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Homology
BLAST of mRNA_P-littoralis_Contig133.67.3 vs. uniprot
Match: D7FGY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY1_ECTSI) HSP 1 Score: 286 bits (732), Expect = 1.040e-87 Identity = 178/342 (52.05%), Postives = 221/342 (64.62%), Query Frame = 2
Query: 38 MAKRCHAQLLLRRLPSFVQSIADFKHHEASLAILPDFQRDRTHDEFK-DPWIAVVSPLLLFTHCEKLLMNCRLEDQLDEKLLQVNVDLNKVGEGLMGEHEEQQQQQDPRMIDARLEVPPQKILCHSVHCGGMLALENVLEFLRQLSIAVKVRLLLLGVWRRLILLRRHEDGLSLIEQVEAACRNKDTLDHDLIIPLRKSLEKELRVATAAAKVIDLHETG-APLRHLVSV-MELRNAMIAWDRGHRAEGEFVIYRRLKAILLDTVEGNAARYGQQPAGNERTRILEEGSTKGLTRVEDREVGLSFSPPMAFAYSEGSLFDEAVVSGISGLDGNTGCFVFSIG 1054
M K C+AQLLL+RLPSFVQ+IADFKHHEA LAILPD+ R RTHDE + +PWIA +PLLLF E++LMN LEDQLDEKLL + DL V EG +GEHEEQQ+Q D M DAR CH GM L+ +LEFLRQ+ + VKVR LL WRR++L E G L E++EA R+KDTLDH LI+PL + +E ELRV + A + I L ET L+ V MELRNA+ W+RGH + V+ RR+KAIL+ AR G G+E +L+ GSTKGL SF P+ F+YS+G++ EAVV+GI GL+G T F FSIG
Sbjct: 1 MVKTCNAQLLLQRLPSFVQNIADFKHHEAGLAILPDYSRQRTHDELRGNPWIAACAPLLLFCSVERMLMNADLEDQLDEKLLDIECDLKMVAEGFIGEHEEQQRQMDV-MTDAR---QYSSCHCHRSEGVGMPPLDVLLEFLRQMGVVVKVRRHLLHAWRRVMLFGDVEFG-RLSERIEAVRRSKDTLDHPLILPLARMVESELRVVSFAVRAIHLQETSFVQLQEFVLCQMELRNAITTWERGHLGQ---VLCRRVKAILM-------ARNG----GHEGPPVLQRGSTKGL----------SFKSPLFFSYSDGTVSQEAVVNGIDGLEGTTTNFAFSIG 313
BLAST of mRNA_P-littoralis_Contig133.67.3 vs. uniprot
Match: A0A6H5JIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA1_9PHAE) HSP 1 Score: 240 bits (613), Expect = 1.400e-69 Identity = 149/297 (50.17%), Postives = 190/297 (63.97%), Query Frame = 2
Query: 44 KRCHAQLLLRRLPSFVQSIADFKHHEASLAILPDFQRDRTHDEFK-DPWIAVVSPLLLFTHCEKLLMNCRLEDQLDEKLLQVNVDLNKVGEGLMGEHEEQQQQQDPRMIDARLEVPPQKILCHSVHCGGMLALENVLEFLRQLSIAVKVRLLLLGVWRRLILLRRHEDGLSLIEQVEAACRNKDTLDHDLIIPLRKSLEKELRVATAAAKVIDLHETGAPLRH--LVSVMELRNAMIAWDRGHRAEGEFVIYRRLKAILLDTVEGNAARYGQQPAGNERTRILEEGSTKGLTRVEDR 925
K C+AQLLL+RLPSFVQ+IADFKHHEA LAILPD+ R RTHDE + +PWIA +PLLLF E++LMN LEDQLD+KLL + DL V EG +GEHEEQQ+ D M DAR CH GM +L+ +LEFLRQ+ + VKVR LL WRR++L E +SL +++EAA R+KDTLDH LI+PL + E ELRV + A + I L ET R ++ MELR+A+ W+ GH + V+ RR+KAIL+ AR G G+E L+ GSTK +R
Sbjct: 2 KTCNAQLLLQRLPSFVQNIADFKHHEAGLAILPDYSRQRTHDELRGNPWIAACAPLLLFCSVERMLMNADLEDQLDDKLLDIECDLKMVAEGFIGEHEEQQRHMDV-MTDARQHS---SCHCHRSEGVGMPSLDVLLEFLRQMGVVVKVRRHLLHAWRRVMLFGDVE-FVSLCQRIEAARRSKDTLDHQLILPLARMFENELRVVSFAVRAIHLQETSFVQRQDFVLCQMELRDAITTWEGGHLGQ---VLCRRVKAILM-------ARNG----GHEGPLALQRGSTKPTAPPHNR 279
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2057 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 9 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-11_001070.1 |
| Cds size | 1035 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789610.550917-UTR-P-littoralis_Contig133:323826..324811 | 1680789610.550917-UTR-P-littoralis_Contig133:323826..324811 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig133 323827..324811 - |
| 1680789610.6678426-UTR-P-littoralis_Contig133:338200..338237 | 1680789610.6678426-UTR-P-littoralis_Contig133:338200..338237 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig133 338201..338237 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789610.5607598-CDS-P-littoralis_Contig133:324811..324982 | 1680789610.5607598-CDS-P-littoralis_Contig133:324811..324982 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 324812..324982 - |
| 1680789610.5705888-CDS-P-littoralis_Contig133:325093..325222 | 1680789610.5705888-CDS-P-littoralis_Contig133:325093..325222 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 325094..325222 - |
| 1680789610.580316-CDS-P-littoralis_Contig133:325735..325955 | 1680789610.580316-CDS-P-littoralis_Contig133:325735..325955 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 325736..325955 - |
| 1680789610.5940914-CDS-P-littoralis_Contig133:326307..326375 | 1680789610.5940914-CDS-P-littoralis_Contig133:326307..326375 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 326308..326375 - |
| 1680789610.602287-CDS-P-littoralis_Contig133:326645..326761 | 1680789610.602287-CDS-P-littoralis_Contig133:326645..326761 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 326646..326761 - |
| 1680789610.6100516-CDS-P-littoralis_Contig133:329047..329181 | 1680789610.6100516-CDS-P-littoralis_Contig133:329047..329181 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 329048..329181 - |
| 1680789610.618708-CDS-P-littoralis_Contig133:329485..329560 | 1680789610.618708-CDS-P-littoralis_Contig133:329485..329560 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 329486..329560 - |
| 1680789610.6297963-CDS-P-littoralis_Contig133:329698..329773 | 1680789610.6297963-CDS-P-littoralis_Contig133:329698..329773 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 329699..329773 - |
| 1680789610.6423585-CDS-P-littoralis_Contig133:338153..338200 | 1680789610.6423585-CDS-P-littoralis_Contig133:338153..338200 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig133 338154..338200 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.67.3 >prot_P-littoralis_Contig133.67.3 ID=prot_P-littoralis_Contig133.67.3|Name=mRNA_P-littoralis_Contig133.67.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
MAKRCHAQLLLRRLPSFVQSIADFKHHEASLAILPDFQRDRTHDEFKDPW
IAVVSPLLLFTHCEKLLMNCRLEDQLDEKLLQVNVDLNKVGEGLMGEHEE
QQQQQDPRMIDARLEVPPQKILCHSVHCGGMLALENVLEFLRQLSIAVKV
RLLLLGVWRRLILLRRHEDGLSLIEQVEAACRNKDTLDHDLIIPLRKSLE
KELRVATAAAKVIDLHETGAPLRHLVSVMELRNAMIAWDRGHRAEGEFVI
YRRLKAILLDTVEGNAARYGQQPAGNERTRILEEGSTKGLTRVEDREVGL
SFSPPMAFAYSEGSLFDEAVVSGISGLDGNTGCFVFSIGVAKSM* back to topmRNA from alignment at P-littoralis_Contig133:323827..338237- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig133.67.3 ID=mRNA_P-littoralis_Contig133.67.3|Name=mRNA_P-littoralis_Contig133.67.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=14411bp|location=Sequence derived from alignment at P-littoralis_Contig133:323827..338237- (Pylaiella littoralis U1_48)
TAGAGGCCGAGAGTAATGAAGGGAGAGGAGACTTAACATGGCGAAGAGGT
GTCACGCGCAGCTGCTTCTCCGGAGACTGCCGAGGTATTCCGGAGATGTA
TGTATGTCCACGAAATAGTTCCCACAACTGCTGCTGTGCTCTAGTCCTGA
TTAGATCAGAAACACTACTGAAATCTCTGAACAAGCCAATCCACCGCAGC
AGTAGAGGGGTTGAGAAGTACACACACAGCACTCGACGACACACCAAACC
TGCCAGGTGCAAACACAGGGATTTTGGGGGGGAAACGACACAACAGGGTG
CCCCGTTCATTTTGCTACTCAACAGGGTGCATACTTTTCCCGAGCGTGAA
ACGAACCAAGCTGATTGGTCAAACCTCGATATTACCCTGTTGAGACGGAA
AATTGCCCTGATGCACCCCGCGAAGGCTACCTTTCTTCGGAACTACACCC
TGATTTTTGAAAAGCACCCTTTGTTGTGTCGGTAAATGAGACCCCTCCAC
CGGATATTCCTCCCGCAAGAATCACTTTCCGCACCCGCCAAAGGGCATCG
AATGTGAGATCTTCCACCGCGCCATACAAACAATGGTGAACACCATGACC
GGCACGACGGACCAATCGCATACTCCTCCACATCGACTCTTCAGGCTCTA
AACATACAATGGCACACTGCTGACCCAACAGATCAGAGTGCCGTTGCCAG
CACACAAACTGCAGATCCCCCGACAGCAAAAACAGAACACAATTGTTGAC
CCTGCTGCAAATACTCGTAGAGCACACAAGAAGAACAGAGGGTGGTGTTG
CGCCTTCTGTGTGTCCTTGTATAAAGTAAAGGGACAACGTGCGTCAAAGG
TGGGTGTGTGGTTCCTTCTCTGTTCAGTGCATCGATATTGGATGGGTCTC
CCTCTCACAGTAGTCGACTTTTATGCCTCCTGTTAGTTGTGTGTGCCTCC
TCATTTCCAGCACTGTTTGCTCTCTGGTTCCGAAGTCTATTTGTGTCTGC
ATTGCTGTGAGTCGCGTGTCCTGTCGTTACATGTGTCCGTCTGTTGTACT
GTCTAGCTTTGTCGTTATTTTGCGTTCTTCTCGTGTGCTCTACGAGTGCT
TGCAGCGGGGCCAACAAATGTGTTCTGTTTCGGGCCGGTGTCTTTGTTTA
CTGTCGGCGGATCTGCAGTTTGTGTGCTGGCAACGGCACTCTGATTTGTT
GGCACAGCATATGCCGTTGTATGTTTAGAGCCTGAAGAGTCGATGTGGAG
AGGTATGCGGTAGGTCCGTCGTGCCGGTCATCATGGTGTTTGCACGATTG
TTGTATCTTTGGCGGTGGAAGATCTCATATTCGATGCCCTTTTGCGGGTG
CGGAAACTGATTCCTGCGGGAGGAATATCCGGTGGAGGGGTCTCATTTAC
CGACACAACAAGGTGCTTTTCAAAAATCAGGGTGTAGTTCTGAAGAAAAG
TAACCTTCGCGAGGTGCACCCGGGCACTTTTCCGTCTCAACAGGGTGATT
TCGAGGTTTGACCAATCAGCTTGGTTCGTTTCACGCTCGGGGAAAGTATG
CACCCTGTTGAGTCGCATAATGACCAGGGTGCACCCTGTTGTGTCGTTTC
CCCAATTTTTGACCGTTTTCAAAATCAAAAACAAAATTGGATTTGGATTT
TGATTCCGTGTTGGGTCCGATCTGCTGCAGCTTTCGTTTATCCAAAATCA
AAAGCGGATGCATAAAAAACAGCAGTCACAGACAGATGGTGTGTGATATG
AGCATGCCGTGTCTCGATTCCAAGACAAGTGCGGGAGCTGTCATGCCTCA
AACGAAGAGCACGATGGTGCCCAACGTCGCCCTGACTCAGGCGCGTTGGT
AGTTCTTTATTTGGGATCGATAACCGAAAACCTCGGCAAAAGATGAGTAA
GAACGTGTTGCACGTGCCCTTTTTGGAGGTAGCGGCTGTGTCAGCTAGGC
AAACAGCAGTCGAGCAACAAACTTCCTCCACACTTCCACACACTTGAGTG
CTGCTCTCCGGGTTCTGGTCGGAATTCGCTCAAACACAGTGATCTGTATT
CTGCGTGACACCAGCTTTCTCCGGAGCTAGCACATGTGTACAGCCGGGGT
CTATACGTTGTGCTGTGGTCAGCTAAGCAAACATATGTAGTGTGCACCAT
GTGCTCCCGGAATGCACAGCAAACACCTCTCTGTCTCGTATTCTATATAG
GTCTGTATTCGTTTTTGAGCCGCGGTTTTGATCTATTGGCGGGAAGGAAA
CAATTTATTTCCCTTCGCGTTTCGGAAGAATAAAACTGAAATCCAAAACG
TGGTGCGGGCGGATGGATTGTTGACCTTTCAGTGACATATTCTTGAGTTT
GATTTTTGATTTTTGATTTTTGAATGGGCCTAAAACGCTTTGACAAGAGC
CACCCTCACCAGGGTGCACACTTTTTCCGAGCGTGAAACGAATCAAACTG
ATTGGACAAACCTCGAAATCACCCTGTTGAGACGGAAAAGTGCCCGGGTG
CACCCCGCGGAGGCAACATTTCTTCAGAACTACACCCTGATGTTTGAAAA
GCACCCTGTTGTGTTGGTAAATGAGACCCCTCCACCGGATATTCCTCCCG
CAGGGGTCACTTTCCGCACCCGCCAAAGAGCACCAAATGTGAGATCTTCC
ACCGCGCCATACAAACAATGGTGAACACCAGGACCGGCACGACGGACCAA
TCGCATACCCCTCCACATCGACTCTTCAGGCTCTAAATATACAATGGCAC
ACTGCTGTGCCAACAGATCAGAGTGCCGTTGCCAGCAAACAAACTGCAGA
TCAACCGACAGCAAGCATAGACACCAGTCCGCTGGGGCTGCCGCTACGGC
CCCCGTTGCGGCGGAAGAGCCAGAGTGCGGGTACTCAAATCGCGCGGGTA
GTGGCGGCGCTGGAGGGGGCACGCATGGCGATGGATGTCAGACCCGCCGC
CGCAGCTGTCACCCCACTGGCCGCCCCTTCCATACCTCCTTTGCGTGTTG
TGTGGCTACTTTGTCGTTTTCTGCGCTCTTCTTGTGTGCGCTACGAGTAT
TTGCAGCATGGCCAACAAATGCGTACTGTTTCGGGCTGGTGTCTCTGTTT
GCTGTCGGCGGATCTGCAGTTTGTTTGCTGGCAACAGCACTCGATCTGTT
GGCACAGCAATATGCCGTTGTGTGTTTAAAGCCTGAAGAGTCGATGTGGA
GGAGTATGCGGTAGGTCCGTCGTGCCGGTCATGGTGTTCACCATCGTATG
TTTGGCGGTGGAAGATCTCATATTTGATGCTCTTTTGACACATTTCAAAC
TCAGGATTCCTGCTTTAAAGTTCGACCGAAGCAGGAATTCCTGCTTTTTG
CAGTGTGAAATCTGACCTCGGAATTCCCGGTATGCAAGCCAGAAAGGTGG
AGTTAGATTTGGTCTAAAGATCCTTCCTGCAATAAAAAGCAGAGGGCCGG
TTTGGGCCAAAACCTATTTATACCATGAAGGATCTTTAGGATATTTACTG
TTCCGGAGTGATTGACACATCTTCTGGCGGTGATCTGGAGCTAAACAACT
CTGTACGTTGTGTATAGGTAGGGTAAGCAGGAGGGGTCCGGGAGACAGAG
CTGCCGATCCCAACCGACAGACAGAGCTGCCGACTCAGCATCGACTTCGA
AGTGTTGGATTACGAGTGGGAGCTCGGGGCCGAGCTCAGCCGCCTCAGCG
GTGCGGTTGAACGACGTGGGGCCGTACCCGAAGGTGATGTATTTAGAGCA
GCGCACCAATCAAAATGCCGAGTCTATGTGAGAGAATAGGGATCTCATGT
GTCTCGCGACCAACAGCAAGAAGTTATATCTTCTCTATCTGTTGTTGGGC
GCAGCATCGTTCACCGCGCACACGCTGCGACCAATCGTAAGGAGGAAAGG
TCACAGCTTCCTCAAGGCTGTCACGACAGCAGTAGTAGTAGTGTACATGA
GGGCTGCTTGCATTTCGGGGGTAGCGGATAGCCTCTCCACCATACTCGAT
AGAGCTTCGGCGTCAACGGACGACTGCTGTCCAGCAGCACCCCCCTGCCA
GCTGCAAACTTCATCATCCTCTCATTATCGAGGTTCAATGAACCCACCAT
CTGTGTGCCTCAAAAAACAGGGCTGCACCAGAGCGATCACAGACTGCATC
AGACTCTGTGGCACACGAGGAACGGTTATTTCATCAATTTGTTCATTTTT
TTATCGGGCTCGTCTCTTCGAAAGTGGTGTTCTGCGCGCCTCCTGGGCCA
AATTGATAGTCCGCGTACAATTCTTAGAAAAATCAAGCAGGAAGTGAGTT
TGAAATACAAACTCGGAACTGGGGCGGATTCCTTTGATTTGTAGCGGGAC
AGGAACAGCCAAATTTTACCGTGAACCGTGAAGCTCGAGTTTGAAATGTG
TCATTTGGCGGGTGCGGAAAGTGATTCCTGCGGGAGGAATATCCGGTGAT
CCGGTGGAGGGGTCTCATTTACCGACACAACAGGGTGCTTTTCAAAATCA
GGGCTCCACAGCGTTCCGCAGCAGCGTGAGCGATCTCAAAGCGTGTTTGT
CGCTCAGACACACATCGGGGCACACTCTCGTTCCGCCCTGGACCCTCGCC
GACATGTTTGGATGCGTGGTAACGCGCTTTCTCTCTGCGCTTCATCTCTG
CACCCGGGTCCGATCCAATCATCGTGTCAACTACTTCGTATCATTTTCGA
GAAAGCGTGAAGCAGTCTGCAGATTTTACGCTCTCTCGAGCCCTCTCAGG
TACCCACTTCGAGGTACTTGATTGAACGATGAAACAGTATACCAGGTATT
TGATTTTCGTCTGAGCTGCTGCCAGCGCTCCACACGCCCCGCAGTAGCAT
GAGCCACCTCAAAACGTGTCTCTCCCGCTGATACGCACATCGGGGCACAC
TCTCATTCGGCCCTGGACCCTCGCCGAAACCTCTCCTTGCATGGTAACAC
ACTTTGCTTTCTTTCTGCGCTTTATCTCTGCACCCGCGTGCTACATCATT
ATTCGTCGCACGAATTATCCTTTTCGTGAGCGTAAAGCAGTCTACAGATT
TCCCGTTCTTCTGGAGGCCTGACAAAGGTCTCCATTTCGGGTTACGTACT
TGATTAAACACCGCAATTTTTTTCTGCTGCCATCTCTCTATCAGCGCTCC
ACAGTGTACAGCGTCCCGAAGCAGTATGGGCGATCACAAAGCGCGTTTTT
CGCTCAACCGCACATAGGCGCACACTCTCATTCCGCCCCGAACCCTGGCC
GAGACCTCTCGTTGCTGGTACTCGGATTTCTCTCCGCGCCCCTCATTTTC
TATCGCTGAGCAACCTGCTCGCCTCTTTTGCTCGCCGGTACTCGGATTTC
CTCACAGCTCAGCAGATTTCCGACGCTCTCAAGGCCTGTGACGGGAGCCC
TCCATCTTCGATTCGGGACATATGTTTTGTTCCCTGGGGTCACACCGCCC
ACCACACCACCACCAGAAGAAGAGAAATTACCACTAAGACCAGCACTCGA
AGCGTGTCTCTCGCTTACAGGCACGTCAGGCCACAAGTTGCTACAGTATC
TGTGTACGTTCGCTGCCGTGTCTCTCTGTTTGTCGAGCAGTTTTTAATCA
AACGGAATTTTTACTCACAGTTCATCACAGTACGATACTGCTGGAAGGTA
AAAAGTGTAGTTTTCAGAATGAAACACGACGCCATTCACTCGGGACATTT
TCGAAACACACACACGCACAAATCTCTCAGCATGCAAGCTTGACGGACAG
AGCCCACGACCGCGGCTTGTAGTGTACCCAGCAGCACACCATGAGCCAGC
TGAAGTACTACTTTGTCTTGTTCATTCATGTCTCTATTATTACTGCTGCT
GCTGTACTGCTCGTTGTGACAGACAAACGGACAGCAGCACACAGCAGCAC
GAAAAAATTGACCAAAGAGTGTATGTAATAATTCGATATGTTGTGCTGTA
GGGGCACGTACGATGCATCACACATATATTTGCACTCATTCCGCTGCATG
TACCCCCGTGACCAACTTCCTCGCTCTTTCCTCTCTGGAAAAACAATATT
CCAAGTTTTCAAATTTTGAGTCACCGCATCTTCTACTTTTCTTCTGTCGC
TAATGACACACGCGTCACCAATTTTCAAGTTATCATCGATCACCACCACA
ACTTACTTCTGTTGTGCTGCTTCTGGCACGCTCAGCACCTTGCCCCCCCC
TACAGTCACACACGCACTCTTACTCTCTTCACACAATGTTGTTGGTTTTC
TTTTTTTTCATCCTCTCGTTATCTCTGTAGGAGACTGTACCACGTATTTT
TCTCAGTAGGAGAGTGTGTGTCATGTCTTGCTCCTTGGTGAAACTATGAT
TACATGTGAGTGCCAAAACACTTTGGCTCCACGACATGGACAAAACAAAT
CTCGAAGCCAGGTATCTTGGAGACGTTTCACTGAGCGTGTTGGTATAAGC
CGCAGAACCCTTTTATGTATTAATTAATTTGCTCTGATATGATATACGAA
GCACATGTCATGTCATATTTATTGTAAGCTGCTGCTGCTGCTGCTGTCGG
TTGTTGTTGCGGCTGATGATAAACACGGAATGACGTGACGACACACAAAC
GCAGACAACATATATGGACAGCAGCAGCAACATCTCTCCTCCTGTGCTGC
TACTGTACTTCTTAGGGTTGGTTGGTTGTGGCTGGATGTGTGTGTGTTTA
TCCGGTGTTTGGTCGTGATCACATAGAGAAAAATCCAAGCACAATATTTT
ATATCTCAAAAATCTATCGGTCGCCGTGTCGGAAGGAAGTCTGAGGAGTT
TCTGACAAGTTTCTGATCGAGAATTCACTGTCGGAAATCTCAAATCGTCA
CTGGGTAATTTTTGACTGCAAACGAGAGATGCTTTTTTTCTCTAGATCGG
GAACGGGCAGTTTTCGACAGGAAACACTGAGGGACTGGAAACGCCAAAAG
CCTCTTCGTTTATGTTGTTCGTTTTTCATGTTGAAGAATGACTTTTTCGA
TATGGGACACAAACACTGCTTCTCATGCTGTTAAAGAGGCCGCTTTCGAA
AGGATGTTTTTCGACATAATTTTCTGATCGACCCCGGACAGGACCCTTTG
TTGAAAAATTATTATTTATCGACAGGGTGTCGGATTGAAAAAAATTACTT
CGGATTGAAAAAAATTACTTCGTATGCATGTCGAGAAAGTTGAAAACGTT
TGAACACGCCGCAATACTCGCCCACAGTAATGGGGTGACGTACAAAGTAA
ATTTGTGAAACGATTGGTGCCTCGCGGTCTCGAGCGACCACGCGACAAGA
ACTACTGAAACAGCTCACAGAGGATGGCTTTGGCATAGCACTAGCTCCAT
TCCTTCAATAGGGACGGATGGAAATTCAAACCCGTGGCAGCACAAAAAAA
GCTAGTTCGCATGTTCGTTAATTCATGAACAAATGAATCAACAGCATTGA
CAAAACCGTCCCCCATTAGCTTTGTGTATAACCCTTTCCGTGTCGTGATC
GGCTCGAGGCCGCAAGTTGTCTGTAAGGTCAAAAAGATGTGTTCGTGGTA
TCAACCACATTCGGAAAAATAGAGACCTGCCCCTCCTGTCAACAGTTCTG
TTTTGCCTTGGCACCAGTTTGCGTTTCCGTTCATCACTGTCGAAAGGATG
TAGCCACAGCCATGACAAAGCCATCTGATGTGAGCCGTGTGTGTCGTCCT
