSPASVLVGGPRTRALGATLNGGVLCEFSTSSN-------GTTVEKGVDGAPVAEAEVAEVAMPAKEEPRHAHIEMPTITEAERVATLTSWKVQVGDVIEVGDVVCEIELEQFSVGVKVETPGFLAEILVEAGTEGVPVGTDIGTIVHSEEEIALYQQAQAHESEDKEVKADTEVIADPAGTFSWKDVLKDVLRLRNGGMLSEGESSTLMSLARNKDSELLQAFEGCFEGDKYKGDIDDDLFLAQAKDIFKTRRNR 366
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: A0A4D9CXA7_9STRA (Lipoyl-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXA7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.540e-19 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 3
Query: 582 EPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQQAQETPAP---AREEHDNASEPVETFSWKNVLRDVLRLRQENKLSEDD-ASALMSLARNKDSELLQAFEGCFEGDEYKGEIDDEL 1094
+P H + +P I + LT W GDVI+ GDVVCE+E++QF+VG++V+ G+LA ILV AGT GVP G + V+ E+ + A A E+ A E ++L+ + +L + + + + A L +LAR++D +LL+ FE FEG+ + E D +L
Sbjct: 73 DPPHFKLILPDIGQTSKTGNLTRWRKAEGDVIKNGDVVCEVEMDQFNVGMEVDDKGYLARILVPAGTRGVPAGEALAVFVYEEQYKDAFSSLPRYHAGGGGASEKSAGAEESEMAIDGVSLLKFLHKLVRNGSIKDKEFAQKLQTLARHEDKQLLRVFEASFEGEGPRREEDFDL 247
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: A0A6H5J6L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6L0_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 4.700e-14 Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 3
Query: 975 SEDDASALMSLARNKDSELLQAFEGCFEGDEYKGEIDDELFLAQVID 1115
S ++S LMSLARNKDSELL+AFEGCFEGDEYKG+IDD+LFLAQ +
Sbjct: 5 SAGESSTLMSLARNKDSELLKAFEGCFEGDEYKGDIDDDLFLAQAAE 51
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: A0A023G390_AMBTT (Putative dihydrolipoamide acetyltransferase (Fragment) n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023G390_AMBTT) HSP 1 Score: 78.2 bits (191), Expect = 4.380e-12 Identity = 34/91 (37.36%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 579 DEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQ 851
D P+H +++P+++ + T+ SW K GD + GD++CEIE ++ ++G + G+LA+IL+ AGT+ VP+G + +V+SEED+A ++
Sbjct: 70 DLPKHLRVQLPALSPTMEMGTIVSWEKKEGDRLGEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKDVPLGKLLCVLVYSEEDVAAFK 160
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: F0J940_AMBVA (Dihydrolipoamide acetyltransferase (Fragment) n=1 Tax=Amblyomma variegatum TaxID=34610 RepID=F0J940_AMBVA) HSP 1 Score: 73.9 bits (180), Expect = 1.880e-11 Identity = 33/91 (36.26%), Postives = 60/91 (65.93%), Query Frame = 3
Query: 579 DEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQ 851
D P+H I++P+++ + T+ SW K GD + GD++CEIE ++ ++G + G+LA+IL+ AGT+ VP+G + +V+ E D+A ++
Sbjct: 70 DLPKHLRIQLPALSPTMEMGTIVSWEKKEGDRLGEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKDVPLGKLLCILVYDEGDVAAFK 160
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: H3HAP3_PHYRM (Lipoyl-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAP3_PHYRM) HSP 1 Score: 74.3 bits (181), Expect = 2.240e-11 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 3
Query: 585 PRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQQAQETPAPA 878
P H + +PS++ ++ WN+K GD I GD+VCEIE ++ V + FLA+IL+ G E +PVG + +V E+DIA ++ + APA
Sbjct: 30 PTHEVVGLPSLSPTMETGNMSKWNLKEGDAISAGDIVCEIETDKAVVDYEATDDMFLAKILIPEGAENIPVGQPMMVVVEEEDDIAAFKDFKLEDAPA 127
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: A0A023FZT2_AMBPA (Acetyltransferase component of pyruvate dehydrogenase complex (Fragment) n=1 Tax=Amblyomma parvum TaxID=251391 RepID=A0A023FZT2_AMBPA) HSP 1 Score: 76.6 bits (187), Expect = 4.980e-11 Identity = 33/91 (36.26%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 579 DEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQ 851
D P+H +++P+++ + T+ SW K GD + GD++CEIE ++ ++G + G+LA+IL+ AGT+ VP+G + +V++EED+A ++
Sbjct: 33 DLPKHMRVQLPALSPTMEMGTIVSWEKKEGDRLGEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKDVPLGKLLCILVYNEEDVAAFK 123
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: UPI00188DE810 (dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1 n=4 Tax=Manduca sexta TaxID=7130 RepID=UPI00188DE810) HSP 1 Score: 76.6 bits (187), Expect = 5.800e-11 Identity = 36/109 (33.03%), Postives = 65/109 (59.63%), Query Frame = 3
Query: 579 DEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQQAQETPAPAREEHDNASE 905
D P H + +P+++ ++ SW K GD + GD++CEIE ++ ++G + G+LA+IL+ AGT+GVPVG + IV ++ D+A ++ ++ P + + A E
Sbjct: 64 DLPTHTKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVENQADVATFKDFKDDSPPIKPKRPQAKE 172
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: UPI001C204F0F (dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial isoform X1 n=2 Tax=Aricia agestis TaxID=91739 RepID=UPI001C204F0F) HSP 1 Score: 76.3 bits (186), Expect = 7.110e-11 Identity = 37/104 (35.58%), Postives = 65/104 (62.50%), Query Frame = 3
Query: 579 DEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQQAQE----TPAPA 878
D P H+ + +P+++ ++ SW K GD + GD++CEIE ++ ++G + G+LA+IL+ AGT+GVPVG + IV ++ D+A ++ ++ PAPA
Sbjct: 63 DFPSHSRVNLPALSPTMENGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVENQADVAAFKDFKDDSAAAPAPA 166
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Match: A0A131XJK2_9ACAR (Acetyltransferase component of pyruvate dehydrogenase complex (Fragment) n=8 Tax=Ixodidae TaxID=6939 RepID=A0A131XJK2_9ACAR) HSP 1 Score: 76.3 bits (186), Expect = 7.870e-11 Identity = 32/91 (35.16%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 579 DEPRHAHIEMPSITDAERVATLTSWNVKVGDVIQVGDVVCEIELEQFSVGVKVETTGFLAEILVDAGTEGVPVGADIGTIVHSEEDIALYQ 851
D P+H +++P+++ + T+ SW K GD + GD++CEIE ++ ++G + G+LA+I++ AGT+ VP+G + +V++EED+A ++
Sbjct: 89 DLPKHLRVQLPALSPTMEMGTIVSWEKKEGDKLGEGDLLCEIETDKATMGFETPEEGYLAKIIIPAGTKDVPLGKLLCILVYNEEDVAAFK 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.91.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.91.5 >prot_P-littoralis_Contig133.91.5 ID=prot_P-littoralis_Contig133.91.5|Name=mRNA_P-littoralis_Contig133.91.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=364bp MNHRGDQFCPFSTAVQMMYFVSTRNNESICSYQVSGVHLACCKGTGPWVNback to top mRNA from alignment at P-littoralis_Contig133:427043..432145- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig133.91.5 ID=mRNA_P-littoralis_Contig133.91.5|Name=mRNA_P-littoralis_Contig133.91.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=5103bp|location=Sequence derived from alignment at P-littoralis_Contig133:427043..432145- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig133:427043..432145- >mRNA_P-littoralis_Contig133.91.5 ID=mRNA_P-littoralis_Contig133.91.5|Name=mRNA_P-littoralis_Contig133.91.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1092bp|location=Sequence derived from alignment at P-littoralis_Contig133:427043..432145- (Pylaiella littoralis U1_48)back to top |