prot_P-littoralis_Contig133.59.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig133.59.2
Unique Name	prot_P-littoralis_Contig133.59.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	415

Homology

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BLAST of mRNA_P-littoralis_Contig133.59.2 vs. uniprot
Match: D7G8K9_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K9_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 4.290e-70
Identity = 160/343 (46.65%), Postives = 211/343 (61.52%), Query Frame = 0

Query:   83 SGGNAAATPHEQQVAVGDSTT-----RPVLNWWRSQRLTGSDG-GVVPAAGISPNRPSPGRPTERNRPESGSCSPALHTTSRKRDVQEESWTKAQLYSLRRSQADTALSVSDFWGAVASNVQDRDPQDCQQKWFEHFATPRGRRRKASKQGSPSRSAGTALLSDNTSRSSREVTANAHESPERINQPPERGNGDDLFEATPMRGRRQVGTQPTGGELEAKTPRTPAGPGVPIDYTSAVEAIPR-DGADYNQRGISKTYI--MSKKMRRRASQLGKNSMVTRERAKKTPYGS-AGRSFHAAAISQGHQLKVSVTSLGDVSLASTCNDEDSVC-LSGSCETSDDE 414
            S   A A+ HE+    G  +       PVL+WWRSQRLT +   GVV AA     +PS G   + +     +C   L T  R  + +EE WTKAQ++SLRR+QA+TA S S FW AVA NV  R+PQ+CQQKWFEHFATPRGR R AS +G  S+  GT   SD+ SR++    A A+ S     Q PERG  DDLF+ATP+RG R+ G Q  G  L+ +TPRTPAGPG P   +SA++A P  + ADY +RG+S+ Y+  +SK+MR+ A Q GKN    R +A + P    AGR+ H AA+S GH+L+V V+  G VS+ ST N +D    +S   E+ DD+
Sbjct:    5 SNARAVASSHERHDVAGRDSNIPRGAAPVLDWWRSQRLTKTPSVGVVGAARFPLGQPSTGNHADMD----SAC--RLKTVGRDANGEEEPWTKAQMHSLRRAQAETAPSTSAFWSAVACNVDGRNPQECQQKWFEHFATPRGRSRNASARGCISQRIGTPP-SDDMSRNT--PAAAAYRSLAPAKQTPERGASDDLFQATPIRGHRRFGVQARGDVLDTRTPRTPAGPGAPCRDSSALDAAPGCEDADY-KRGVSRKYVKALSKRMRKGALQSGKNRKAARGQAIRKPASVVAGRTTHTAAVSGGHKLQVCVSGSGAVSVQSTYNSDDGASSVSDDVESDDDD 337

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig133.59.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig133.59.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G8K9_ECTSI	4.290e-70	46.65	Myb-like domain-containing protein n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 159..229 e-value: 6.7E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..163
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 159..213 score: 6.841111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig133	contig	P-littoralis_Contig133:218639..219883 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig133.59.2	mRNA_P-littoralis_Contig133.59.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig133 217581..219962 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig133.59.2 ID=prot_P-littoralis_Contig133.59.2|Name=mRNA_P-littoralis_Contig133.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=415bp
MKRSGRTSIPVLDSSLPAPGLADRENPLLTIKQKSRALGGKGFHPRTRSC
KDASRGKSMACAQHRGALTARRGENEGQRDVSSGGNAAATPHEQQVAVGD
STTRPVLNWWRSQRLTGSDGGVVPAAGISPNRPSPGRPTERNRPESGSCS
PALHTTSRKRDVQEESWTKAQLYSLRRSQADTALSVSDFWGAVASNVQDR
DPQDCQQKWFEHFATPRGRRRKASKQGSPSRSAGTALLSDNTSRSSREVT
ANAHESPERINQPPERGNGDDLFEATPMRGRRQVGTQPTGGELEAKTPRT
PAGPGVPIDYTSAVEAIPRDGADYNQRGISKTYIMSKKMRRRASQLGKNS
MVTRERAKKTPYGSAGRSFHAAAISQGHQLKVSVTSLGDVSLASTCNDED
SVCLSGSCETSDDE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb