mRNA_P-littoralis_Contig133.66.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 502 bits (1293), Expect = 2.000e-173 Identity = 243/288 (84.38%), Postives = 261/288 (90.62%), Query Frame = 2
Query: 533 HIMRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLMFCPE 1396
+IM S RS RCSACL+WG+DFRHTRARTGELVR+FVDEAGIAD+FPGFQSIAAGTNLLALCK++GCLLELY+K E ARSRERVARKA Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVA +GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDAS+LSFRD+F KAN GK+PDWVVTSPPYKGAV FVKAALAVATKG ALKLPLSFLEPCADRGGWL + PPAVC+FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRL+FCPE
Sbjct: 15 YIMPSSRSGRCSACLEWGQDFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCPE 302
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 281 bits (720), Expect = 8.350e-89 Identity = 141/165 (85.45%), Postives = 149/165 (90.30%), Query Frame = 2
Query: 530 LHIMRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSR 1024
L IM+S SRRCSACL+ GEDFR TRARTGEL+R+FVDEAG+ADRFPGFQS AAG NL ALCK+SGCLLELYKKHE ARSRERVARKA QTPRHSR WSAAPEPVTH KRRR DRYCTSPEAVDALRDAVA +GCVLDMCGGP+DAVA FGGTCEVLTNDVSSR
Sbjct: 21 LQIMQSSSSRRCSACLECGEDFRQTRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 279 bits (713), Expect = 4.020e-87 Identity = 140/232 (60.34%), Postives = 169/232 (72.84%), Query Frame = 2
Query: 653 IADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDG 1348
+ D+FPG + + L LCK++GCLLEL+ ++ SR R+A + P +W+ APEPV KRR +DRYCTSP ++AL V+ SGCVLDMCGG +DAVA R TC+VLTNDV RLSP TNLDAS SF DDFL A+ G++PDW+VTSPPYKGA+AFVKAAL VA KG ALKLPLSFLEPCADR GWL PPA+C+ + RA+Y AH V+VGEFWGVWY G
Sbjct: 1 MGDKFPGLKCGDPSIDKLVLCKRAGCLLELFVLNQQRDSRAPTKRRAKRGP----KWTCAPEPVKQLKRRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAH-VRVGEFWGVWYPPG 227
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 279 bits (713), Expect = 3.860e-86 Identity = 150/286 (52.45%), Postives = 185/286 (64.69%), Query Frame = 2
Query: 554 SRRCSACLQWGE--DFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLS------PDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLMF 1387
S C ACL+ + +R R RT ++R FV AG+A++FPG + G + L CK++ C+L+ KH S +R +K + + W++APEP H KRR LDRYCTS AV+AL DAV SG VLDMCGGP+DAVA++ TCEV+TNDVSSRLS PDT+LDAS +F +FL ++P+ VV SPPYKGAV FVKAAL VA G ALK LSFLEPC DR WL PP VCVFLRRA YT HV +GEFWGVWY GG G++L+F
Sbjct: 10 SETCDACLREDDAAGYRQLRPRTMSMLRAFVRNAGLAEKFPGVMPLGVGIDSLVRCKRAECVLKQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYT-PEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 264 bits (674), Expect = 1.050e-81 Identity = 129/202 (63.86%), Postives = 152/202 (75.25%), Query Frame = 2
Query: 791 ASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLMFCPE 1396
A++TPRH++ APEP TH +RR LDRYCTSPEA+DA AV +GCVLDMCGGP DAVA R TCE+LTNDVSS DTNLDAS+ SF +DFL A SGKRP+WV TSPPY A+ FVKAA+++ATKG K+ + FLEPCAD GGWL PP++CVFLRRAKYT A++ K EFWGVWY SC N +RL+FCPE
Sbjct: 2 AARTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRALTFVKAAMSLATKGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNR--TRLVFCPE 201
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 253 bits (645), Expect = 4.250e-77 Identity = 126/210 (60.00%), Postives = 151/210 (71.90%), Query Frame = 2
Query: 662 RFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSP-----DTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFL 1276
+FP + +G L LC + CLL+LY K +++ R +A Q RH +W+ PEP H KRR LDRYCTSPEAV+AL AV GCVLDMCGGP DA+A R G TC+V+TND+S+RLSP DTNLDAS+ SF DFL A G+RPDWV+TSPPYKGA+ +VK+AL++A KG ALKLPLSFLEPCADRGGWL PPAVCVF