TCTCGTGTCATGATATCTAGGGCCGCGAGGCATCGGCATGCTCGTAAAGG
TTGCTCGTGTCAAAAACGGAGCAAGACCTGCGGGTGGTGCTGCAGTCTGT
ATTTTTTACATGTTGCCACGAGCAAACTTTTTCTGCGAGCGCACCGATGC
CTTGCGGCCTCAAATGATCACCACACGAAAAGGACGATGCACAAGATCAC
GGAGGTCATCTAAGAGTGGCAGACGCAAATGCAAACCGGTGACAGCGCCA
ACCGAATGTAAACATCAAAGGGCTGCTGCTGTCAAATGCAAGGGACATTT
ACGAAGCCCTGTTGGAACAATCCCAAATGAAAAACGAACGGTTTTTAATA
CCCAAAAACGAGCCAAACAAGAAGTTCGAAGCACCTTATCGTGTTGAAAT
TTTGGTGCACCGCGACTCTGTAAACGGAAAGAGGCGGCGCAATATCCTCT
GGAGGCTTTCACCAACGGCCACTCTCGCGGGCGTCTTCCTACCAACTCAA
ACTGTATGTCTATTGTTTTTGGTGACCCTATAGTGCCATTTTGGACAAGC
GTCAATACCCCTCCTGAAGACACGTTCACTTTCAAAACAATCACAACGAT
AATCGGGAAAAAAGTCACCGTGTGCTCATCTGTCAGCCAGCAAAATCTAA
AACGTAAGTAGCTATGTGTTTTGTTTCCGAAGTCAACTATCTCACCCAGT
CGGTCTCAAACCCCCATGGCTCTCCATGTACTTATACCGCTGCCGATCAT
CGTCCGCATGAAAGTTTTGTCCAAAGCATCGCGGATTTCAAGCACCACGA
AGCAAGTCTCGCCATACTGCCGGATTTCCAGCGCGATAGGTGAGTTCGTT
GTCGTATGGCAAAACAGATACTTTTGGTGCAACGTCATACACTAACTCTC
CGGGATACCATACGTACTCAAGTGTACCGCCTTCTCACAGTCGGTCCTGG
TGTCTGTCTCATTTTTGCCACTGACAGGACACACGACGAGTTCAAGGATC
CATGGATAGCGGTTGTTTCGCCACTTCTTCTGTTTACGCACTGCGAGAAA
CTGTGAGTTTATGACGGAGACTTGCCTACACACAGCAGCAACACCATACC
CTGCCTGTTACAGTTTTGGCCCAAAACATGATTATTCATGTTATTCGAGA
GAATCCCTGGCTAACGGTAGGCCGCACGAGGAGTCGATGCTCTGAAAACG
TTGACGGGGGATCATTCGGTGCTGTGAAGGGTAACGTGGTGGATTGAGTT
GGGGAACTTGAATTCTGAACGATCGGGAGTAACTTCTTGACTTTCAAGGT
TTATGTTCAATATCTTGCATGCCATACGCTGCAATACGTGCTATAATATT
GCGCAGGTTAATGAATTGCCGCTTAGAGGATCAACTCGACGAAAAGTTAC
TCCAGGTCAACGTAGATCTGAACAAGGTCGGAGAGGGGCTCATGGGCGAA
CACGAGGAGCAGCAGCAGCAGCAAGACCCCAGAATGATCGGTGAACTTTT
TCGTCATTCTGCTCTTTGAAAATACATTGTTTGGCGGTACCGCCACTTGT
GTGGCTCGAAAACATCCGTTGGGCAGCAAAAGCCAGCAATGCTAGCACTC
ACGGCACGGGAAAAGCGTGTCGTAATCACCTGCGGATACCACACTTATTG
GTGTCCAGCAGGCTACAAATGAATGAGCACATCCATGAACTCCCGCTTTT
TAAAGCTTTTTTCTTCTCACCTTCACGTGTTCTCCTGCCGAACTAGTGTT
GATTAGATACGTATTCTACCCTCACCGAAACCGACGGAGGATTTTATTTT
TGAGTTCCAAACAAAAAAAGGCACAAGTTGAGCCCGAGGCGATGCTGCAC
TTGTTATTTCTTGAAGGCTGCGTGTGTACAAGATAAGCACGATTATGGTC
TACCGAATCAGAAGTCATTTTGGAAGAAGACTCTTGCCACGAAGGGTGAT
TTCAGGGACACGCGTGGTAGAAGACGAGCCGGGATTTCCCGTGGTGGAAC
GATGTCATTTCAACCCCACTTGCTGCTGCAGTTTCCAACCGGGAGATATT
TCTCCCGTCCCACTGTAGTTGCTAGTCCCTCCATGGGATTTAGATTTCGT
CCCACCTTAAAATATTTCACATTTCACAAAGAAAGCCTGGGTGATTATTG
CACCTTGAATGTTACTTACTATTTGATGTCATGCCATCGAGTTCGACCAA
CATGCTGGTGGTTTCCAGGTGTTTTGCTTCGGGAAAGGATCGATGAGTTG
AACAAATGTTGGAGAGAAAAAACACTTCACAACATCACTGGGAGAAAAAG
ACAACTAGGACAATTTTGTGCTTCTACATGTTGGTGATTTCTCTGTGTTA
CCCTGGTTATCTGCACGGCTCATTAAATGTGATGTCAAGATGATATTTGT
TTGATTGCCCCGAGAAAGCATATGAAAAATGTACAAAATGATAGAAAGAT
AAAAAATACCTATTATGCAGCATGGCATAAACGAGAGAATAGTAGGTAGA
GGAGTTGTCTGCTCAACAGCACGTAAACAACGACTCTTAGTATGCATATT
TATCGCAACATTTGGAAGCACAATTTGCTACTGCAGGACGGCGGTAAAGA
CCAGACAACGACCAGCCGGGCGGACACGAAGTACACATGCACACGTACCG
AAAGGGGTTTGTCTCAGTTAGGTGTTGTAGGGCCCGTCATGCAAGACACG
