prot_P-littoralis_Contig133.56.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig133.56.4
Unique Nameprot_P-littoralis_Contig133.56.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length157
Homology
BLAST of mRNA_P-littoralis_Contig133.56.4 vs. uniprot
Match: D7FIA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA2_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 2.770e-79
Identity = 126/156 (80.77%), Postives = 138/156 (88.46%), Query Frame = 0
Query:    1 MEHCNAAVTHVRSQAAAIRKTTSEYLKGELLRGEQLANGDPQWSSILSGFHVAANQVVELAEEIDPMLSFFAYQPLRATAKPGDIPMFLSTKLMPRSDSDFATKNEEPEGVVTSRSHIETVEHFNESVDDITNFFSDYVAADDVLGKLVSFSRNTR 156
            MEHCNAAVTHVRS+AAAIRKTTSEYLKGELLRGE+L NGDP+W SILS F VAANQVVELAEE+DP+L+FFAYQPLRATAKPGDIPMFLSTKLMPRSDS  A ++E  EG V SRSHIE VE FN+SVDDI+NFF+D V ADDVL KLVS S +TR
Sbjct:    1 MEHCNAAVTHVRSKAAAIRKTTSEYLKGELLRGERLTNGDPKWPSILSSFDVAANQVVELAEEVDPVLNFFAYQPLRATAKPGDIPMFLSTKLMPRSDS--AKRDERSEGSVGSRSHIEAVEQFNDSVDDISNFFNDSVGADDVLSKLVSLSGSTR 154          
BLAST of mRNA_P-littoralis_Contig133.56.4 vs. uniprot
Match: A0A835YKI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 5.560e-18
Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    1 MEHCNAAVTHVRSQAAAIRKTTSEYLKGELLRGEQLANGDPQWSSILSGFHVAANQVVELAEEIDPMLSFFAYQPLRATAKPGDIPMFLSTKLMPRSDS 99
            ME    A+  VR+QA AIR T + +++ EL       NG+P W  +++ F V A Q+ +LAE++DP+L FFA+QP+R TA P  IP+FLST+ +   D+
Sbjct:    1 MESSIPALNAVRNQANAIRTTLTHHIERELRM-----NGNPSWPELINSFQVVARQLADLAEDVDPVLQFFAFQPVRPTANPAHIPLFLSTRPLAEMDA 94          
BLAST of mRNA_P-littoralis_Contig133.56.4 vs. uniprot
Match: A0A7S2LT75_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LT75_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 6.280e-5
Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   14 QAAAIRKTTSE--YLKGELLRGEQLANGDPQWSSILSGFHVAANQVVELAEEIDPMLSFFAYQPLRATAKPGDIPMFLSTKLMP 95
            QA+ +RK   E  Y+     R E        W ++L   + A NQ   + + I+ +L  F Y P + TA PGDIP+FLS+KL P
Sbjct:   33 QASILRKNLLEWDYVLHTPARAEN-------WPTMLGRLNAALNQAGNVDDGIEDLLEHFVYLPKKVTANPGDIPVFLSSKLAP 109          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig133.56.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FIA2_ECTSI2.770e-7980.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKI8_9STRA5.560e-1843.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2LT75_9STRA6.280e-536.90Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig133contigP-littoralis_Contig133:189257..217433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig133.56.4mRNA_P-littoralis_Contig133.56.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig133 188507..217564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig133.56.4 ID=prot_P-littoralis_Contig133.56.4|Name=mRNA_P-littoralis_Contig133.56.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=157bp
MEHCNAAVTHVRSQAAAIRKTTSEYLKGELLRGEQLANGDPQWSSILSGF
HVAANQVVELAEEIDPMLSFFAYQPLRATAKPGDIPMFLSTKLMPRSDSD
FATKNEEPEGVVTSRSHIETVEHFNESVDDITNFFSDYVAADDVLGKLVS
FSRNTR*
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