Sbjct: 12 KFPSLNAEGSGMYRLVLCNRPDCLLQLYIKQLREKNKPRTKLRAQQLARHGAKWTGIPEPRKHIKRRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 245 bits (626), Expect = 2.360e-75 Identity = 123/146 (84.25%), Postives = 130/146 (89.04%), Query Frame = 2
Query: 692 GTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPP 1129
G+NL+ALCK+SG LLELYKKHE ARSRERVA KA QTPRHSR WSAAPEPVTHDKRRRLDRYCTSP AVDALRDAV GCVLDMCGGPE AVA FGGTCEVLTNDV SRLSPD+NLDAS+LSF DFLKA+ GK+PDWVVTSPP
Sbjct: 2 GSNLVALCKRSGYLLELYKKHERARSRERVAWKAEQTPRHSRTWSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGKQPDWVVTSPP 147
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.740e-73 Identity = 127/203 (62.56%), Postives = 149/203 (73.40%), Query Frame = 2
Query: 605 RARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESA----RSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLP 1201
R RT VR FVDE GIA++FP G + L LCK+SGCLL+LYKKHE RS++R ARKA+QTPRH+ PEP TH KRR LDRYCTSPEAV+AL AV+ +GC+LD+CGGP DAVA R G TCEVLTNDVSS DTNLDAS+ SF DDF A+SGKRPDWVVTSP YK A+ FVKAA+++AT+G + P
Sbjct: 2 RPRTSSQVRAFVDEIGIANQFPALDEGGLGASTLTLCKRSGCLLQLYKKHEQRMSKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGKRPDWVVTSPSYKSALTFVKAAMSLATRGVTVPAP 204
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5KJ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ32_9PHAE) HSP 1 Score: 238 bits (608), Expect = 9.690e-72 Identity = 117/141 (82.98%), Postives = 129/141 (91.49%), Query Frame = 2
Query: 533 HIMRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAKSGCVLDMCGG 955
+IM S RS RCSACL+WG+D RHTRARTGELVR+FVDEAGIAD+FPGFQSIAAGTNLLALCK++GCLLELY+K E ARSRERVARKA Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVA +GCVLDMCGG
Sbjct: 70 YIMPSSRSGRCSACLEWGQDIRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGG 210
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.940e-67 Identity = 109/151 (72.19%), Postives = 116/151 (76.82%), Query Frame = 2
Query: 944 MCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLSFRDDFLKANSGKRPDWVVTSPPYKGAVAFVKAALAVATKGAALKLPLSFLEPCADRGGWLAETPPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLMFCPE 1396
MCGGPEDAVA FGGTCEVLTNDVSSRLSP A+ GK+PDWVVTSPPYKGAV FVKA LAVA KG AL+LPLSF +PCADRG WL + PP +C FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRL+FCPE
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSP-----------------AHPGKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWYTDGG-CGKSGGSRLVFCPE 133 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.66.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig133.66.2 >prot_P-littoralis_Contig133.66.2 ID=prot_P-littoralis_Contig133.66.2|Name=mRNA_P-littoralis_Contig133.66.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp MRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAback to top mRNA from alignment at P-littoralis_Contig133:321344..323262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig133.66.2 ID=mRNA_P-littoralis_Contig133.66.2|Name=mRNA_P-littoralis_Contig133.66.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1919bp|location=Sequence derived from alignment at P-littoralis_Contig133:321344..323262- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig133:321344..323262- >mRNA_P-littoralis_Contig133.66.2 ID=mRNA_P-littoralis_Contig133.66.2|Name=mRNA_P-littoralis_Contig133.66.2|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig133:321344..323262- (Pylaiella littoralis U1_48)back to top |