AGTTTTGTTGTCCACGAGTGTATTTTACACACTTCGCACATCAGTAGAGT
TCACTCACCCACATTCCTTCCACATTCCTTCGGAATGTCTCATCTCAACA
CCAAAACCGACATTGCTGCTTCACTTCACTCACTGCTGATGTGCAAAGGT
TTCTTCTCTATGCTTAACAAAAAAAAAGGCGGGTGTATGCCGTACTGTTG
GCGTCGAGGGGTGTACACGACGCGAGGTCCTGGCAACGTCGCACACACGC
AAACAAACCTACACCTTTAAGGTGGTGGTGCTAGTGCTGATGATTACCGA
CAAAAACATGTAAAAAAAAGGATGGAACTTCGGAGTACAGGACGAGGTAC
AAACTCAATATATAAGAAATGGAGAATACGTGCGTAGAGAAGAAATGATG
AAGGTGTTGAACGATGATCGGGCAAAACAAAAAATGTGCGAGAGCCGGAG
CTTGTGTATACGAAGCACACATACGTGCGTGCCGGAATCTCAACGCCACA
TATATTCAATAAAGGATTCCCCAAGAAAGCTGGTCCAGAGGTGGCTGTGT
TGCTGATGATTGTCTTTCTAGAATGCTGTGATGGAAACATGAGACTGCGA
ATGGCGTGGATTCGTACAAGAAAATTCCGCCAAACATAGATGTTTGTGCT
GCTGTTGTCCTGTTGAGCTGTCGTGTGTCTGTGTGGCGATTAGGGTGGAC
TGAACGCTGCGCGGGATTGTCGCAACGTCGAACACACATCATACTACGTC
GCACACCACAGTCAACACAGCAGCAGACCGAAGCTGTGCGGGTGCTGGTA
TTTATATTGATAGGTCTAAAAAAGGTTTCACACGGCGGGATTACCACCAA
TGAAAATATGTCCTGTTGAGAAGGGCGGGCGGATAATAAAGAAAAAAAAT
ACTTGGTTTTGAAATTGAACATATATGGTGTGGGATGCTGCAACGCGGAG
TGCTCGTGAATTCCGCTGCAGATTTGAAGGAAAACAAGACAGCAGGAGCC
CCCAAAACATTTCGGTGCCACATGTGACTCTTGAGGATTCACTGTATTTT
TTGTTACTGTAACTTCTTTCCTACAGATGCACGCCTGGAGGTTCCTCCAC
AGAAAATTTTATGTCACTCTGTGCACTGCGGTGGCATGTTGGCTCTGGAG
AATGTTCTGGAGTTTCTGCGTCAGCTAAGTATTGCCGTGAAGGTGAGAGT
GCCTATTTGAGCCAAGATACGAGTACACGGCTTTCCTGAAAAACGTCCAG
GTAGTCGGTCATCTTTCATCTGCCAACAAGGTGACTACGTACAAATCATT
AACATGGCCCCATAAGCCTCTTTAGCTTTGATTCAACTTGAAACAATCCT
CATCAACCCCGGAACACGACACGTGAAACCATTTTGCGTGTTTTTGCTTC
TCAATGCGTGCATATACTGGGTGCCTGTGAACCTGAAAATGATATTTCCG
CCGCTATATTAGGTTCGACTGCTGCTGCTGGGTGTATGGAGGCGATTGAT
ACTACTCAGACGTCACGAAGATGGCTTGAGGTAGGTGCCCTATCTGACCT
AACATTTTCAAACACCTGTCCTAGAGAGCACGTGAGCAGGAAGTAGAACG
GCGTTGATATGACTAGCCTCCACCAGGTGTTTGCCTCCATCATCTAGTGT
ACGTTGAGTCAGTCCACACCACACTGCCTATTAATATTAATAGTACGATT
GCTACCTACGCAAGCAGTTCCGTGACACATTGCGAATAATTCGAGAATGG
ATCCCGCGACCGACCGCCTGTGTAGGAGTGTTTGATGGTGATGTGTTGCG
GTTCCTAGACAACTAAAAAAGTGCGACGTTCCAAGAAGACCCCTCGACTA
ACACGAAACAGCGTTATTTCGATTCTCGGTAGCTTGATCGAACAGGTTGA
AGCAGCATGCCGCAACAAGGACACGCTCGACCATGACTTAATTATCCCCC
TGAGAAAGTCCCTTGAAAAGGAGTTACGGGTTGCGACCGCCGCCGCCAAA
GTGATCGATCTGCACGAAACAGGAGCCCCGCTCCGACACTTGGTTTCCGT
CATGGAGCTTCGCAATGCAATGATTGCGTGGGACCGAGGACATCGAGCGG
AGGTAAATCCCCCCTTCTGAAGTGCGCTCCCCAAATTGCAAATATTTCGC
GCACGCTGCGGTATCATCCAACACTGCAACAGCTCTCTCTCTCTCTGCGG
TGTATTTTGCCTTGTCACTCGGTGGCCTTGGCTGTTAGAAATAACCGGGC
AGCAACTAGATAGGTTATTTCTGTGACGTTGAGGAGTTGTGTGAAAGCTC
GAACGAGCTAGATCTTGATGTAGTTAGTATCTCCAGTATTGTTCTTCGCA
GACGAGGTATTTGAAACCTGGTGTGCCTCAGCCAAAAGTGGTATTTTCGA
TACTCGGTACAATATTTTCAGAATCTGCAACAATCTCAGGTTGGCTTCAG
AAGTGCGTTGTTTAAAAATTCCTGTGCCCGGATCGATGATGGAATCCGCC
ATTTCACCCCACGATGATGGTGGGTGTTTTGCCGCGTACCTTGCAGAGAA
TTTCCGCCATCCTTTCATTGAAGGAGCTGCATTTTAACCTTGTGTGACTG
TTGTTCTGGTTCTAGGGAGAATTCGTTATCTACAGAAGACTAAAGGCGAT
TCTTCTTGATACTGTGGAGGGGAATGCAGCAAGATATGGACAACAACCCG
CCGGGAACGAGAGAACACGAATATTGGAAGAAGGTTCGACCAAGGTGAGT
CCTGGTTTCATTCGGAGCGGAACGCTCCCTTGGATCTAATTTCATATTCG
GATGTTCTGCTTTACTCTCTGACAATCATCTATTTTTGGTACCTCGCCCC
TGCAGGGACTGACGCGCGTCGAGGACAGAGAAGTCGGGCTGTCGTTCAGC
CCTCCTATGGCTTTTGCGTACTCCGAGGGGTCACTGTTCGACGAGGCGGT
CGTGAGCGGCATCAGTGGTTTGGATGGGAACACGGGCTGTTTTGTTTTCA
GTATTGGGGTCGCGAAATCAATGTGACAAACTATTTCAGTTGCATCTAAT
CATGTTCATTTTGCGCATGCCATGTAAGGTAGCGTTGTTTTCTGCGCCTG
GAGATTGATTACGTGTGGGGTACAGGTCACGATGAACATCAGGATCACGA
TACAGCAGCGTTGTGAACATAGCTGAAGGCTGCGATGAACGGCAGGTGTC
ACACGTCTTTTGCCATTTCTCGTTGTACAGAGTTGTGCACATGAGCACCA
AGCAAGTACTCTGTGGGAAATTAAATCCAGCCAGGTGGCTGGCATTTCCA
GGGCCCCTGGGGAGGGAATAGCATACTCCCTGCCATTCGTATACCGTATT
GAAAACGGGCTACGTGGCGTTGCCCCCCAGAGGAGAAGTGCATCGGTGGA
CCAGACCTAGAGCTTTGGCTCTCCGACTATAAGCACTTCCTTCGAACAAT
ACTCTTGATAGTAGCTGACCTTTTTTGTGGTACCTGATCGTTGATCCTTG
ATCTGAGCGATGCGCCATGTATCAGTGAGAGATGCCGGACCGAAGTCGTT
TCCATTTGTCCCCAAGAGAGATAGAAAAGGTGCCCGCAGTTTTCTGATTG
GCCAAACTTTTGAAAGGAACTTTCTGATTGGTTGAAAAAATTGATGTCTT
TGTTCCGGCTTTCCGTTCGGCCGATCTTTTTTGAAAGGATTTTTTTTTCT
GATTGGCCAAAAATCCGTGGTCGACCGGTGACGTCATCCGCGGCGGCGTC
AATTTGTTGTAGAAAAATCCAAATATTTCAATCTGGCCGTGACTGGTGTG
ATGCTGCTGCTGTATCCGCTGATGGCTGATTGTCCAACTTTTACACCTAT
TTTACGTTCTGTTTTGCAACATTTTCTCTCATAACAACTACCCAGTAGTC
ACGTTACTCATGAGTTAGATGTCAAGCTTGTTGGTGGAGCAACCTGCCGG
CTACCATTATTCTGCGAATACGAACAATTTAAAGCCGGTGTCAATGAGTT
GCGCGGCATGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig133:323827..338237- >mRNA_P-littoralis_Contig133.67.3 ID=mRNA_P-littoralis_Contig133.67.3|Name=mRNA_P-littoralis_Contig133.67.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig133:323827..338237- (Pylaiella littoralis U1_48)
ATGGCGAAGAGGTGTCACGCGCAGCTGCTTCTCCGGAGACTGCCGAGTTT
TGTCCAAAGCATCGCGGATTTCAAGCACCACGAAGCAAGTCTCGCCATAC
TGCCGGATTTCCAGCGCGATAGGACACACGACGAGTTCAAGGATCCATGG
ATAGCGGTTGTTTCGCCACTTCTTCTGTTTACGCACTGCGAGAAACTGTT
AATGAATTGCCGCTTAGAGGATCAACTCGACGAAAAGTTACTCCAGGTCA
ACGTAGATCTGAACAAGGTCGGAGAGGGGCTCATGGGCGAACACGAGGAG
CAGCAGCAGCAGCAAGACCCCAGAATGATCGATGCACGCCTGGAGGTTCC
TCCACAGAAAATTTTATGTCACTCTGTGCACTGCGGTGGCATGTTGGCTC
TGGAGAATGTTCTGGAGTTTCTGCGTCAGCTAAGTATTGCCGTGAAGGTT
CGACTGCTGCTGCTGGGTGTATGGAGGCGATTGATACTACTCAGACGTCA
CGAAGATGGCTTGAGCTTGATCGAACAGGTTGAAGCAGCATGCCGCAACA
AGGACACGCTCGACCATGACTTAATTATCCCCCTGAGAAAGTCCCTTGAA
AAGGAGTTACGGGTTGCGACCGCCGCCGCCAAAGTGATCGATCTGCACGA
AACAGGAGCCCCGCTCCGACACTTGGTTTCCGTCATGGAGCTTCGCAATG
CAATGATTGCGTGGGACCGAGGACATCGAGCGGAGGGAGAATTCGTTATC
TACAGAAGACTAAAGGCGATTCTTCTTGATACTGTGGAGGGGAATGCAGC
AAGATATGGACAACAACCCGCCGGGAACGAGAGAACACGAATATTGGAAG
AAGGTTCGACCAAGGGACTGACGCGCGTCGAGGACAGAGAAGTCGGGCTG
TCGTTCAGCCCTCCTATGGCTTTTGCGTACTCCGAGGGGTCACTGTTCGA
CGAGGCGGTCGTGAGCGGCATCAGTGGTTTGGATGGGAACACGGGCTGTT
TTGTTTTCAGTATTGGGGTCGCGAAATCAATGTGA back to top
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